Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anoplophora_20glabripennis_20[refseq_20GCF_5F000390285.1_202013-05- 14] 10,474 sequences; 707,727,967 total letters Query= NC_033775.1 Length=376207 Score E Sequences producing significant alignments: (Bits) Value seq365 187 6e-42 seq38 159 8e-34 seq747 152 1e-31 >seq365 Length=450407 Score = 187 bits (206), Expect = 6e-42 Identities = 171/216 (79%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || ||||| || |||||| | ||||| || || |||||||| ||||| ||| ||||| Sbjct 426278 CAGATTTTTGTAAAAACTTTGACAGGTAAGACCATCACCCTTGAGGTTGAACCGTCAGAT 426337 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 ||||||||||| |||||| |||||| || ||||||||||| ||||| || || |||||| Sbjct 426338 ACCATCGAGAATGTCAAAGCAAAGATCCAAGACAAAGAAGGTATCCCCCCTGATCAGCAA 426397 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || || || ||||| || |||||| | ||||||||| | || | |||| |||||| | Sbjct 426398 CGTCTAATTTTCGCTGGGAAACAGTTAGAAGATGGACGTACCTTATCCGACTATAACATT 426457 Query 178104 CAAAAAGAATCAACACTGCATCTTGTTTTGAGACTC 178139 || || |||||||| || ||||| || ||||||||| Sbjct 426458 CAGAAGGAATCAACGCTTCATCTCGTGTTGAGACTC 426493 >seq38 Length=2283748 Score = 159 bits (176), Expect = 8e-34 Identities = 161/208 (77%), Gaps = 1/208 (0%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || || ||||||||||| | || || ||||| ||||| | || || ||| || ||| Sbjct 1208511 CAGATCTTCGTGAAAACCTTGACGGGGAAAACCATCACTTTGGAAGTCGAACCATCTGAC 1208570 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 ||||||||||| ||||| || || || ||||||||||| || |||||||| |||||| Sbjct 1208571 ACCATCGAGAATGTCAAGGCCAAAATCCAAGACAAAGAAGGGATTCCTCCGGATCAGCAA 1208630 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || ||||| |||||||| || ||||| ||||||||| | || ||| |||| ||||| || Sbjct 1208631 CGTCTTATTTTCGCCGGCAAGCAGCTAGAAGATGGACGCACACTTTCCGACTATAATATC 1208690 Query 178104 CAAAAAGAATCAACACTGCATCTTGTTT 178131 || || ||||| || || || |||| || Sbjct 1208691 CAGAAGGAATCTACTCTTCA-CTTGGTT 1208717 Score = 147 bits (162), Expect = 5e-30 Identities = 158/208 (76%), Gaps = 1/208 (0%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 ||||| || || ||||| | || ||||| || |||||| | ||||| ||| || || Sbjct 1209195 CAAATCTTTGTCAAAACCTTGACGGGAAAGACCATCACCTTGGAGGTTGAACCGTCCGAT 1209254 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 ||||| |||||||| || || || || ||||||||||| || || || || |||||| Sbjct 1209255 ACCATTGAGAACGTGAAGGCCAAAATCCAAGACAAAGAAGGGATTCCCCCAGATCAGCAA 1209314 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || ||||| || ||||| || ||||| ||||||||| | || ||| |||| || || || Sbjct 1209315 CGTCTTATTTTTGCCGGCAAGCAGCTAGAAGATGGACGCACCCTTTCCGACTACAATATC 1209374 Query 178104 CAAAAAGAATCAACACTGCATCTTGTTT 178131 ||||||||||| || || || |||| || Sbjct 1209375 CAAAAAGAATCCACCCTTCA-CTTGGTT 1209401 Score = 145 bits (160), Expect = 2e-29 Identities = 158/206 (77%), Gaps = 3/206 (1%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || || |||||||| || || || || ||||| ||||||||||||||||| || ||| Sbjct 1208283 CAGATCTTCGTGAAGACACTGACTGGTAAAACTATCACCCTCGAGGTGGAGCCGTCCGAC 1208342 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 |||||||||||||| || ||||| ||||||||||| || |||||||| || ||||| Sbjct 1208343 ACCATCGAGAACGTGAAGGCCAAGATCCAGGACAAAGAGGGCATCCCTCCCGATCAGCAG 1208402 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTG-CCGATTATAACGT 178102 | | ||||||||||| |||||| | || || || | || |||| | || || ||| | Sbjct 1208403 AGGTTGATCTTCGCCGGCAAACAGTTGGAGGACGGGCGTAC-CTTGTCGGACTACAACAT 1208461 Query 178103 CCAAAAAGAATCAACACTGCATCTTG 178128 ||| || ||||| || |||| |||| Sbjct 1208462 CCAGAAGGAATCCACCTTGCA-CTTG 1208486 Score = 138 bits (152), Expect = 3e-27 Identities = 156/208 (75%), Gaps = 1/208 (0%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || || ||||| ||||| | || ||||| || ||||| || || || ||| || || Sbjct 1208967 CAGATCTTCGTAAAAACCTTGACGGGAAAGACCATCACTCTGGAAGTCGAACCATCCGAT 1209026 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 ||||| ||||||||||| || || || ||||| || || || || || ||||||||| Sbjct 1209027 ACCATTGAGAACGTCAAGGCCAAAATCCAAGACAAGGAGGGGATTCCCCCAGACCAGCAA 1209086 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || ||||| || ||||| || ||||| ||||||||| | || ||| | || || || || Sbjct 1209087 CGTCTTATTTTTGCCGGCAAGCAGCTAGAAGATGGACGCACCCTTTCTGACTACAATATC 1209146 Query 178104 CAAAAAGAATCAACACTGCATCTTGTTT 178131 ||||||||||| || || || |||| || Sbjct 1209147 CAAAAAGAATCCACCCTTCA-CTTGGTT 1209173 Score = 136 bits (150), Expect = 1e-26 Identities = 154/205 (75%), Gaps = 1/205 (0%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || || || || ||||| | || || || || |||||| | ||||| ||| || || Sbjct 1208739 CAGATCTTTGTAAAAACCTTGACGGGCAAGACCATCACCTTGGAGGTCGAACCGTCCGAT 1208798 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || || || ||||| || || ||||| ||||||||||| || || || ||||||||| Sbjct 1208799 ACTATTGAAAACGTGAAGGCCAAAATTCAAGACAAAGAAGGGATTCCCCCAGACCAGCAA 1208858 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 |||||||| || ||||| |||||||| |||||||| | ||||| |||| ||||| | Sbjct 1208859 CGACTTATTTTTGCCGGCAAACAGCTAGAAGATGGTCGCACTCTCTCCGACTATAATATT 1208918 Query 178104 CAAAAAGAATCAACACTGCATCTTG 178128 || |||||||| || || || |||| Sbjct 1208919 CAGAAAGAATCGACCCTTCA-CTTG 1208942 Score = 111 bits (122), Expect = 4e-19 Identities = 148/206 (72%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || || ||||||||||| || || || || || ||||| | || || ||| || ||| Sbjct 1209423 CAGATCTTCGTGAAAACCCTGACCGGCAAGACCATCACTTTGGAAGTCGAACCATCTGAC 1209482 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 |||||||| || || ||| || || || ||||| || || || || || || ||||| Sbjct 1209483 ACCATCGAAAATGTGAAAGCGAAAATCCAAGACAAGGAGGGGATTCCCCCAGATCAGCAG 1209542 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 | | ||||| ||||| || ||||| ||||| || | || ||| |||| |||||| | Sbjct 1209543 AGGTTGATCTTTGCCGGCAAGCAGCTGGAAGACGGTCGTACCCTTTCCGACTATAACATT 1209602 Query 178104 CAAAAAGAATCAACACTGCATCTTGT 178129 || || || || || || ||||| || Sbjct 1209603 CAGAAGGAGTCGACGCTCCATCTAGT 1209628 >seq747 Length=644639 Score = 152 bits (168), Expect = 1e-31 Identities = 160/209 (77%), Gaps = 1/209 (0%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 ||||||||||| ||||| ||||| || ||||| ||||| || ||||| || || ||| Sbjct 462715 CAAATTTTCGTAAAAACCCTCACGGGTAAAACTATCACGCTAGAGGTCGAGCCTTCTGAC 462656 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || || || ||||| ||| || || ||||||||||| || || ||||| || || || Sbjct 462655 ACAATAGAAAACGTTAAAGCTAAAATCCAGGACAAAGAGGGCATTCCTCCTGATCAACAG 462596 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || | |||||||| || ||||| || ||||||||| | |||||| | || || || || Sbjct 462595 CGTTTGATCTTCGCAGGCAAACAACTTGAAGATGGACGTACTCTTTCTGACTACAATATC 462536 Query 178104 CAAAAAGAATCAACACTGCATCTTGTTTT 178132 ||||| |||||||| || || |||| ||| Sbjct 462535 CAAAAGGAATCAACCCTTCA-CTTGGTTT 462508 Score = 141 bits (156), Expect = 2e-28 Identities = 155/205 (76%), Gaps = 1/205 (0%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 ||||||||||||||||| ||||| || ||||| ||||| || ||||| ||| || || Sbjct 452938 CAAATTTTCGTGAAAACCCTCACGGGGAAAACTATCACGCTAGAGGTCGAACCATCTGAT 452997 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || ||||| || || ||| || || || |||||||| || || ||||| || |||||| Sbjct 452998 ACTATCGAAAATGTGAAAGCTAAAATCCAAGACAAAGAGGGGATTCCTCCAGATCAGCAA 453057 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || || |||||||| || ||||| || ||||||||| | || | | || || ||| || Sbjct 453058 CGTCTGATCTTCGCTGGTAAACAACTTGAAGATGGACGTACATTGTCTGACTACAACATC 453117 Query 178104 CAAAAAGAATCAACACTGCATCTTG 178128 || || || || || || || |||| Sbjct 453118 CAGAAGGAGTCTACCCTTCA-CTTG 453141 Score = 134 bits (148), Expect = 3e-26 Identities = 156/209 (75%), Gaps = 1/209 (0%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 ||||||||||| ||||| || || || || || ||||| || ||||| || || ||| Sbjct 466191 CAAATTTTCGTAAAAACCCTAACGGGTAAGACCATCACGCTAGAGGTCGAGCCTTCTGAC 466132 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 | || || ||||| ||| || || |||||||||||||| || ||||| || || || Sbjct 466131 CCAATAGAAAACGTTAAAGCTAAAATCCAGGACAAAGAAGGTATTCCTCCCGATCAACAG 466072 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || | |||||||| || ||||| || |||||||| | |||| | | || || || || Sbjct 466071 CGTTTGATCTTCGCGGGTAAACAACTAGAAGATGGGCGCACTCCTTCTGACTACAATATC 466012 Query 178104 CAAAAAGAATCAACACTGCATCTTGTTTT 178132 ||||| |||||||| || || |||| ||| Sbjct 466011 CAAAAGGAATCAACCCTTCA-CTTGGTTT 465984 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1203569661529956