Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Apis_20cerana_20[refseq_20GCF_5F001442555.1_202015-11-12] 2,431 sequences; 228,331,812 total letters Query= NC_001132.2 Length=161773 Score E Sequences producing significant alignments: (Bits) Value seq613 113 5e-20 >seq613 Length=358256 Score = 113 bits (124), Expect = 5e-20 Identities = 143/197 (73%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 16792 TAATCTATCCGCTACAAATTCTATATATTGGCACATTAATTCGCAGTTCATTCCTATAAG 16851 ||||||||| || |||||||| |||||||| ||||| | || |||||||| ||||| | Sbjct 259403 TAATCTATCTGCAACAAATTCGATATATTGACACATAAGTTTACAGTTCATGCCTATCAT 259462 Query 16852 ACGTACCGGAAGAGCTTCCGTCAAAAATCGTTGCTCTATAACAACCGCTTCCTTAATAAT 16911 || || | || || || |||||| ||| || || || || ||||||||||| Sbjct 259463 TTCAACAGGTAATGCATCTGTTAAAAATTCTTGTTCAATTTTGACAGCATCCTTAATAAT 259522 Query 16912 ACTAGCAACTCGTTCCTCGGACGGTGTATGTTTAAGATGTTTAAACATCAGACATGCGAA 16971 | |||||||| || ||| | ||| || ||||| ||||| | |||||| || Sbjct 259523 TGATGTGACTCGTTCACAAGATGGTTTTTGTACAATGTGTTTGAACATTAAACATGCAAA 259582 Query 16972 ATCGCAATGTAATCCCT 16988 ||| ||||||||||||| Sbjct 259583 ATCACAATGTAATCCCT 259599 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 517529873083080