Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anoplophora_20glabripennis_20[refseq_20GCF_5F000390285.1_202013-05- 14] 10,474 sequences; 707,727,967 total letters Query= NC_029996.1 Length=134272 Score E Sequences producing significant alignments: (Bits) Value seq38 120 3e-22 >seq38 Length=2283748 Score = 120 bits (132), Expect = 3e-22 Identities = 152/209 (73%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 39076 ACCAAATGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATCA 39135 ||||| || || ||| |||||||| ||||| || |||| ||| || ||| | || || Sbjct 1209400 ACCAAGTGAAGGGTGGATTCTTTTTGGATATTGTAGTCGGAAAGGGTGCGTCCATCTTCT 1209341 Query 39136 AGCTGTTTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCATG 39195 ||||| ||||| ||||| |||||||| ||||| || | ||| | | |||||||| | Sbjct 1209340 AGCTGCTTGCCGGCAAAAATAAGACGTTGCTGATCTGGGGGAATCCCTTCTTTGTCTTGG 1209281 Query 39196 ATTTTCTGTTTGAGCGTCGCCACCGTATCGCTCGACTCCACGTCCACCGTGATACTTTTT 39255 ||||| || | || | | |||||| || || || |||| ||||| | ||| Sbjct 1209280 ATTTTGGCCTTCACGTTCTCAATGGTATCGGACGGTTCAACCTCCAAGGTGATGGTCTTT 1209221 Query 39256 CCCGTCAGCGTTTTAACAAAGATTTGCAT 39284 ||||||| ||||| |||||||||||||| Sbjct 1209220 CCCGTCAAGGTTTTGACAAAGATTTGCAT 1209192 Score = 95.1 bits (104), Expect = 1e-14 Identities = 147/210 (70%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 39075 CACCAAATGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATC 39134 |||||| || || || ||||| || |||||||| |||| || || || | || || Sbjct 1208945 CACCAAGTGAAGGGTCGATTCTTTCTGAATATTATAGTCGGAGAGAGTGCGACCATCTTC 1208886 Query 39135 AAGCTGTTTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCAT 39194 ||||||||||| ||||| ||||| || |||||||| | ||| | | |||||||| Sbjct 1208885 TAGCTGTTTGCCGGCAAAAATAAGTCGTTGCTGGTCTGGGGGAATCCCTTCTTTGTCTTG 1208826 Query 39195 GATTTTCTGTTTGAGCGTCGCCACCGTATCGCTCGACTCCACGTCCACCGTGATACTTTT 39254 ||||| || | | | | |||||| || || || |||| ||||| | || Sbjct 1208825 AATTTTGGCCTTCACGTTTTCAATAGTATCGGACGGTTCGACCTCCAAGGTGATGGTCTT 1208766 Query 39255 TCCCGTCAGCGTTTTAACAAAGATTTGCAT 39284 ||||||| ||||| |||||||| ||||| Sbjct 1208765 GCCCGTCAAGGTTTTTACAAAGATCTGCAT 1208736 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 429490767698762