Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anoplophora_20glabripennis_20[refseq_20GCF_5F000390285.1_202013-05- 14] 10,474 sequences; 707,727,967 total letters Query= NC_031761.1 Length=131855 Score E Sequences producing significant alignments: (Bits) Value seq38 125 6e-24 seq365 86.0 5e-12 >seq38 Length=2283748 Score = 125 bits (138), Expect = 6e-24 Identities = 164/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 111100 ATGCAAATTTTTGTCAAAACGTTGACCGGCAAAACCATTACCGTGGAAACGGAACCCAGC 111159 ||||| || ||||| ||||| ||||| ||||| ||||| ||| |||| ||||| | Sbjct 1208736 ATGCAGATCTTTGTAAAAACCTTGACGGGCAAGACCATCACCTTGGAGGTCGAACCGTCC 1208795 Query 111160 GATTCTGTTGGCCAGGTAAAACAAAAAATTGCCGACAAAGAAGGCGTTCCCGTCGATCAA 111219 ||| || ||| | || || |||||| ||||||||||| ||||| || || Sbjct 1208796 GATACTATTGAAAACGTGAAGGCCAAAATTCAAGACAAAGAAGGGATTCCCCCAGACCAG 1208855 Query 111220 CAAAGGCTTATTTATGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAAT 111279 ||| | ||||||| ||| |||||||| | |||||| | ||| | |||| |||||| Sbjct 1208856 CAACGACTTATTTTTGCCGGCAAACAGCTAGAAGATGGTCGCACTCTCTCCGACTATAAT 1208915 Query 111280 ATACAAAAAGAATCTACACTACATTTAGTGTTGCGTCTGCGCGGTGG 111326 || || |||||||| || || || || ||| | ||||| || ||||| Sbjct 1208916 ATTCAGAAAGAATCGACCCTTCACTTGGTGCTCCGTCTTCGTGGTGG 1208962 Score = 118 bits (130), Expect = 9e-22 Identities = 164/230 (71%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 111099 AATGCAAATTTTTGTCAAAACGTTGACCGGCAAAACCATTACCGTGGAAACGGAACCCAG 111158 ||||||||| ||||||||||| ||||| || || ||||| ||| |||| ||||| Sbjct 1209191 AATGCAAATCTTTGTCAAAACCTTGACGGGAAAGACCATCACCTTGGAGGTTGAACCGTC 1209250 Query 111159 CGATTCTGTTGGCCAGGTAAAACAAAAAATTGCCGACAAAGAAGGCGTTCCCGTCGATCA 111218 |||| | ||| | || || ||||| ||||||||||| ||||| ||||| Sbjct 1209251 CGATACCATTGAGAACGTGAAGGCCAAAATCCAAGACAAAGAAGGGATTCCCCCAGATCA 1209310 Query 111219 ACAAAGGCTTATTTATGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAA 111278 ||| | ||||||| ||| ||||| || | |||||| || | |||| || || Sbjct 1209311 GCAACGTCTTATTTTTGCCGGCAAGCAGCTAGAAGATGGACGCACCCTTTCCGACTACAA 1209370 Query 111279 TATACAAAAAGAATCTACACTACATTTAGTGTTGCGTCTGCGCGGTGGCA 111328 ||| ||||||||||| || || || || || ||||||| || ||||||| Sbjct 1209371 TATCCAAAAAGAATCCACCCTTCACTTGGTTCTGCGTCTCCGTGGTGGCA 1209420 >seq365 Length=450407 Score = 86.0 bits (94), Expect = 5e-12 Identities = 166/244 (68%), Gaps = 1/244 (0%) Strand=Plus/Plus Query 111097 AAAATGCAAATTTTTGTCAAAACGTTGACCGGCAAAACCATTACCGTGGAAACGGAACCC 111156 || ||||| |||||||| ||||| ||||| || || ||||| ||| | || ||||| Sbjct 426272 AACATGCAGATTTTTGTAAAAACTTTGACAGGTAAGACCATCACCCTTGAGGTTGAACCG 426331 Query 111157 AGCGATTCTGTTGGCCAGGTAAAACAAAAAATTGCCGACAAAGAAGGCGTTCCCGTCGAT 111216 ||| | | | | || ||| ||| || ||||||||||| | ||| ||| Sbjct 426332 TCAGATACCATCGAGAATGTCAAAGCAAAGATCCAAGACAAAGAAGGTATCCCCCCTGAT 426391 Query 111217 CAACAAAGGCTTATTTATGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTAT 111276 || ||| | || |||| || || ||||| || |||||| || | |||| ||| Sbjct 426392 CAGCAACGTCTAATTTTCGCTGGGAAACAGTTAGAAGATGGACGTACCTTATCCGACTAT 426451 Query 111277 AATATACAAAAAGAATCTACACTACATTTAGTGTTGCGTCTGCGCGGTGGCAATAAATAA 111336 || || || || ||||| || || ||| | |||||| | || || |||||| | || || Sbjct 426452 AACATTCAGAAGGAATCAACGCTTCATCTCGTGTTGAGACTCCGTGGTGGCGCT-AAGAA 426510 Query 111337 ACGT 111340 |||| Sbjct 426511 ACGT 426514 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 421757355009424