Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anoplophora_20glabripennis_20[refseq_20GCF_5F000390285.1_202013-05- 14] 10,474 sequences; 707,727,967 total letters Query= NC_030240.1 Length=128058 Score E Sequences producing significant alignments: (Bits) Value seq38 86.0 5e-12 >seq38 Length=2283748 Score = 86.0 bits (94), Expect = 5e-12 Identities = 149/215 (69%), Gaps = 10/215 (5%) Strand=Plus/Minus Query 101029 CACCATGTGCAAAGTTGATTCTTTTTGAATATTGTAATCGGCCATAGTTTTGGAATCTTC 101088 ||||| ||| | || |||||||| |||||||| || |||| | ||| |||||| Sbjct 1208945 CACCAAGTGAAGGGTCGATTCTTTCTGAATATTATAGTCGGAGAGAGTGCGACCATCTTC 1208886 Query 101089 CAATTGTTTGCCCGCATATATAAGCCTTTGTTGGTCTACGGGCACGCCTTCTTTGTCGGC 101148 | |||||||| ||| | ||||| | ||| |||||| ||| | ||||||||||| Sbjct 1208885 TAGCTGTTTGCCGGCAAAAATAAGTCGTTGCTGGTCTGGGGGAATCCCTTCTTTGTCTTG 1208826 Query 101149 AATTTTTTGTTTCACATCGGCCACCGTCTCTGTGGACGTTGTT-----TCGACGGTAATA 101203 |||||| ||||| | | | || || ||||| ||| || | ||| || Sbjct 1208825 AATTTTGGCCTTCACGTTTTCAATAGTATC---GGACG--GTTCGACCTCCAAGGTGATG 1208771 Query 101204 GTTTTGCCCGTCAATGTTTTAATAAAAATTTGCAT 101238 || ||||||||||| ||||| | ||| || ||||| Sbjct 1208770 GTCTTGCCCGTCAAGGTTTTTACAAAGATCTGCAT 1208736 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 409608506030766