Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anoplophora_20glabripennis_20[refseq_20GCF_5F000390285.1_202013-05- 14] 10,474 sequences; 707,727,967 total letters Query= NC_031033.1 Length=217124 Score E Sequences producing significant alignments: (Bits) Value seq1096 513 2e-140 seq349 354 1e-92 seq17 120 4e-22 >seq1096 Length=295351 Score = 513 bits (568), Expect = 2e-140 Identities = 1244/1871 (66%), Gaps = 27/1871 (1%) Strand=Plus/Minus Query 76773 TTATCCAATGTAAACTGAATTGGAGAAGATGCGGGTTTTGTACGTAGATAGTACATACCA 76832 || |||| |||||||| || || | ||||||||||| | | ||||||||| || Sbjct 68969 TTGTCCACGGTAAACTGGATCGGTTTGGCAGCGGGTTTTGTTCTCAAATAGTACATGCCT 68910 Query 76833 GTTTTTAGACCCAGACTCCATCCGTAGAAATGCATGCTTGTCAGTTTGGAATAACTAGGA 76892 || || || ||| | ||| |||||||| ||||| | || ||| | || Sbjct 68909 GTCTTAAGCCCCTTGCGCCAGCCGTAGAAGTGCATCGACGAGAGGACACCATATGTTGGT 68850 Query 76893 TCGGCTATATGAATATTCATCGACTGACTTTGATCGATGAAAGCTCCTCTATCAGCCGCC 76952 | | | ||||| |||| |||||| ||||| ||||| || || | ||| || ||| Sbjct 68849 TTTTCGACGTGAATGTTCAAACTCTGACTCTGATCAATGAAGGCCCCACGATCGGCGGCC 68790 Query 76953 ATTTTTATAATGGTCTTTTGAGGAATTTCCCAAATAGTTTTGAAAACTTGTTTGATATCA 77012 || || | || || || | ||| ||||| | || ||| ||| ||||| || Sbjct 68789 ATATTGAGGATCACTTTCTGCGAAATCTCCCAGACCGTCTTGTAAATAGCTTTGAGGTCT 68730 Query 77013 TCTGGAAGGTTTGTA---TTTTGAATGGAACCACCATCTGATATAATTGTATTCTTTATA 77069 || |||| | | || || || ||||| | | | || ||| ||| || || Sbjct 68729 TCAGGAATATCAGGGACGTTCTGGATAGAACCGCAGTTGGCTAAGATTTGATTTTTCATC 68670 Query 77070 TCATCATTCCACAATTTCCTCTCTGTTAAAACTCTAAGGAGATGAGGATTAACTATTTGA 77129 |||| ||||| | |||||| || || | || | ||| | || |||||||| Sbjct 68669 GTTTCATCCCACAGGCCTCGCTCTGTCAAGTCTTTGAGCAAATGGTGGTTGACTATTTGG 68610 Query 77130 AATTCTCCAGACAATACTCTACGAGTGTAAATATTACTGGTATATGGTTCCACAGATTCA 77189 ||||| || || || || | ||| |||||||| || ||| || ||||| | |||||| Sbjct 68609 AATTCGCCCGATAAGACCCGACGGGTGTAAATGTTTGAGGTGTAAGGTTCAATGGATTCA 68550 Query 77190 TTGTTTCCCAAAATTTGAGCAGTAGAAGCAGTTGGCATAGGTGCCACCAATAAACTATTT 77249 |||||||| | || |||||||| ||||| || ||||||||||| | | || || Sbjct 68549 TTGTTTCCAAGGATCTGAGCAGTGGAAGCTGTCGGCATAGGTGCTAAAAGTAGCGAGTTC 68490 Query 77250 CTGAGACCATGTGTTCTGATTTTATCTTTTAGATATTTCCAATCCCAAAGATCTGAAGGT 77309 || | || ||| | || || ||||| || | |||||||||||| | ||| Sbjct 68489 CTAACGCCGTGTTTCGCTATCTTTTCTTTCAGTGCTGCCCAATCCCAAAGGCTGGTAGGC 68430 Query 77310 ACAACATCCCAAAGATCGTATTGTAGAATTCCGTTACTAGCATATGATCCATTATATGTT 77369 ||| ||||| | || || |||| || || || ||| | ||||| || | Sbjct 68429 GTAACGTCCCACATGTCATACTGTAAGATCCCTTTGCTAACGGGACTACCATTGTAAGAC 68370 Query 77370 TCATAAG-GTCCTTCTGTTTCAGCTAGTTCACAACTCGCTTCCAATGCTCCGTAATAAAT 77428 ||||| | |||| |||| | |||| ||||||||| ||||| | || | || ||||| Sbjct 68369 GAATAAGTGCCCTTTTGTT-CTGCTATTTCACAACTTGCTTCGAGCGCAGCATAGTAAAT 68311 Query 77429 TGTTTCGAAAATCTTCTTATTGAG--ATCTTGTGCTTCAATACTATCAAACGGATAATGT 77486 || ||||| |||| |||||||| | |||| |||| || ||||| || || Sbjct 68310 CGTCTCGAATATCTGTTTATTGAGCAAACTTG--CTTCTTCGCTGTCAAAAGGCATCCGT 68253 Query 77487 AAAAGAATAAAGGCATCTGCTAATCCCTGAACTCCAATACCAATAGGTCTATGTCTCTTA 77546 | || || || ||||||||||| || || || || || || || ||||| || | || Sbjct 68252 AGGAGTATGAATGCATCTGCTAAACCTTGTACCCCGATTCCTATGGGTCTGTGGCGACTA 68193 Query 77547 TTGGAAATTTTAGCTTCTGGAATAGGATAATAATTAATGTCTATAATTTTATTGAGATTT 77606 || ||| ||| ||||| || |||||| || || | |||||| ||||||| ||| ||| Sbjct 68192 TTTGAATTTTCCGCTTCCTTAACAGGATAGTAGTTCACGTCTATTATTTTATCGAGGTTT 68133 Query 77607 CTAACAACTACTTTAACCACGTCCTTTAGTTTAAGAAAATC--AAATCTTCCAT----CT 77660 || |||| ||| | ||| || | || ||| || || | |||| | Sbjct 68132 CTCGTTACTAATTTGGTGATGTCTTTCAACATATCAAAGTCGTAAGTTTTCCTGTCGGCC 68073 Query 77661 ATAACAAACATGTTCAAAGCTATAGATGCTAGATTACAAACTGCTACCTCATTAGCGTTG 77720 | || ||||| || | ||||| || |||| ||| || ||||| | || | || || Sbjct 68072 TTGACGAACATATTGACGGCTATCGAAGCTAAATTGCATACTGCGATTTCGTC--CGGTG 68015 Query 77721 --GCATATTGTATTATCTCGGTACATAGATTACTACATTTGATAGTGCCCAGATTTTGTT 77778 | ||||| || || || || |||| |||||||| |||||| || || ||||| |||| Sbjct 68014 AAGTATATTCGATGATTTCCGTGCATAAATTACTACTTTTGATGGTACCAAGATTCTGTT 67955 Query 77779 GGTTGCTCTTTTTATTGCATGAGTCCTTATAAAGAATAAACGGAGTCCCGGTTTCAATCT 77838 ||||||||||| |||| || | || || || | ||| | ||||| || ||||||| | Sbjct 67954 GGTTGCTCTTTCTATTACAGGCATCTTTGTACAACATATAAGGAGTGCCAGTTTCAACTT 67895 Query 77839 GTGATTCGATAATAGATTTCCAGACGACTCTAGCTTTTATCATAGATT--TGTATCGCCT 77896 | ||| | ||||||| |||||| | | ||||||| || | | || |||| || Sbjct 67894 GGGATACAATAATAGCTTTCCAAAGTTCCCTAGCTTGTAC--TTGTTTGATGTAATTCCC 67837 Query 77897 CTCTCTTTCATATTGAGTATATAGCCGTTCAAATTCATCTCCCCAAACATCATCCAATCC 77956 ||| | ||||| | || || |||||||| ||||||||| ||| | || Sbjct 67836 CTCATTCTCATACTTCTCGTAGAGTTTCTCAAATTCTTCTCCCCAACAATCGGAAAGACC 67777 Query 77957 AGGGCATTCATTTGGG--CACATCAATGACCAGTCACCATCTTCCTTAACTCGTTTCATA 78014 || | ||| || | ||||| | ||||| |||||| | | ||||||||||| Sbjct 67776 CGG--AGCCATGTGAGGACACATAAGAGACCAAACACCATTTGAATCTACTCGTTTCATG 67719 Query 78015 AAGAGATCAGGTATCCATAGAGCAATAAATAGATCTCGGGTTCTATGTTCTTCATTTCCT 78074 || | ||| || ||||| | ||| ||||| ||||| | || | |||||| || || Sbjct 67718 AACAAATCTGGGATCCACAATGCATAAAATAAATCTCTTGCTCGGTATTCTTCCTTGCCA 67659 Query 78075 GTATTCTTTTTAAGATCGAGAAACTCCATAATATCAGAATGCCATGGTTCTAGATATATT 78134 || ||||| || | || || ||||| | | ||||| |||||| ||||||| |||||| Sbjct 67658 GTGTTCTTCTTTAAATTAAGGAACTCGAAGACATCAGCATGCCACGGTTCTAAGTATATT 67599 Query 78135 GCCATAACTCCAGGTCGTTTATTACCTCCCTGATCTATATATCTGGCGGTGTTATTATAA 78194 || | |||| ||||||||||| ||||| || || | ||| || || ||| ||||| || Sbjct 67598 GCAAACGCTCCTGGTCGTTTATTGCCTCCTTGGTCGACATACCTTGCCGTGCTATTAAAA 67539 Query 78195 ACTCTCAACATTGGAATAATACCGTTAGATGTTCCATTTGTTCCAGAAATATAACTTCCA 78254 || ||| ||| || | | |||||| || || || || || | |||||| |||| Sbjct 67538 ACCTTCAGCATAGGTACTAGACCGTTCGACACACCGTTAGTGCCTGCAATATATGTTCCT 67479 Query 78255 CTTGCGCGAATATTACTAATGGATATCCCTATTCCTCCTGCCATCTTAGATATTAGAGCG 78314 | || | ||||| || | | || || ||||| || |||||| || |||| Sbjct 67478 TTGGCTCTGATATTGTGAACGTTGACACCAATACCTCCCGCTGACTTAGAAATATAAGCG 67419 Query 78315 CAACGTTTCAATGTATCGTAGATACCCTCTATACTGTCATCCATCATGTTAAGAAGAAAA 78374 || | || | | | |||||||| ||||| || || ||| | ||||||||| Sbjct 67418 CATTGCGCCAGGCAGTTGAAAATACCCTCAATACTATCGTCTGGCATCATTAGAAGAAAA 67359 Query 78375 CAGCTAGACATTTGATGATGAACAGTTCCTGCATTAAATAATGTCGGAGATGCATGCGTA 78434 || ||||| |||| | ||| || || |||||| || ||| ||| || || Sbjct 67358 CAAGAAGACAATTGAGGTCTGGGAGTACCCGCGGAAAATAAAGTTGGACTTGCGTGTGTG 67299 Query 78435 AACCATTTTTCAGAAAGTAGATTGTATGTTTCAATAGCTGATTCTATGTCCCATTGATGA 78494 || || |||| || | | ||| || ||||| ||||| | |||||||| |||| Sbjct 67298 AAATATCTTTCCGATAACAAATTATAAGTTTCTATAGCGGCGTCTATGTCTTCCCCATGA 67239 Query 78495 ATTCCTACCGCTACACGCATCAACATATGCTGAGGTCTTTCAACCGTCTTATTATTTATT 78554 ||||| || || || | ||| | ||| |||||||| | |||||| |||| || ||| Sbjct 67238 ATTCCCACAGCGACTCTCATGAGCATGTGCTGAGGGCGTTCAACAATCTTCCCGTTGATT 67179 Query 78555 TTCAACAAGTATGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCTC 78614 || | || || || || | |||||| ||||| || || ||||| || ||||| || Sbjct 67178 TTGAGCAGATAGGAACGCTCAAGAGTTTTGAAACCGAAGTAATTGTAGGAGAAGTCCCTG 67119 Query 78615 TCGTAAATAAT 78625 || || || || Sbjct 67118 TCATATATGAT 67108 >seq349 Length=550016 Score = 354 bits (392), Expect = 1e-92 Identities = 615/891 (69%), Gaps = 5/891 (1%) Strand=Plus/Minus Query 47835 GACATAACTCCCATTTTTTGATATTCACCCACACGTTTCTCGAAAAAATTAGTTTTGCCT 47894 || ||||| ||| ||| || || || || || |||||||| || ||||||||||| Sbjct 192974 GAAATAACGCCCTCTTTCTGGTACTCGCCGACTTTCTTCTCGAAGAAGTTAGTTTTGCCA 192915 Query 47895 TCCAATGATATATTTTCCATAAAATCAAATGGATTAACTGCATTATAAAtttttttAAAT 47954 || || ||| | ||| ||||| || |||||| | |||||||| |||| | | Sbjct 192914 TCAGTGGAAATAATGGTCATGAAATCGAAAGGATTAGTGGAGTTATAAATCTTTTCACAA 192855 Query 47955 CCTAATTCTGAAATCAGTCTATCTGCAACGAATTCTATATATCTTTTCATCATTTCACAA 48014 || | ||| | || || || || || || ||||| ||||| ||| | | ||| Sbjct 192854 CCGAGTTCAGTAAGCAACCTGTCGGCGACAAATTCGATATACTGGCACATGAGCTTGCAA 192795 Query 48015 TTCATTCCTATAAGTTTAACTGGTAGAGCCTCCGTAAGAAACTCTTGTTCGATAGTGACA 48074 |||||||| || || | || |||| || || | ||||| ||||||||||||| ||| Sbjct 192794 TTCATTCCAATGAGGCTTACGGGTAAGGCATCGGACAGAAATTCTTGTTCGATAGCAACA 192735 Query 48075 GCATCCACTATTATCGATGTTACCGTTTCCTCACTTGGTGGATACAACAAATGTTTAAAC 48134 ||||| ||||| | || |||| | ||| | | | || ||| Sbjct 192734 GCATCTCGAATTATACCTACGACTCGATCCTTAGACGGTTTCTGTACGAGATACGAGAAC 192675 Query 48135 ATTAAACATGCAAAATCACAATGAAGACCTTCATCTCTACTAATTAATTCGTTAGAAAAT 48194 | || || ||||| || ||||| | |||||||||||| || ||||| ||||| ||| Sbjct 192674 AGTAGGCAAGCAAAGTCGCAATGTAACCCTTCATCTCTAGAGATCAATTCATTAGAGAAT 192615 Query 48195 GTGAGACCGGGCATTAGTCCACGTTTTTTGAGCCAAAATATTGCCGCGAAAGATCCAGAA 48254 || | || ||||||| || |||||||| ||||| ||||| |||||||| ||||| Sbjct 192614 GTTAAGCCAGGCATTAAGCCTCGTTTTTTTAGCCAGAATATAGCCGCGAAGCTGCCAGAG 192555 Query 48255 AAGAATATGCCTTCTACGGCCGCAAATGCGGTAAGTCTCTCTCCGTA---ACTGG-CTTC 48310 || ||||| |||||||| || || || ||| | | || || ||| | ||| |||| Sbjct 192554 AAAAATATACCTTCTACCGCTGCGAAGGCGATGATCCTTTCCCCGAATGTACTACTCTTC 192495 Query 48311 GTTGTGTATCCACCGTTGTGCCCAATCAGCCTTCTTCTTTACACAAGGCATTGTTTCTAT 48370 | || |||||| | ||||||||||||||||| |||||||||| || || || Sbjct 192494 GA-GTTTATCCAGTTTAAAGCCCAATCAGCCTTCTTACGAACACAAGGCAGGGTCTCAAT 192436 Query 48371 AGCATTAAAGAGAAAGtttttttCATTGCTATCTTTAACGTAAGTATCTATTAAAAGACT 48430 |||||| || || |||| ||||| || ||| ||| ||||| || || || | || Sbjct 192435 AGCATTGAAAAGGAAGTCTTTTTGTTTAGGATCGGTAATATAAGTTTCGATCAACATGCT 192376 Query 48431 ATACATTTCGGAGTGAATATTTTCAATTGCCATCTGAAATCCGTAAAAACATCTCGCTTC 48490 |||||||| || || ||||| || || || || || || || ||||| || | || || Sbjct 192375 GTACATTTCTGAATGGATATTCTCGATAGCTATTTGGAAACCATAAAAGCAACGTGCCTC 192316 Query 48491 TGTGATCTGTACCTCCGTACAAAATCGTTCAGCCAAATTCTCATTTACTATTCCATCACT 48550 ||| | ||| || || | |||| ||| | | ||||||||||||||||||||| Sbjct 192315 TGTTACCTGAACTTCTTGGCTGAATCTTTCTACTAGATTCTCATTTACTATTCCATCGGA 192256 Query 48551 AGCAGCAAAAAATGCTAATACATGTTTAATAAAATATTTTTCGTTGGAAGTCAGTTTATT 48610 |||||| ||||| || | || ||| || |||| ||||||| || ||| | Sbjct 192255 AGCAGCGAAAAACGCGAGAACGTGTGATATGAAATGCCTTTCGTTATCAGAAAGTCTTAC 192196 Query 48611 CCAGTCATTGATATCTTTTGATATATCTACTTCTTCAGCTGTCCAAAATGATGCCTCTGC 48670 ||||| || ||||| || |||| ||| ||||| || | ||||||||||| || || || Sbjct 192195 CCAGTGATCCATATCCTTAGATAAATCCACTTCCTCTGTGGTCCAAAATGAAGCTTCGGC 192136 Query 48671 TTTTTTATACATATTCCATATATCACTGTATTGGATTGGGAAAATAACAAA 48721 || ||| || | ||| ||||| ||| ||||| ||||| |||||||| Sbjct 192135 TTCTTTGTATTTGGCCCAAATATCGGGGTACTGGATGGGGAATATAACAAA 192085 >seq17 Length=2144227 Score = 120 bits (132), Expect = 4e-22 Identities = 334/498 (67%), Gaps = 17/498 (3%) Strand=Plus/Plus Query 171495 TAGAAGGTTTGGTTTTAAAGGATATTAATGGTATGTACGAGCCCGGAAAACGTAGATGGC 171554 |||||||| |||| || || || || || |||| ||||| || || ||| | ||| Sbjct 1931285 TAGAAGGTCTGGTGTTGAAAGACATGAAAAGTATATACGAACCTGGTAAAAGGCACTGGT 1931344 Query 171555 TTAAAATAAAGAGAGACTACTTGAACGAGGGTTCGATGGCGGATTCTGCAGATCTAGTAG 171614 | || | || | |||||| | || || ||||||||||| | |||||| || | | Sbjct 1931345 TGAAGGTGAAAAAGGACTACCTCTTCGGTGGGGCGATGGCGGATACAGCAGATTTAATCG 1931404 Query 171615 TATTGGGGGCATATTATGGAAAAGGAACAAAGGGTGGAATGATGGCAGTCTTTTTGATGG 171674 | || ||||| | ||||||| ||| | || || ||||||||| | || || ||||||| Sbjct 1931405 TTTTAGGGGCTTGGTATGGAACAGGCAAGAAAGGAGGAATGATGTCCGTTTTCTTGATGG 1931464 Query 171675 GCTGTTATGA--CGATGACTCTGGTAAATGGAAAACTGTGACTAAATGT----TCTGGAC 171728 | || || | ||| || | |||| || || || ||| || |||| | Sbjct 1931465 GTTGCTACAATCCGA--ACAATAAAAAATTCTGCACCGTTACCAAA-GTCCACACTGGTC 1931521 Query 171729 ATGATGATAATACTTTAAGGGCTTTACAGGACCAATTAAAGATGATTAAAATTAATAAGA 171788 |||| ||||| ||| | | ||||| || | | ||| | ||||| | | || Sbjct 1931522 ATGACGATAAAACTCTTGAGAAATTACAAACGGAACTTGACATGGTAAAAATCAGTCAGG 1931581 Query 171789 ACCCCCAAAAAATTCCAGAGTGGTTAGTAGTTAATAAAATATAT-ATTCCCGATTTTGTA 171847 || |||| | |||| |||||| | | | || || | || |||||||| Sbjct 1931582 ACATGTCAAAAGTGCCAGGTTGGTTA-AATTGCACCAAGACGATGGTGCCGGATTTTGTC 1931640 Query 171848 G-TAGAGGATCCTAAACAATC-TCCTATATGGGAGATTTCAGGAGCTGAGTTCACATCAT 171905 | |||| || |||||| |||| ||| ||||||| || | ||||| ||||||||| || Sbjct 1931641 GCTAGA-GACCCTAAA-AATCAACCTGTATGGGAAATCACGGGAGCAGAGTTCACA-CAG 1931697 Query 171906 C-CAAGTCGCATACAGCAAATGGAATATCTATTAGATTTCCTAGATTCACTAGGATTAGA 171964 | | | ||||| || ||||||| ||||| || ||||| ||| | || |||||||| Sbjct 1931698 CACGATGTTCATACGGCGGATGGAATTTCTATCAGGTTTCCAAGAGTTACAAGGATTAGG 1931757 Query 171965 GACGATAAAACATGGAAA 171982 ||||||||| |||||| Sbjct 1931758 GACGATAAAGACTGGAAA 1931775 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 694577850487360