Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anoplophora_20glabripennis_20[refseq_20GCF_5F000390285.1_202013-05- 14] 10,474 sequences; 707,727,967 total letters Query= NC_030656.1 Length=133492 Score E Sequences producing significant alignments: (Bits) Value seq349 407 1e-108 >seq349 Length=550016 Score = 407 bits (450), Expect = 1e-108 Identities = 620/878 (71%), Gaps = 4/878 (0%) Strand=Plus/Minus Query 4256 TTTTTGGTATTCGGATACTCGCTTTTCGAAGAAATTAGTTTTGCCTTCTAACGAAATATT 4315 ||| ||||| ||| ||| ||| |||||||| ||||||||||| || |||||| | Sbjct 192960 TTTCTGGTACTCGCCGACTTTCTTCTCGAAGAAGTTAGTTTTGCCATCAGTGGAAATAAT 192901 Query 4316 TTCCATAAAATCAAACGGATTAGTTGCGTTGTAATGTTTTTCACACTTTAGAGCTACAAG 4375 ||| ||||| || |||||||| | ||| ||| |||||||| || | ||| Sbjct 192900 GGTCATGAAATCGAAAGGATTAGTGGAGTTATAAATCTTTTCACAACCGAGTTCAGTAAG 192841 Query 4376 CAATCGGTCAGCTACAAATTCTATATACTGGCTCATGAGTTCGCAGTTAATTCCAATTAA 4435 ||| | ||| || |||||||| |||||||||| |||||| | ||| || |||||||| | Sbjct 192840 CAACCTGTCGGCGACAAATTCGATATACTGGCACATGAGCTTGCAATTCATTCCAATGAG 192781 Query 4436 TCTCACAGGTAGCGCGTATGTCAAAAACTCTTGTTCTATAGTTACGGCTTCTGTGATTAT 4495 || || |||| || | | || ||| |||||||| |||| || || ||| ||||| Sbjct 192780 GCTTACGGGTAAGGCATCGGACAGAAATTCTTGTTCGATAGCAACAGCATCTCGAATTAT 192721 Query 4496 ATCTTTTATTTTATCTTTAGATGGTTTATTTACTAAGTATCCAAACAATAAACACGCAAA 4555 | || | | ||| ||||| ||||| | ||| | || |||| || || ||||| Sbjct 192720 ACCTACGACTCGATCCTTAGACGGTTTCTGTACGAGATACGAGAACAGTAGGCAAGCAAA 192661 Query 4556 ATCACAATGCAAACCTTCGTCTCTGCTAATCAGTTCGTTAGAAAACGTTAATCCGGGCAT 4615 || ||||| || ||||| ||||| |||| ||| ||||| || ||||| || ||||| Sbjct 192660 GTCGCAATGTAACCCTTCATCTCTAGAGATCAATTCATTAGAGAATGTTAAGCCAGGCAT 192601 Query 4616 TAAACCTCTCTTTTTAAGCCAAAATATAGCGGCAAATGACCCAGAAAAGAATATGCCTTC 4675 ||| |||| ||||| ||||| |||||||| || || ||||| || ||||| ||||| Sbjct 192600 TAAGCCTCGTTTTTTTAGCCAGAATATAGCCGCGAAGCTGCCAGAGAAAAATATACCTTC 192541 Query 4676 TACGGCGGCAAACGCTACTAATCGGGACCCGAACGAGCT-GGCTTTGTCTTTAATCCATT 4734 ||| || || || || | | | |||||| | || ||| | ||| ||||| | Sbjct 192540 TACCGCTGCGAAGGCGATGATCCTTTCCCCGAATGTACTACTCTTCGAGTTT-ATCCAGT 192482 Query 4735 TTAATGCCCAGTTAGCTTTTTTCTTAACGCACGGAATTGTGTATATAGCGTTAAATAATT 4794 |||| ||||| | ||| || || ||| || || | || | ||||| || || || Sbjct 192481 TTAAAGCCCAATCAGCCTTCTTACGAACACAAGGCAGGGTCTCAATAGCATTGAA-AAGG 192423 Query 4795 TACT-TTTTTCAAATGGGTCTTGAATATAAGTGTCTATTAGTAGGCTATACATTTCAGAA 4853 | | ||||| || || ||||||||| || || | | ||| |||||||| ||| Sbjct 192422 AAGTCTTTTTGTTTAGGATCGGTAATATAAGTTTCGATCAACATGCTGTACATTTCTGAA 192363 Query 4854 TGTATATTTTCTATAGCAATCTGAAATCCGTAAAAGCATCTAGCTTCTGTTACTTGAACT 4913 || ||||| || ||||| || || || || |||||||| | || |||||||| |||||| Sbjct 192362 TGGATATTCTCGATAGCTATTTGGAAACCATAAAAGCAACGTGCCTCTGTTACCTGAACT 192303 Query 4914 TCGTTACAAAATCTTTCTACTAAGTTTTCGTTTACTATACCGTCACTGGCTGCAAAAAAC 4973 || | | ||||||||||||| || || |||||||| || || || || |||||| Sbjct 192302 TCTTGGCTGAATCTTTCTACTAGATTCTCATTTACTATTCCATCGGAAGCAGCGAAAAAC 192243 Query 4974 GCCAAAACATGAGATATAAAGTACTGTTCGTCAGGCTTAAGTTTTTTCCAGTGGGGCAAA 5033 || | ||| || ||||| || | | ||||| | |||| || |||||| || | Sbjct 192242 GCGAGAACGTGTGATATGAAATGCCTTTCGTTATCAGAAAGTCTTACCCAGTGATCCATA 192183 Query 5034 TCTTTAGTTAAATCAACTTCTTCAACAGTCCAAAACGACGCTTCCGCTTTTTTGTACATA 5093 || |||| |||||| ||||| || |||||||| || ||||| |||| |||||| | Sbjct 192182 TCCTTAGATAAATCCACTTCCTCTGTGGTCCAAAATGAAGCTTCGGCTTCTTTGTATTTG 192123 Query 5094 GACCAAATATCAGGATACTGAATCGGAAGTATGACAAA 5131 | ||||||||| || ||||| || || | ||| ||||| Sbjct 192122 GCCCAAATATCGGGGTACTGGATGGGGAATATAACAAA 192085 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 426995086317842