Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anoplophora_20glabripennis_20[refseq_20GCF_5F000390285.1_202013-05- 14] 10,474 sequences; 707,727,967 total letters Query= NC_029997.1 Length=105667 Score E Sequences producing significant alignments: (Bits) Value seq747 134 9e-27 seq38 107 1e-18 seq233 93.3 3e-14 seq365 91.5 1e-13 >seq747 Length=644639 Score = 134 bits (148), Expect = 9e-27 Identities = 166/227 (73%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 ||||| |||||||| |||||||||||||| ||||| ||||| || || || || | | Sbjct 462718 ATGCAAATTTTCGTAAAAACCCTCACGGGTAAAACTATCACGCTAGAGGTCGAGCCTTCT 462659 Query 23671 GACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAA 23730 ||||| | |||| | ||| ||||| |||||||| || | || || |||||| Sbjct 462658 GACACAATAGAAAACGTTAAAGCTAAAATCCAGGACAAAGAGGGCATTCCTCCTGATCAA 462599 Query 23731 CAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAAC 23790 |||||||| || || || ||||||||||| ||||| | ||| ||| | || ||||| Sbjct 462598 CAGCGTTTGATCTTCGCAGGCAAACAACTTGAAGATGGACGTACTCTTTCTGACTACAAT 462539 Query 23791 ATACAAAAAGAGTCCACATTACATTTAGTTTTAAGGTTGCGAGGAGG 23837 || ||||| || || || | || || |||||| ||||| | || || Sbjct 462538 ATCCAAAAGGAATCAACCCTTCACTTGGTTTTACGGTTGAGGGGCGG 462492 Score = 122 bits (134), Expect = 6e-23 Identities = 163/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 ||||| |||||||| |||||||| ||||| || || ||||| || || || || | | Sbjct 466194 ATGCAAATTTTCGTAAAAACCCTAACGGGTAAGACCATCACGCTAGAGGTCGAGCCTTCT 466135 Query 23671 GACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAA 23730 ||| | | |||| | ||| ||||| |||||||||||| | || || |||||| Sbjct 466134 GACCCAATAGAAAACGTTAAAGCTAAAATCCAGGACAAAGAAGGTATTCCTCCCGATCAA 466075 Query 23731 CAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAAC 23790 |||||||| || || || || |||||||| ||||| | |||||| || ||||| Sbjct 466074 CAGCGTTTGATCTTCGCGGGTAAACAACTAGAAGATGGGCGCACTCCTTCTGACTACAAT 466015 Query 23791 ATACAAAAAGAGTCCACATTACATTTAGTTTTAAGGTTGCGAGGAGG 23837 || ||||| || || || | || || |||||| ||||| | || || Sbjct 466014 ATCCAAAAGGAATCAACCCTTCACTTGGTTTTACGGTTGAGGGGCGG 465968 Score = 118 bits (130), Expect = 7e-22 Identities = 163/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 23610 AATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCAC 23669 |||||| |||||||| |||||||||||||| ||||| ||||| || || || || | | Sbjct 452934 AATGCAAATTTTCGTGAAAACCCTCACGGGGAAAACTATCACGCTAGAGGTCGAACCATC 452993 Query 23670 GGACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729 || ||| | |||| | ||| ||||| |||||||| || | || |||||||| Sbjct 452994 TGATACTATCGAAAATGTGAAAGCTAAAATCCAAGACAAAGAGGGGATTCCTCCAGATCA 453053 Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789 || ||| | || || || || |||||||| ||||| | ||| || || || ||||| Sbjct 453054 GCAACGTCTGATCTTCGCTGGTAAACAACTTGAAGATGGACGTACATTGTCTGACTACAA 453113 Query 23790 CATACAAAAAGAGTCCACATTACATTTAGTTTTAAGGTTGCGAGGAGG 23837 ||| || || ||||| || | || || || || | ||| |||| || Sbjct 453114 CATCCAGAAGGAGTCTACCCTTCACTTGGTATTGCGTTTGAGAGGTGG 453161 >seq38 Length=2283748 Score = 107 bits (118), Expect = 1e-18 Identities = 149/209 (71%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 |||||||| ||||| |||||||| || || || || |||||| | ||||| || | | Sbjct 1209420 ATGCAGATCTTCGTGAAAACCCTGACCGGCAAGACCATCACTTTGGAAGTCGAACCATCT 1209479 Query 23671 GACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAA 23730 ||||| | |||| | ||| ||||| ||||| || || | || |||||||| Sbjct 1209480 GACACCATCGAAAATGTGAAAGCGAAAATCCAAGACAAGGAGGGGATTCCCCCAGATCAG 1209539 Query 23731 CAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAAC 23790 ||| | || || ||||||||||| || |||||||||| || || | ||| || ||| Sbjct 1209540 CAGAGGTTGATCTTTGCCGGCAAGCAGCTGGAAGACGGTCGTACCCTTTCCGACTATAAC 1209599 Query 23791 ATACAAAAAGAGTCCACATTACATTTAGT 23819 || || || ||||| || | ||| |||| Sbjct 1209600 ATTCAGAAGGAGTCGACGCTCCATCTAGT 1209628 Score = 105 bits (116), Expect = 5e-18 Identities = 151/213 (71%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 |||||||| ||||| |||||| | |||||||| || |||||||| ||||| || | | Sbjct 1208964 ATGCAGATCTTCGTAAAAACCTTGACGGGAAAGACCATCACTCTGGAAGTCGAACCATCC 1209023 Query 23671 GACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAA 23730 || || |||| | | || ||||| ||||| || || | || ||||| || Sbjct 1209024 GATACCATTGAGAACGTCAAGGCCAAAATCCAAGACAAGGAGGGGATTCCCCCAGACCAG 1209083 Query 23731 CAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAAC 23790 || ||| | || ||||||||||| || || ||||| | |||||| | || ||||| Sbjct 1209084 CAACGTCTTATTTTTGCCGGCAAGCAGCTAGAAGATGGACGCACCCTTTCTGACTACAAT 1209143 Query 23791 ATACAAAAAGAGTCCACATTACATTTAGTTTTA 23823 || |||||||| ||||| | || || ||| || Sbjct 1209144 ATCCAAAAAGAATCCACCCTTCACTTGGTTCTA 1209176 Score = 105 bits (116), Expect = 5e-18 Identities = 150/211 (71%), Gaps = 0/211 (0%) Strand=Plus/Plus Query 23610 AATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCAC 23669 |||||| || || || |||||| | |||||||| || ||||| | || ||||| | | Sbjct 1209191 AATGCAAATCTTTGTCAAAACCTTGACGGGAAAGACCATCACCTTGGAGGTTGAACCGTC 1209250 Query 23670 GGACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729 || || |||| | | || ||||| ||||||||||| | || |||||||| Sbjct 1209251 CGATACCATTGAGAACGTGAAGGCCAAAATCCAAGACAAAGAAGGGATTCCCCCAGATCA 1209310 Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789 || ||| | || ||||||||||| || || ||||| | |||||| | ||| ||||| Sbjct 1209311 GCAACGTCTTATTTTTGCCGGCAAGCAGCTAGAAGATGGACGCACCCTTTCCGACTACAA 1209370 Query 23790 CATACAAAAAGAGTCCACATTACATTTAGTT 23820 || |||||||| ||||| | || || ||| Sbjct 1209371 TATCCAAAAAGAATCCACCCTTCACTTGGTT 1209401 Score = 95.1 bits (104), Expect = 8e-15 Identities = 149/211 (71%), Gaps = 2/211 (1%) Strand=Plus/Plus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 |||||||| ||||| |||||| | ||||| ||||| |||||| | ||||| || | | Sbjct 1208508 ATGCAGATCTTCGTGAAAACCTTGACGGGGAAAACCATCACTTTGGAAGTCGAACCATCT 1208567 Query 23671 GACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729 ||||| | || ||| | || | |||| | ||||||||||| | || || ||||| Sbjct 1208568 GACACCATCGAGAATGTCAAGGCCAAAA-TCCAAGACAAAGAAGGGATTCCTCCGGATCA 1208626 Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789 || ||| | || || |||||||| || || ||||| | |||||| | ||| || || Sbjct 1208627 GCAACGTCTTATTTTCGCCGGCAAGCAGCTAGAAGATGGACGCACACTTTCCGACTATAA 1208686 Query 23790 CATACAAAAAGAGTCCACATTACATTTAGTT 23820 || || || || || || | || || ||| Sbjct 1208687 TATCCAGAAGGAATCTACTCTTCACTTGGTT 1208717 Score = 95.1 bits (104), Expect = 8e-15 Identities = 139/197 (71%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 |||||||| || || |||||| | ||||| || || ||||| | || || || | | Sbjct 1208736 ATGCAGATCTTTGTAAAAACCTTGACGGGCAAGACCATCACCTTGGAGGTCGAACCGTCC 1208795 Query 23671 GACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAA 23730 || ||| |||||| | || |||||| ||||||||||| | || ||||| || Sbjct 1208796 GATACTATTGAAAACGTGAAGGCCAAAATTCAAGACAAAGAAGGGATTCCCCCAGACCAG 1208855 Query 23731 CAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAAC 23790 || || | || |||||||||||||| || ||||| | |||||| | ||| || || Sbjct 1208856 CAACGACTTATTTTTGCCGGCAAACAGCTAGAAGATGGTCGCACTCTCTCCGACTATAAT 1208915 Query 23791 ATACAAAAAGAGTCCAC 23807 || || ||||| || || Sbjct 1208916 ATTCAGAAAGAATCGAC 1208932 Score = 86.0 bits (94), Expect = 4e-12 Identities = 145/210 (69%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 23610 AATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCAC 23669 ||||||||| ||||| || || || || || ||||| ||||| ||||| || || | | Sbjct 1208279 AATGCAGATCTTCGTGAAGACACTGACTGGTAAAACTATCACCCTCGAGGTGGAGCCGTC 1208338 Query 23670 GGACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729 ||||| | || | | || || || |||||||| || | || || ||||| Sbjct 1208339 CGACACCATCGAGAACGTGAAGGCCAAGATCCAGGACAAAGAGGGCATCCCTCCCGATCA 1208398 Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789 ||| | || || || ||||||||||| |||| |||| || || || || ||||| Sbjct 1208399 GCAGAGGTTGATCTTCGCCGGCAAACAGTTGGAGGACGGGCGTACCTTGTCGGACTACAA 1208458 Query 23790 CATACAAAAAGAGTCCACATTACATTTAGT 23819 ||| || || || ||||| || || || || Sbjct 1208459 CATCCAGAAGGAATCCACCTTGCACTTGGT 1208488 >seq233 Length=1369072 Score = 93.3 bits (102), Expect = 3e-14 Identities = 165/235 (70%), Gaps = 7/235 (3%) Strand=Plus/Minus Query 23610 AATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCAC 23669 |||||| ||| |||| ||||||||||||||||| || ||||| | ||||| || || | Sbjct 301581 AATGCAAATTATCGTAAAAACCCTCACGGGAAAGACTATCACGGTAGAAGTCGAATCATC 301522 Query 23670 GGACACTGTTG-AAATATTAAAACAAAAAATTGCTGACAAAGAAGGTG-TACCGCCAGAT 23727 || ||| | | |||| | ||| | |||| | | | | || || | | || |||||| Sbjct 301521 TGATACTATCGAAAATGTGAAAGCTAAAA--TCCAGCTATAG--GGAGATTCCTCCAGAT 301466 Query 23728 CAACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTAC 23787 || || | | || ||||| || |||||||| |||| |||||||| || || ||| Sbjct 301465 CAGCAACACCTGATTTTTGCTGGTAAACAACTTAAAGATGAACGCACATTGTCTGACTAC 301406 Query 23788 AACATACAAAAAGAGTCCACATTACATTTAGTTTTAAGGTTGCGAGGAGG-ATCA 23841 |||| || || || || || | ||||| || || || ||||||| |||| Sbjct 301405 TACATCCAGAATGACTCTACTCTTCATTTGGTATTGCTTTTAAGAGGAGGTATCA 301351 >seq365 Length=450407 Score = 91.5 bits (100), Expect = 1e-13 Identities = 161/232 (69%), Gaps = 2/232 (1%) Strand=Plus/Plus Query 23595 CAATTAATTACTTAAAATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCT 23654 || |||| | | || ||||||||||| || ||||| | || || || || ||||| || Sbjct 426259 CAGTTAACTCCGCAACATGCAGATTTTTGTAAAAACTTTGACAGGTAAGACCATCACCCT 426318 Query 23655 CGAAGTTGACTCCACGGACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAG 23713 || ||||| | | || || | || ||| | ||| |||| | | |||||||||| Sbjct 426319 TGAGGTTGAACCGTCAGATACCATCGAGAATGTCAAAGCAAAGA-TCCAAGACAAAGAAG 426377 Query 23714 GTGTACCGCCAGATCAACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCA 23773 || | || || ||||| || ||| |||| || || || ||||| | ||||| | ||| | Sbjct 426378 GTATCCCCCCTGATCAGCAACGTCTAATTTTCGCTGGGAAACAGTTAGAAGATGGACGTA 426437 Query 23774 CTTTAGGCGATTACAACATACAAAAAGAGTCCACATTACATTTAGTTTTAAG 23825 | ||| ||| || ||||| || || || || || | ||| | || || || Sbjct 426438 CCTTATCCGACTATAACATTCAGAAGGAATCAACGCTTCATCTCGTGTTGAG 426489 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 337966452440792