Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anoplophora_20glabripennis_20[refseq_20GCF_5F000390285.1_202013-05- 14] 10,474 sequences; 707,727,967 total letters Query= NC_028636.1 Length=135952 Score E Sequences producing significant alignments: (Bits) Value seq365 152 4e-32 seq747 149 5e-31 seq38 149 5e-31 >seq365 Length=450407 Score = 152 bits (168), Expect = 4e-32 Identities = 178/239 (74%), Gaps = 1/239 (0%) Strand=Plus/Plus Query 26987 CATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTC 27046 ||||||||| |||||||||||| |||| || ||| | || || ||||| || |||||||| Sbjct 426274 CATGCAGATTTTTGTAAAAACTTTGACAGGTAAGACCATCACCCTTGAGGTTGAACCGTC 426333 Query 27047 CGACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCA 27106 || | || |||| |||||| ||| || |||||||||||||| || || || ||||| Sbjct 426334 AGATACCATCGAGAATGTCAAAGCAAAGATCCAAGACAAAGAAGGTATCCCCCCTGATCA 426393 Query 27107 ACAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAA 27166 || ||| |||| | ||| || ||||| || ||||| | ||| | ||||| || || Sbjct 426394 GCAACGTCTAATTTTCGCTGGGAAACAGTTAGAAGATGGACGTACCTTATCCGACTATAA 426453 Query 27167 CATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGC-ATAACAAAC 27224 |||||| ||||| || || | ||| | || ||| | | || |||||| ||| |||| Sbjct 426454 CATTCAGAAGGAATCAACGCTTCATCTCGTGTTGAGACTCCGTGGTGGCGCTAAGAAAC 426512 >seq747 Length=644639 Score = 149 bits (164), Expect = 5e-31 Identities = 178/241 (74%), Gaps = 3/241 (1%) Strand=Plus/Minus Query 26981 ATACGCCAT---GCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGT 27037 ||||||||| ||| || || |||||||| || || || || |||| || || || || Sbjct 462728 ATACGCCATTATGCAAATTTTCGTAAAAACCCTCACGGGTAAAACTATCACGCTAGAGGT 462669 Query 27038 GGAACCGTCCGACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACC 27097 || || || ||| | || || | || ||| ||||| || |||||||| ||||| || Sbjct 462668 CGAGCCTTCTGACACAATAGAAAACGTTAAAGCTAAAATCCAGGACAAAGAGGGCATTCC 462609 Query 27098 ACCCGATCAACAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTC 27157 || |||||||||||||| || | ||| ||||||||| | ||||| | || |||| Sbjct 462608 TCCTGATCAACAGCGTTTGATCTTCGCAGGCAAACAACTTGAAGATGGACGTACTCTTTC 462549 Query 27158 CGATTACAACATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 || ||||| || |||||||| || ||| | || |||||||| || ||| |||| ||||| Sbjct 462548 TGACTACAATATCCAAAAGGAATCAACCCTTCACTTGGTTTTACGGTTGAGGGGCGGCAT 462489 Query 27218 A 27218 | Sbjct 462488 A 462488 Score = 136 bits (150), Expect = 3e-27 Identities = 167/228 (73%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 ||||| || || |||||||| || || || ||| | || || || || || || || || Sbjct 466194 ATGCAAATTTTCGTAAAAACCCTAACGGGTAAGACCATCACGCTAGAGGTCGAGCCTTCT 466135 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| | || || | || ||| ||||| || ||||||||||| || || ||||||||| Sbjct 466134 GACCCAATAGAAAACGTTAAAGCTAAAATCCAGGACAAAGAAGGTATTCCTCCCGATCAA 466075 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 |||||||| || | ||| || |||||| | ||||| | || ||| || ||||| Sbjct 466074 CAGCGTTTGATCTTCGCGGGTAAACAACTAGAAGATGGGCGCACTCCTTCTGACTACAAT 466015 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGC 27215 || |||||||| || ||| | || |||||||| || ||| |||| ||| Sbjct 466014 ATCCAAAAGGAATCAACCCTTCACTTGGTTTTACGGTTGAGGGGCGGC 465967 Score = 122 bits (134), Expect = 8e-23 Identities = 165/230 (72%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 ||||| || || || ||||| || || || || |||| || || || || ||||| || Sbjct 452935 ATGCAAATTTTCGTGAAAACCCTCACGGGGAAAACTATCACGCTAGAGGTCGAACCATCT 452994 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 || | || || | || ||| ||||| ||||||||||| || || || || ||||| Sbjct 452995 GATACTATCGAAAATGTGAAAGCTAAAATCCAAGACAAAGAGGGGATTCCTCCAGATCAG 453054 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 || ||| | || | ||| || |||||| | ||||| | || | || || |||||| Sbjct 453055 CAACGTCTGATCTTCGCTGGTAAACAACTTGAAGATGGACGTACATTGTCTGACTACAAC 453114 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 || || |||||||| ||| | || ||||| ||||||||| | ||||| || Sbjct 453115 ATCCAGAAGGAGTCTACCCTTCACTTGGTATTGCGTTTGAGAGGTGGTAT 453164 >seq38 Length=2283748 Score = 149 bits (164), Expect = 5e-31 Identities = 171/230 (74%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 |||||||| || || || || ||||| || || |||| || || || ||||| |||||| Sbjct 1208280 ATGCAGATCTTCGTGAAGACACTGACTGGTAAAACTATCACCCTCGAGGTGGAGCCGTCC 1208339 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| | || |||| || || || || || |||||||| ||||| || |||||||| Sbjct 1208340 GACACCATCGAGAACGTGAAGGCCAAGATCCAGGACAAAGAGGGCATCCCTCCCGATCAG 1208399 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 ||| | || || | |||||||||||| ||||| ||| | ||| | || || |||||| Sbjct 1208400 CAGAGGTTGATCTTCGCCGGCAAACAGTTGGAGGACGGGCGTACCTTGTCGGACTACAAC 1208459 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 || || ||||| || ||||| || ||||| | ||| | || |||||||| Sbjct 1208460 ATCCAGAAGGAATCCACCTTGCACTTGGTACTCCGTCTCCGTGGTGGCAT 1208509 Score = 145 bits (160), Expect = 7e-30 Identities = 151/198 (76%), Gaps = 0/198 (0%) Strand=Plus/Plus Query 26987 CATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTC 27046 ||||||||| || || ||||| |||||||||||| | || ||| | ||||| ||||| || Sbjct 1209419 CATGCAGATCTTCGTGAAAACCCTGACCGGCAAGACCATCACTTTGGAAGTCGAACCATC 1209478 Query 27047 CGACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCA 27106 ||| | || || | || ||| ||||| |||||||| || || || || || ||||| Sbjct 1209479 TGACACCATCGAAAATGTGAAAGCGAAAATCCAAGACAAGGAGGGGATTCCCCCAGATCA 1209538 Query 27107 ACAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAA 27166 ||| | || || | |||||||| || |||||||| || ||| ||||||| || || Sbjct 1209539 GCAGAGGTTGATCTTTGCCGGCAAGCAGCTGGAAGACGGTCGTACCCTTTCCGACTATAA 1209598 Query 27167 CATTCAAAAGGAGTCGAC 27184 |||||| ||||||||||| Sbjct 1209599 CATTCAGAAGGAGTCGAC 1209616 Score = 140 bits (154), Expect = 3e-28 Identities = 169/230 (73%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 ||||| || ||||| ||||| |||| || ||| | || || | || || ||||||||| Sbjct 1209192 ATGCAAATCTTTGTCAAAACCTTGACGGGAAAGACCATCACCTTGGAGGTTGAACCGTCC 1209251 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 || | ||||||| || || ||||| |||||||||||||| || || || ||||| Sbjct 1209252 GATACCATTGAGAACGTGAAGGCCAAAATCCAAGACAAAGAAGGGATTCCCCCAGATCAG 1209311 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 || ||| | || | |||||||| || | ||||| | ||| ||||||| ||||| Sbjct 1209312 CAACGTCTTATTTTTGCCGGCAAGCAGCTAGAAGATGGACGCACCCTTTCCGACTACAAT 1209371 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 || ||||| || || ||| | || |||||| ||||| | || |||||||| Sbjct 1209372 ATCCAAAAAGAATCCACCCTTCACTTGGTTCTGCGTCTCCGTGGTGGCAT 1209421 Score = 131 bits (144), Expect = 1e-25 Identities = 167/230 (73%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 |||||||| ||||||||||| |||| |||||| | || || | || || ||||||||| Sbjct 1208736 ATGCAGATCTTTGTAAAAACCTTGACGGGCAAGACCATCACCTTGGAGGTCGAACCGTCC 1208795 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 || | ||||| | || || |||||||||||||||||||| || || || || || Sbjct 1208796 GATACTATTGAAAACGTGAAGGCCAAAATTCAAGACAAAGAAGGGATTCCCCCAGACCAG 1208855 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 || || | || | ||||||||||| | ||||| || || | ||||| || || Sbjct 1208856 CAACGACTTATTTTTGCCGGCAAACAGCTAGAAGATGGTCGCACTCTCTCCGACTATAAT 1208915 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 ||||| || || |||||| | || ||||| | ||| | || ||||| || Sbjct 1208916 ATTCAGAAAGAATCGACCCTTCACTTGGTGCTCCGTCTTCGTGGTGGTAT 1208965 Score = 129 bits (142), Expect = 5e-25 Identities = 167/231 (72%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 26987 CATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTC 27046 ||||||||| || || ||||| |||| || || | || ||| | ||||| ||||| || Sbjct 1208507 CATGCAGATCTTCGTGAAAACCTTGACGGGGAAAACCATCACTTTGGAAGTCGAACCATC 1208566 Query 27047 CGACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCA 27106 ||| | || |||| ||||| ||||| |||||||||||||| || || || ||||| Sbjct 1208567 TGACACCATCGAGAATGTCAAGGCCAAAATCCAAGACAAAGAAGGGATTCCTCCGGATCA 1208626 Query 27107 ACAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAA 27166 || ||| | || | ||||||||| || | ||||| | || ||||||| || || Sbjct 1208627 GCAACGTCTTATTTTCGCCGGCAAGCAGCTAGAAGATGGACGCACACTTTCCGACTATAA 1208686 Query 27167 CATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 || || ||||| || || | || |||||| ||||| | || ||||| || Sbjct 1208687 TATCCAGAAGGAATCTACTCTTCACTTGGTTCTGCGTCTACGTGGTGGTAT 1208737 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 434861458308480