Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anoplophora_20glabripennis_20[refseq_20GCF_5F000390285.1_202013-05- 14] 10,474 sequences; 707,727,967 total letters Query= NC_029692.1 Length=362276 Score E Sequences producing significant alignments: (Bits) Value seq38 170 4e-37 seq747 156 1e-32 seq233 100 7e-16 >seq38 Length=2283748 Score = 170 bits (188), Expect = 4e-37 Identities = 171/222 (77%), Gaps = 0/222 (0%) Strand=Plus/Minus Query 210893 ACGAAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGT 210952 ||| || | ||| || | |||||| ||||| ||||||||||| || || || | |||||| Sbjct 1209185 ACGGAGACGTAGAACCAAGTGAAGGGTGGATTCTTTTTGGATATTGTAGTCAGAAAGGGT 1209126 Query 210953 CCTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCC 211012 | ||||||||| ||||||||||| || || ||||| ||||| ||||| || |||| || Sbjct 1209125 GCGTCCATCTTCTAGCTGCTTGCCGGCAAAAATAAGACGTTGCTGGTCTGGGGGAATCCC 1209066 Query 211013 TTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAG 211072 |||||||| ||||| || || ||||| || ||||| || || ||| || || || Sbjct 1209065 CTCCTTGTCTTGGATTTTGGCCTTGACGTTCTCAATGGTATCGGATGGTTCGACTTCCAG 1209006 Query 211073 AGTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 |||||| ||||||||||| | || ||||| || | |||||| Sbjct 1209005 AGTGATGGTCTTTCCCGTCAAGGTTTTTACGAAGATCTGCAT 1208964 Score = 163 bits (180), Expect = 7e-35 Identities = 164/213 (77%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 || || | |||||| ||||| ||||||||||| || || || | |||||| | ||||||| Sbjct 1209403 AGAACCAAGTGAAGGGTGGATTCTTTTTGGATATTGTAGTCGGAAAGGGTGCGTCCATCT 1209344 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022 || ||||||||||| || || ||||| ||||| || || || |||| ||||| ||||| Sbjct 1209343 TCTAGCTGCTTGCCGGCAAAAATAAGACGTTGCTGATCTGGGGGAATCCCTTCTTTGTCT 1209284 Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082 ||||| || |||||||| || ||||| || || ||||||||| | ||||| ||| Sbjct 1209283 TGGATTTTGGCCTTCACGTTCTCAATGGTATCGGACGGTTCAACCTCCAAGGTGATGGTC 1209224 Query 211083 TTTCCCGTGAGAGTCTTTACAAACACCTGCATT 211115 |||||||| | || || ||||| | |||||| Sbjct 1209223 TTTCCCGTCAAGGTTTTGACAAAGATTTGCATT 1209191 Score = 152 bits (168), Expect = 1e-31 Identities = 161/212 (76%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 || || | ||||||||| || || || ||||| ||||| || | ||| || | ||||||| Sbjct 1208719 AGAACCAAGTGAAGAGTAGATTCCTTCTGGATATTATAGTCGGAAAGTGTGCGTCCATCT 1208660 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022 || ||||||||||| ||||| ||||| ||||| || || ||||||| ||||| ||||| Sbjct 1208659 TCTAGCTGCTTGCCGGCGAAAATAAGACGTTGCTGATCCGGAGGAATCCCTTCTTTGTCT 1208600 Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082 ||||| || || || || |||||||||||||| ||| || || | |||||| || Sbjct 1208599 TGGATTTTGGCCTTGACATTCTCGATGGTGTCAGATGGTTCGACTTCCAAAGTGATGGTT 1208540 Query 211083 TTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 || ||||| | || || || || | |||||| Sbjct 1208539 TTCCCCGTCAAGGTTTTCACGAAGATCTGCAT 1208508 Score = 149 bits (164), Expect = 1e-30 Identities = 168/225 (75%), Gaps = 0/225 (0%) Strand=Plus/Minus Query 210890 TCAACGAAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAG 210949 || ||| |||| || || || || || || ||||| || || |||||||| || | ||| Sbjct 1209644 TCCACGGAGTCGAAGCACTAGATGGAGCGTCGACTCCTTCTGAATGTTATAGTCGGAAAG 1209585 Query 210950 GGTCCTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAAC 211009 ||| | || ||||||||||||||||| || ||||| | | || || || || |||| Sbjct 1209584 GGTACGACCGTCTTCCAGCTGCTTGCCGGCAAAGATCAACCTCTGCTGATCTGGGGGAAT 1209525 Query 211010 TCCTTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTC 211069 || |||||||| ||||| || |||||| ||||||||||||||||| ||| || || Sbjct 1209524 CCCCTCCTTGTCTTGGATTTTCGCTTTCACATTTTCGATGGTGTCAGATGGTTCGACTTC 1209465 Query 211070 GAGAGTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 | |||||| ||||| || || || || || || || | |||||| Sbjct 1209464 CAAAGTGATGGTCTTGCCGGTCAGGGTTTTCACGAAGATCTGCAT 1209420 Score = 140 bits (154), Expect = 8e-28 Identities = 164/222 (74%), Gaps = 0/222 (0%) Strand=Plus/Minus Query 210893 ACGAAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGT 210952 |||||| | || || | |||||| || || ||||| || || ||||| || | || || Sbjct 1208957 ACGAAGACGGAGCACCAAGTGAAGGGTCGATTCTTTCTGAATATTATAGTCGGAGAGAGT 1208898 Query 210953 CCTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCC 211012 | |||||||| ||||| ||||| || || ||||| ||||| ||||| || |||| || Sbjct 1208897 GCGACCATCTTCTAGCTGTTTGCCGGCAAAAATAAGTCGTTGCTGGTCTGGGGGAATCCC 1208838 Query 211013 TTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAG 211072 ||| ||||| || || || ||||||||||| || || || || ||| ||||| | Sbjct 1208837 TTCTTTGTCTTGAATTTTGGCCTTCACGTTTTCAATAGTATCGGACGGTTCGACCTCCAA 1208778 Query 211073 AGTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 ||||| ||||| ||||| | || |||||||| | |||||| Sbjct 1208777 GGTGATGGTCTTGCCCGTCAAGGTTTTTACAAAGATCTGCAT 1208736 Score = 127 bits (140), Expect = 5e-24 Identities = 147/198 (74%), Gaps = 0/198 (0%) Strand=Plus/Minus Query 210918 GTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCCAGCTGCTTGCCT 210977 ||||| || || |||||||| || |||| | ||| | || || |||| ||| ||||| Sbjct 1208476 GTGGATTCCTTCTGGATGTTGTAGTCCGACAAGGTACGCCCGTCCTCCAACTGTTTGCCG 1208417 Query 210978 GCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTTTTGTTTC 211037 |||||||| | | || || || ||||| | || || |||||||||||||| ||| Sbjct 1208416 GCGAAGATCAACCTCTGCTGATCGGGAGGGATGCCCTCTTTGTCCTGGATCTTGGCCTTC 1208357 Query 211038 ACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTCCCGTGAGAGTC 211097 ||||| ||||||||||| || || |||||||| ||||| || || || || || ||| Sbjct 1208356 ACGTTCTCGATGGTGTCGGACGGCTCCACCTCGAGGGTGATAGTTTTACCAGTCAGTGTC 1208297 Query 211098 TTTACAAACACCTGCATT 211115 || || || | ||||||| Sbjct 1208296 TTCACGAAGATCTGCATT 1208279 >seq747 Length=644639 Score = 156 bits (172), Expect = 1e-32 Identities = 157/204 (77%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 210911 GTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCCAGCTG 210970 |||||| || || || |||||||| || || || | ||| || | ||||||||| || || Sbjct 462515 GTGAAGGGTTGATTCCTTTTGGATATTGTAGTCAGAAAGAGTACGTCCATCTTCAAGTTG 462574 Query 210971 CTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTT 211030 |||||||||||||| | || ||||| |||||||||| || || ||||||||||| || Sbjct 462575 TTTGCCTGCGAAGATCAAACGCTGTTGATCAGGAGGAATGCCCTCTTTGTCCTGGATTTT 462634 Query 211031 TTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTCCCGT 211090 ||| |||||||| || |||||||| || ||||| || ||||| || || ||||| Sbjct 462635 AGCTTTAACGTTTTCTATTGTGTCAGAAGGCTCGACCTCTAGCGTGATAGTTTTACCCGT 462694 Query 211091 GAGAGTCTTTACAAACACCTGCAT 211114 ||| || ||||| || | ||||| Sbjct 462695 GAGGGTTTTTACGAAAATTTGCAT 462718 Score = 134 bits (148), Expect = 3e-26 Identities = 152/204 (75%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 210911 GTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCCAGCTG 210970 |||||| || || || |||||||| || || || | | | || | |||||||| || || Sbjct 465991 GTGAAGGGTTGATTCCTTTTGGATATTGTAGTCAGAAGGAGTGCGCCCATCTTCTAGTTG 466050 Query 210971 CTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTT 211030 || || |||||||| | || ||||| || ||||||| ||||| ||||||||||| || Sbjct 466051 TTTACCCGCGAAGATCAAACGCTGTTGATCGGGAGGAATACCTTCTTTGTCCTGGATTTT 466110 Query 211031 TTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTCCCGT 211090 ||| |||||||| || | |||||| || ||||| || ||||| ||||| ||||| Sbjct 466111 AGCTTTAACGTTTTCTATTGGGTCAGAAGGCTCGACCTCTAGCGTGATGGTCTTACCCGT 466170 Query 211091 GAGAGTCTTTACAAACACCTGCAT 211114 || || ||||| || | ||||| Sbjct 466171 TAGGGTTTTTACGAAAATTTGCAT 466194 >seq233 Length=1369072 Score = 100 bits (110), Expect = 7e-16 Identities = 145/204 (71%), Gaps = 2/204 (1%) Strand=Plus/Plus Query 210912 TGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCCAGCTGC 210971 |||||||| || || || ||||||| || || | | || | | |||||| || || Sbjct 301380 TGAAGAGTAGAGTCATTCTGGATGTAGTAGTCAGACAATGTGCGTTCATCTTTAAGTTGT 301439 Query 210972 TTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTTT 211031 || || || || || ||| |||| || || ||||||| || ||| |||||| || Sbjct 301440 TTACCAGCAAAAATCAGGTGTTGCTGATCTGGAGGAAT--CTCCCTATAGCTGGATTTTA 301497 Query 211032 TGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTCCCGTG 211091 |||||| |||||||| || ||||| ||| || || | ||||| |||||||||||| Sbjct 301498 GCTTTCACATTTTCGATAGTATCAGATGATTCGACTTCTACCGTGATAGTCTTTCCCGTG 301557 Query 211092 AGAGTCTTTACAAACACCTGCATT 211115 || || ||||| | | |||||| Sbjct 301558 AGGGTTTTTACGATAATTTGCATT 301581 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1158996443975010