Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anoplophora_20glabripennis_20[refseq_20GCF_5F000390285.1_202013-05- 14] 10,474 sequences; 707,727,967 total letters Query= NC_028491.1 Length=98392 Score E Sequences producing significant alignments: (Bits) Value seq747 109 3e-19 seq38 105 4e-18 seq365 95.1 8e-15 >seq747 Length=644639 Score = 109 bits (120), Expect = 3e-19 Identities = 163/229 (71%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 34479 GCCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGA 34538 |||||| || | || || ||||| || || || |||||||| || || || || || Sbjct 462491 GCCGCCCCTCAACCGTAAAACCAAGTGAAGGGTTGATTCCTTTTGGATATTGTAGTCAGA 462550 Query 34539 AAGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGG 34598 ||| || || | |||||||||||||| || || || || ||||||||||| || || || Sbjct 462551 AAGAGTACGTCCATCTTCAAGTTGTTTGCCTGCGAAGATCAAACGCTGTTGATCAGGAGG 462610 Query 34599 CACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACG-ATAAAATTGTGTCTTCGCTCTCCA 34657 | ||||| ||||| ||| ||| | ||||||| | |||||||| ||| | Sbjct 462611 AATGCCCTCTTTGTCCTGGAT-TTTAGCTTTAACGTTTTCTATTGTGTCAGAAGGCTCGA 462669 Query 34658 CTTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706 | || | || || |||||||| || | ||||| || ||||| ||||| Sbjct 462670 CCTCTAGCGTGATAGTTTTACCCGTGAGGGTTTTTACGAAAATTTGCAT 462718 Score = 102 bits (112), Expect = 5e-17 Identities = 162/230 (70%), Gaps = 2/230 (1%) Strand=Plus/Plus Query 34478 CGCCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTG 34537 ||||||| || | || || ||||| || || || |||||||| || || || || | Sbjct 465966 CGCCGCCCCTCAACCGTAAAACCAAGTGAAGGGTTGATTCCTTTTGGATATTGTAGTCAG 466025 Query 34538 AAAGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCG 34597 || | || ||| | ||||| ||||||||||| || || || ||||||||||| || || | Sbjct 466026 AAGGAGTGCGCCCATCTTCTAGTTGTTTACCCGCGAAGATCAAACGCTGTTGATCGGGAG 466085 Query 34598 GCACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACG-ATAAAATTGTGTCTTCGCTCTCC 34656 | | || || ||||| ||| ||| | ||||||| | |||| ||| ||| Sbjct 466086 GAATACCTTCTTTGTCCTGGAT-TTTAGCTTTAACGTTTTCTATTGGGTCAGAAGGCTCG 466144 Query 34657 ACTTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706 || || | || || || ||||| |||| ||||| || ||||| ||||| Sbjct 466145 ACCTCTAGCGTGATGGTCTTACCCGTTAGGGTTTTTACGAAAATTTGCAT 466194 Score = 89.7 bits (98), Expect = 3e-13 Identities = 158/228 (69%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 34480 CCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAA 34539 || ||||| | |||||| ||||| || || || |||||| || ||||| || || || Sbjct 453161 CCACCTCTCAAACGCAATACCAAGTGAAGGGTAGACTCCTTCTGGATGTTGTAGTCAGAC 453102 Query 34540 AGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGC 34599 | ||| || | ||||||||||||||||| || || || | ||| || || || || || Sbjct 453101 AATGTACGTCCATCTTCAAGTTGTTTACCAGCGAAGATCAGACGTTGCTGATCTGGAGGA 453042 Query 34600 ACTCCCTCCTTGTCTGTGATCTTTTGTTTTAAC-GATAAAATTGTGTCTTCGCTCTCCAC 34658 | ||||| |||||| ||| ||| | ||| || | || || || || || Sbjct 453041 ATCCCCTCTTTGTCTTGGAT-TTTAGCTTTCACATTTTCGATAGTATCAGATGGTTCGAC 452983 Query 34659 TTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706 || | || || ||||| || || | |||||||| ||||| ||||| Sbjct 452982 CTCTAGCGTGATAGTTTTCCCCGTGAGGGTTTTCACGAAAATTTGCAT 452935 >seq38 Length=2283748 Score = 105 bits (116), Expect = 4e-18 Identities = 157/220 (71%), Gaps = 2/220 (1%) Strand=Plus/Minus Query 34489 AGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGC 34548 || || | ||| | |||||| || |||||| ||||||||||| || ||||| || || Sbjct 1209637 AGTCGAAGCACTAGATGGAGCGTCGACTCCTTCTGAATGTTATAGTCGGAAAGGGTACGA 1209578 Query 34549 TCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCC 34608 ||||||| || || || |||||||| || || | ||| || || || || | |||||| Sbjct 1209577 CCGTCTTCCAGCTGCTTGCCGGCAAAGATCAACCTCTGCTGATCTGGGGGAATCCCCTCC 1209518 Query 34609 TTGTCTGTGATCTTTTGTTTTAAC-GATAAAATTGTGTCTTCGCTCTCCACTTCCACGGT 34667 |||||| ||| ||| | ||| || | || ||||| || ||||||| || Sbjct 1209517 TTGTCTTGGAT-TTTCGCTTTCACATTTTCGATGGTGTCAGATGGTTCGACTTCCAAAGT 1209459 Query 34668 TATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCATG 34707 || || || ||||| | |||||||| || ||||||||| Sbjct 1209458 GATGGTCTTGCCGGTCAGGGTTTTCACGAAGATCTGCATG 1209419 Score = 86.0 bits (94), Expect = 4e-12 Identities = 152/219 (69%), Gaps = 2/219 (1%) Strand=Plus/Minus Query 34489 AGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGC 34548 ||||| | ||||| || || ||| || ||||| || || || || ||||| || || Sbjct 1209181 AGACGTAGAACCAAGTGAAGGGTGGATTCTTTTTGGATATTGTAGTCAGAAAGGGTGCGT 1209122 Query 34549 TCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCC 34608 | ||||| || || || |||||||| || | ||| || ||||| || || | |||||| Sbjct 1209121 CCATCTTCTAGCTGCTTGCCGGCAAAAATAAGACGTTGCTGGTCTGGGGGAATCCCCTCC 1209062 Query 34609 TTGTCTGTGATCTTTTGTTTTAACGAT-AAAATTGTGTCTTCGCTCTCCACTTCCACGGT 34667 |||||| ||| ||| | || ||| | ||| || || || ||||||| || Sbjct 1209061 TTGTCTTGGAT-TTTGGCCTTGACGTTCTCAATGGTATCGGATGGTTCGACTTCCAGAGT 1209003 Query 34668 TATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706 || || || || || || ||||| || || |||||||| Sbjct 1209002 GATGGTCTTTCCCGTCAAGGTTTTTACGAAGATCTGCAT 1208964 >seq365 Length=450407 Score = 95.1 bits (104), Expect = 8e-15 Identities = 165/235 (70%), Gaps = 4/235 (2%) Strand=Plus/Minus Query 34478 CGCCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTG 34537 |||| || | || | |||||| | ||| || || ||||| ||||||||||| || | Sbjct 426503 CGCCACCACGGAGTCTCAACACGAGATGAAGCGTTGATTCCTTCTGAATGTTATAGTCGG 426444 Query 34538 AAAGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCG 34597 | | || || | ||||| | ||||| || || || |||| ||| || || || || | Sbjct 426443 ATAAGGTACGTCCATCTTCTAACTGTTTCCCAGCGAAAATTAGACGTTGCTGATCAGGGG 426384 Query 34598 GCACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGAT-AAAATTGTGTCT-TCGCTCTC 34655 | | || || |||||| |||| |||| ||| || | || || ||| || | || Sbjct 426383 GGATACCTTCTTTGTCTTGGATC-TTTGCTTTGACATTCTCGATGGTATCTGACGGT-TC 426326 Query 34656 CACTTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCATGTTG 34710 || || | ||| || || ||||| || || ||||| |||||||||||||||||| Sbjct 426325 AACCTCAAGGGTGATGGTCTTACCTGTCAAAGTTTTTACAAAAATCTGCATGTTG 426271 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 314689424176442