Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anoplophora_20glabripennis_20[refseq_20GCF_5F000390285.1_202013-05- 14] 10,474 sequences; 707,727,967 total letters Query= NC_033780.1 Length=144510 Score E Sequences producing significant alignments: (Bits) Value seq38 123 2e-23 seq747 109 5e-19 seq365 93.3 4e-14 >seq38 Length=2283748 Score = 123 bits (136), Expect = 2e-23 Identities = 164/228 (72%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 41635 GCCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGA 41694 ||| || || ||||| | |||| |||| ||| |||||||| ||||| ||||| || Sbjct 1208507 GCCACCACGGAGACGGAGTACCAAGTGCAAGGTGGATTCCTTCTGGATGTTGTAGTCCGA 1208448 Query 41695 GAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGG 41754 | ||| ||| |||| || | ||| ||||||||||| |||| | ||| || || | || Sbjct 1208447 CAAGGTACGCCCGTCCTCCAACTGTTTGCCGGCGAAGATCAACCTCTGCTGATCGGGAGG 1208388 Query 41755 AACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGACACAGTGTCGCTCGACTCCAC 41814 | || ||| |||||| ||| || ||||| | | |||||| || |||||| Sbjct 1208387 GATGCCCTCTTTGTCCTGGATCTTGGCCTTCACGTTCTCGATGGTGTCGGACGGCTCCAC 1208328 Query 41815 CTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 ||| | || || |||||||| ||||| ||||| ||||| |||||||| Sbjct 1208327 CTCGAGGGTGATAGTTTTACCAGTCAGTGTCTTCACGAAGATCTGCAT 1208280 Score = 122 bits (134), Expect = 8e-23 Identities = 166/229 (72%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 || || || || || | ||| ||||| ||||| |||||||||||||||||||||||| Sbjct 1209646 CCTCCACGGAGTCGAAGCACTAGATGGAGCGTCGACTCCTTCTGAATGTTATAGTCGGAA 1209587 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755 ||||| || |||| || |||||||||||||| || |||| | ||| || || | |||| Sbjct 1209586 AGGGTACGACCGTCTTCCAGCTGCTTGCCGGCAAAGATCAACCTCTGCTGATCTGGGGGA 1209527 Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCAC 41814 | | |||||||| | || |||| |||| || | | ||||| | || || Sbjct 1209526 ATCCCCTCCTTGT-CTTGGATTTTCGCTTTCACATTTTCGATGGTGTCAGATGGTTCGAC 1209468 Query 41815 CTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCATG 41863 |||| || || || || || ||||| || || ||||| ||||||||| Sbjct 1209467 TTCCAAAGTGATGGTCTTGCCGGTCAGGGTTTTCACGAAGATCTGCATG 1209419 Score = 111 bits (122), Expect = 1e-19 Identities = 163/228 (71%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 || || || ||||| | ||||| || || || || |||||||| |||||||||||| Sbjct 1208962 CCACCACGAAGACGGAGCACCAAGTGAAGGGTCGATTCTTTCTGAATATTATAGTCGGAG 1208903 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755 || ||||| | || || ||||| |||||||| || || || || || ||||| | |||| Sbjct 1208902 AGAGTGCGACCATCTTCTAGCTGTTTGCCGGCAAAAATAAGTCGTTGCTGGTCTGGGGGA 1208843 Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCAC 41814 | | || |||| | ||| |||| || | ||| | | ||| ||| || || || Sbjct 1208842 ATCCCTTCTTTGT-CTTGAATTTTGGCCTTCACGTTTTCAATAGTATCGGACGGTTCGAC 1208784 Query 41815 CTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 ||||| || || || || ||||||| || ||||| || |||||||| Sbjct 1208783 CTCCAAGGTGATGGTCTTGCCCGTCAAGGTTTTTACAAAGATCTGCAT 1208736 Score = 100 bits (110), Expect = 3e-16 Identities = 159/228 (70%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 || || |||||||| | |||| || || || |||||||| || ||||||||||| Sbjct 1208734 CCACCACGTAGACGCAGAACCAAGTGAAGAGTAGATTCCTTCTGGATATTATAGTCGGAA 1208675 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755 || ||||| | || || ||||||||||||||||| || || || || || |||| ||| Sbjct 1208674 AGTGTGCGTCCATCTTCTAGCTGCTTGCCGGCGAAAATAAGACGTTGCTGATCCGGAGGA 1208615 Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGACACAGTGTCGCTCGACTCCACC 41815 | | || ||||| |||||| ||| | | | ||||| | || || Sbjct 1208614 ATCCCTTCTTTGTCTTGGATTTTGGCCTTGACATTCTCGATGGTGTCAGATGGTTCGACT 1208555 Query 41816 TCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCATG 41863 |||| || || ||||| ||||||| || || ||||| ||||||||| Sbjct 1208554 TCCAAAGTGATGGTTTTCCCCGTCAAGGTTTTCACGAAGATCTGCATG 1208507 Score = 100 bits (110), Expect = 3e-16 Identities = 162/231 (70%), Gaps = 8/231 (3%) Strand=Plus/Minus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 || || || ||||||| |||| || || ||| || || || || || ||||| || Sbjct 1209190 CCACCACGGAGACGTAGAACCAAGTGAAGGGTGGATTCTTTTTGGATATTGTAGTCAGAA 1209131 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755 |||||||| | || || |||||||||||||| || || || || || ||||| | |||| Sbjct 1209130 AGGGTGCGTCCATCTTCTAGCTGCTTGCCGGCAAAAATAAGACGTTGCTGGTCTGGGGGA 1209071 Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACG-ACACA---GTGTCGCTCGACTC 41811 | | ||||||||| |||||| ||| |||| | || || ||| | || Sbjct 1209070 ATCCCCTCCTTGTCTTGGATTTTGGCCTT----GACGTTCTCAATGGTATCGGATGGTTC 1209015 Query 41812 CACCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 || |||| || || || || ||||||| || |||||||| |||||||| Sbjct 1209014 GACTTCCAGAGTGATGGTCTTTCCCGTCAAGGTTTTTACGAAGATCTGCAT 1208964 Score = 87.8 bits (96), Expect = 2e-12 Identities = 156/228 (68%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 41635 GCCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGA 41694 ||| || || ||||| | |||| || || ||| || || || || || |||||||| Sbjct 1209419 GCCACCACGGAGACGCAGAACCAAGTGAAGGGTGGATTCTTTTTGGATATTGTAGTCGGA 1209360 Query 41695 GAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGG 41754 |||||||| | || || |||||||||||||| || || || || || || || | ||| Sbjct 1209359 AAGGGTGCGTCCATCTTCTAGCTGCTTGCCGGCAAAAATAAGACGTTGCTGATCTGGGGG 1209300 Query 41755 AACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGACACAGTGTCGCTCGACTCCAC 41814 || | || ||||| |||||| ||||| | | || ||| || || || Sbjct 1209299 AATCCCTTCTTTGTCTTGGATTTTGGCCTTCACGTTCTCAATGGTATCGGACGGTTCAAC 1209240 Query 41815 CTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 ||||| || || || || ||||||| || || || || || ||||| Sbjct 1209239 CTCCAAGGTGATGGTCTTTCCCGTCAAGGTTTTGACAAAGATTTGCAT 1209192 >seq747 Length=644639 Score = 109 bits (120), Expect = 5e-19 Identities = 163/229 (71%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 41635 GCCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGA 41694 |||||| | | ||||| |||| || || || ||||| || || || ||||| || Sbjct 462491 GCCGCCCCTCAACCGTAAAACCAAGTGAAGGGTTGATTCCTTTTGGATATTGTAGTCAGA 462550 Query 41695 GAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGG 41754 || || || | || || || || ||||| ||||| |||| |||||||| || | || Sbjct 462551 AAGAGTACGTCCATCTTCAAGTTGTTTGCCTGCGAAGATCAAACGCTGTTGATCAGGAGG 462610 Query 41755 AACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCA 41813 || || ||| |||||| |||||| |||| |||| | | ||||| | ||| | Sbjct 462611 AATGCCCTCTTTGTCCTGGATTTTA-GCTTTAACGTTTTCTATTGTGTCAGAAGGCTCGA 462669 Query 41814 CCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 |||| | ||| || ||||||||||| || || ||||||||||| ||||| Sbjct 462670 CCTCTAGCGTGATAGTTTTACCCGTGAGGGTTTTTACGAAAATTTGCAT 462718 Score = 95.1 bits (104), Expect = 1e-14 Identities = 161/231 (70%), Gaps = 2/231 (1%) Strand=Plus/Plus Query 41633 CCGCCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCG 41692 |||||||| | | ||||| |||| || || || ||||| || || || ||||| Sbjct 465965 CCGCCGCCCCTCAACCGTAAAACCAAGTGAAGGGTTGATTCCTTTTGGATATTGTAGTCA 466024 Query 41693 GAGAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCG 41752 || | |||||| | || || || || || || ||||| |||| |||||||| || | Sbjct 466025 GAAGGAGTGCGCCCATCTTCTAGTTGTTTACCCGCGAAGATCAAACGCTGTTGATCGGGA 466084 Query 41753 GGAACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTC 41811 |||| | || |||||| |||||| |||| |||| | | | ||| | ||| Sbjct 466085 GGAATACCTTCTTTGTCCTGGATTTTA-GCTTTAACGTTTTCTATTGGGTCAGAAGGCTC 466143 Query 41812 CACCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 ||||| | ||| || || |||||||| || || ||||||||||| ||||| Sbjct 466144 GACCTCTAGCGTGATGGTCTTACCCGTTAGGGTTTTTACGAAAATTTGCAT 466194 >seq365 Length=450407 Score = 93.3 bits (102), Expect = 4e-14 Identities = 162/233 (70%), Gaps = 2/233 (1%) Strand=Plus/Minus Query 41634 CGCCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGG 41693 |||| || || || | ||||| ||||| ||||| |||||||||||||||||||||| Sbjct 426503 CGCCACCACGGAGTCTCAACACGAGATGAAGCGTTGATTCCTTCTGAATGTTATAGTCGG 426444 Query 41694 AGAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGG 41753 | | ||| || | || || | ||| || || ||||| || || || || || || | || Sbjct 426443 ATAAGGTACGTCCATCTTCTAACTGTTTCCCAGCGAAAATTAGACGTTGCTGATCAGGGG 426384 Query 41754 GAACGCTCTCCTTGTCCATGATTTTTTGCTTCAAC-GACGACACAGTGTCGCTCGACTCC 41812 | | | || |||| | || | ||||||| || | | || || || || Sbjct 426383 GGATACCTTCTTTGT-CTTGGATCTTTGCTTTGACATTCTCGATGGTATCTGACGGTTCA 426325 Query 41813 ACCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCATGTT 41865 ||||| | || || || ||||| |||| || ||||| |||||||||||||| Sbjct 426324 ACCTCAAGGGTGATGGTCTTACCTGTCAAAGTTTTTACAAAAATCTGCATGTT 426272 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 462243472848800