Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anoplophora_20glabripennis_20[refseq_20GCF_5F000390285.1_202013-05- 14] 10,474 sequences; 707,727,967 total letters Query= NC_031465.1 Length=360610 Score E Sequences producing significant alignments: (Bits) Value seq38 120 7e-22 seq747 104 5e-17 >seq38 Length=2283748 Score = 120 bits (132), Expect = 7e-22 Identities = 152/208 (73%), Gaps = 1/208 (0%) Strand=Plus/Minus Query 151897 CAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTA 151956 |||| ||||||||||| || || ||||| || || |||| | || | |||||||||| Sbjct 1208714 CAAG-TGAAGAGTAGATTCCTTCTGGATATTATAGTCGGAAAGTGTGCGTCCATCTTCTA 1208656 Query 151957 GGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAA 152016 | || |||||||| ||||| | ||||| |||| | || ||||| || ||||| | Sbjct 1208655 GCTGCTTGCCGGCGAAAATAAGACGTTGCTGATCCGGAGGAATCCCTTCTTTGTCTTGGA 1208596 Query 152017 TTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGC 152076 |||| |||||| |||| | | |||| || || ||||| | ||| || ||||| | Sbjct 1208595 TTTTGGCCTTGACATTCTCGATGGTGTCAGATGGTTCGACTTCCAAAGTGATGGTTTTCC 1208536 Query 152077 CCGTGAGAGTCTTCACGAAGACCTGCAT 152104 |||| | || |||||||||| |||||| Sbjct 1208535 CCGTCAAGGTTTTCACGAAGATCTGCAT 1208508 Score = 102 bits (112), Expect = 2e-16 Identities = 148/208 (71%), Gaps = 1/208 (0%) Strand=Plus/Minus Query 151897 CAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTA 151956 |||| ||||| || || ||||||||||| ||||| || | | || | |||||||||| Sbjct 1209170 CAAG-TGAAGGGTGGATTCTTTTTGGATATTGTAGTCAGAAAGGGTGCGTCCATCTTCTA 1209112 Query 151957 GGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAA 152016 | || ||||| || ||||| | |||||||| | | || || ||||| ||||| | Sbjct 1209111 GCTGCTTGCCGGCAAAAATAAGACGTTGCTGGTCTGGGGGAATCCCCTCCTTGTCTTGGA 1209052 Query 152017 TTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGC 152076 |||| ||||| |||| | | | || || || ||||| ||||| || || || | Sbjct 1209051 TTTTGGCCTTGACGTTCTCAATGGTATCGGATGGTTCGACTTCCAGAGTGATGGTCTTTC 1208992 Query 152077 CCGTGAGAGTCTTCACGAAGACCTGCAT 152104 |||| | || || ||||||| |||||| Sbjct 1208991 CCGTCAAGGTTTTTACGAAGATCTGCAT 1208964 Score = 100 bits (110), Expect = 7e-16 Identities = 141/198 (71%), Gaps = 0/198 (0%) Strand=Plus/Minus Query 151908 GTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTAGGCTTTTCCCG 151967 || || || || ||||||||||| || | || || | ||| || || | ||| ||| Sbjct 1208476 GTGGATTCCTTCTGGATGTTGTAGTCCGACAAGGTACGCCCGTCCTCCAACTGTTTGCCG 1208417 Query 151968 GCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAATTTTTTGTTTG 152027 |||||||| | ||||||||| || | | ||| || || || || || || || || Sbjct 1208416 GCGAAGATCAACCTCTGCTGATCGGGAGGGATGCCCTCTTTGTCCTGGATCTTGGCCTTC 1208357 Query 152028 ACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGCCCGTGAGAGTC 152087 || |||| | | |||| || ||| || || || || |||||||| || || || ||| Sbjct 1208356 ACGTTCTCGATGGTGTCGGACGGCTCCACCTCGAGGGTGATAGTTTTACCAGTCAGTGTC 1208297 Query 152088 TTCACGAAGACCTGCATT 152105 |||||||||| ||||||| Sbjct 1208296 TTCACGAAGATCTGCATT 1208279 >seq747 Length=644639 Score = 104 bits (114), Expect = 5e-17 Identities = 149/209 (71%), Gaps = 1/209 (0%) Strand=Plus/Minus Query 151897 CAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTA 151956 |||| ||||| |||||||| || ||||||||||| || | || || | |||||||| | Sbjct 453141 CAAG-TGAAGGGTAGACTCCTTCTGGATGTTGTAGTCAGACAATGTACGTCCATCTTCAA 453083 Query 151957 GGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAA 152016 | ||| || |||||||| || | ||||| || | | || || || || ||||| | Sbjct 453082 GTTGTTTACCAGCGAAGATCAGACGTTGCTGATCTGGAGGAATCCCCTCTTTGTCTTGGA 453023 Query 152017 TTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGC 152076 |||| ||| ||| | || | | || || || || || || || |||||||| | Sbjct 453022 TTTTAGCTTTCACATTTTCGATAGTATCAGATGGTTCGACCTCTAGCGTGATAGTTTTCC 452963 Query 152077 CCGTGAGAGTCTTCACGAAGACCTGCATT 152105 ||||||| || |||||||| | |||||| Sbjct 452962 CCGTGAGGGTTTTCACGAAAATTTGCATT 452934 Score = 84.2 bits (92), Expect = 5e-11 Identities = 144/208 (69%), Gaps = 1/208 (0%) Strand=Plus/Plus Query 151897 CAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTA 151956 |||| ||||| || || || |||||||| ||||| || | ||| | ||||||||||| Sbjct 465988 CAAG-TGAAGGGTTGATTCCTTTTGGATATTGTAGTCAGAAGGAGTGCGCCCATCTTCTA 466046 Query 151957 GGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAA 152016 | ||| || |||||||| | | ||| || || | | || ||||| || || || | Sbjct 466047 GTTGTTTACCCGCGAAGATCAAACGCTGTTGATCGGGAGGAATACCTTCTTTGTCCTGGA 466106 Query 152017 TTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGC 152076 |||| ||| || | |||| ||| ||| ||| || || || || || || || | Sbjct 466107 TTTTAGCTTTAACGTTTTCTATTGGGTCAGAAGGCTCGACCTCTAGCGTGATGGTCTTAC 466166 Query 152077 CCGTGAGAGTCTTCACGAAGACCTGCAT 152104 |||| || || || ||||| | ||||| Sbjct 466167 CCGTTAGGGTTTTTACGAAAATTTGCAT 466194 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1153665959412054