Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Apis_20cerana_20[refseq_20GCF_5F001442555.1_202015-11-12] 2,431 sequences; 228,331,812 total letters Query= NC_001993.1 Length=236120 Score E Sequences producing significant alignments: (Bits) Value seq546 197 2e-45 seq1766 178 2e-39 seq3 159 5e-34 seq2021 145 1e-29 seq2209 143 4e-29 seq2420 113 7e-20 >seq546 Length=368327 Score = 197 bits (218), Expect = 2e-45 Identities = 385/556 (69%), Gaps = 17/556 (3%) Strand=Plus/Minus Query 203113 ATGTTCATTTAGTGTTTTTATTGCCCAATTATTAGCACCATTTATATTATCGTAATTTTC 203172 ||| | ||||| ||||| ||| |||||| || ||||| | || ||| || |||| Sbjct 22319 ATGCTTATTTAATGTTTCTATAGCCCAAGGATAGGCACCTTCAATCAAATCATATTTTTT 22260 Query 203173 ATTATAATAACAAAAATTATCACATAGTTCTTTACGAATAATAGCTTCTTC-ACAAAAAA 203231 ||||||| | ||||||||||||| |||||||| | ||| ||||||||||| | ||| | Sbjct 22259 ATTATAAAAGCAAAAATTATCACTAAGTTCTTTTCTAATGATAGCTTCTTCCATAAAGGA 22200 Query 203232 CTTCTACCGATTTAGGATATAATTTTTTATATTTGTTAATTTCTAATATTATTCTTTGAG 203291 || | || || || ||||||||||||||| | || ||||| || || | ||| Sbjct 22199 CT-CAACTGACTTTTTATATAATTTTTTATACTCTTTTATTTCCAAAATACAACGTTGTA 22141 Query 203292 TTGAAATTTGACCAAAATGTATCCATGGTGATAAATTACTTATTGCATTAGCATTTGGAT 203351 ||| || |||||||| | ||| |||||||||||||| || ||||| | |||| Sbjct 22140 CTGAGATCATGCCAAAATGAAACCAGGGTGATAAATTACTGATGGCATTTGATAAAGGAT 22081 Query 203352 CATTTCtttttttagcataatcttttaatctattttgtataaatatatctaatattttaa 203411 ||| || | |||| |||||| | ||| |||| || | || | | |||| Sbjct 22080 TATTATGTTCATCTCCATATCTTTTTAAACGATTCTGTAAGAAATTTTCAAGTTCCTTAA 22021 Query 203412 atgcatattttGTA-CCAGATTTTGCCCAAGAAACAGGTTTAACATTTCTATCAATATTT 203470 ||| |||| || || | || ||||| | || ||| || |||| || || Sbjct 22020 TACCAT-TTTTATATCCTGGCTTAGCCCATGTAATTTCTTTTACTGACTTATC--TACTT 21964 Query 203471 AATGATTGTTCT---GCttttttccaattattattt----attttaatatatgtattata 203523 ||| |||| ||| ||||||||||||| ||| | || | | ||| |||| Sbjct 21963 CTACATT-TTCTAAAGCTATTTTCCAATTATTTTTTTCAAACATTTCT-TTTGTTATATA 21906 Query 203524 agtatgtttaataataggtataaattCAGTTAAATATTCTGATAATTTATAATTTATTTT 203583 | |||||| |||| |||| |||||| |||||| |||| || ||| ||||||||| Sbjct 21905 TGGATGTTTTATAACAGGTGGAAATTCTGTTAAAAATTCATCTAGTTTTGTATTTATTTT 21846 Query 203584 ATTTCTAATGGTTTTTGCAGAATATTCTAATTTATTACTA-GCAATCCAACATGGTACAA 203642 |||||| || ||||| |||||| ||||| ||| | | | ||| |||||| || |||| Sbjct 21845 ATTTCTGATTGTTTTAGCAGAAAATTCTTGTTT-TGATGATGCATACCAACAAGGCACAA 21787 Query 203643 TATTATGTGAATCAAC 203658 ||||||| | ||| || Sbjct 21786 TATTATGAGCATCTAC 21771 Score = 174 bits (192), Expect = 2e-38 Identities = 183/243 (75%), Gaps = 2/243 (1%) Strand=Plus/Minus Query 202868 CCAACATATCCATTTGGATCACGTCCATCTATAAAATATTTATCATTTAAATNNNNNNNN 202927 || ||||| ||||| ||||||| ||||||||| |||||||| |||||||| Sbjct 22629 CCTACATAACCATTAGGATCACAACCATCTATACTATATTTATTATTTAAATAATTGGCC 22570 Query 202928 NNNNNNAATGCTTCTTCTGGTGATTTTGTCCATTCTAATAtttttttAGCCCAATACATT 202987 || || ||| || | || ||||||||||||||||| || |||||||||||| Sbjct 22569 CATTTTAAAGCAATTTCAGGAGTTTCAGTCCATTCTAATATTTTCTTTGCCCAATACATT 22510 Query 202988 CTTAAATATCCATGCAT-TTTACCATAGATAATCATTTGTTTTTGTGATGCATTCCATAA 203046 |||||| |||||||||| ||| | || | | | |||||| ||||| |||||||||| || Sbjct 22509 CTTAAAAATCCATGCATCTTTCCTATTG-TTACCATTTGATTTTGACATGCATTCCACAA 22451 Query 203047 ATTGTCATGAGTTAATGCATTTTCAAGTTGATATAAACTATATATATGTTTTCTAGTATC 203106 || ||||||||| || |||||| | |||| |||| |||||||| |||||| |||| Sbjct 22450 ATCATCATGAGTTTCTGAATTTTCCAAATGATTTAAAAAATATATATATTTTCTTTTATC 22391 Query 203107 ATT 203109 || Sbjct 22390 CTT 22388 Score = 132 bits (146), Expect = 7e-26 Identities = 199/274 (73%), Gaps = 9/274 (3%) Strand=Plus/Minus Query 203714 ATTTTAATAGGATAAAAATCAACAATCAATA-CACCAATATTATAtttttttATAAATTT 203772 |||||||| ||||||||||| ||| |||| | || |||||||| ||||||||||||| Sbjct 21641 ATTTTAAT-GGATAAAAATCTGTAAT-AATAGCTCCTATATTATACATTTTTATAAATTT 21584 Query 203773 TGGTAATACATCTACTGATATTCCTATC-AATAGATGAAAATGTATATTTAAATTTTTAC 203831 | |||| | || | | | || || |||||||||| ||||||||| ||||||| Sbjct 21583 AAG-AATATTTATATTTGGTTCACCATGTAAAAGATGAAAATTTATATTTAATTTTTTAC 21525 Query 203832 ATTCTTCTTCCATTTGTTTAACACCATTCAACATAAAATCAAATTGTCTAATTGTAGCAT 203891 |||||| ||| |||| || | || |||| | ||| | | | | ||| || | ||||| Sbjct 21524 ATTCTTTTTCGATTTCTTCTAATCCTTTCAGAAGAAATTTATAATATCTTATAGAAGCAT 21465 Query 203892 TAAGAAATTCTGGTACTAAACATATACACATATGTAATG--ACGATTTTGATTTTAATGC 203949 ||||||| | || | || || | ||| ||||| | || || | || |||||| || Sbjct 21464 TAAGAAAGTTTGACATTATGCAAAAACATATATGAAGTGGTACATTATT--TTTTAAAGC 21407 Query 203950 TAATTCTTGTGCATAAATTAAACCCCAATTATCT 203983 || || ||| ||| ||| ||| ||||||||||| Sbjct 21406 TATTTTTTGAGCAAAAAGTAATGCCCAATTATCT 21373 Score = 109 bits (120), Expect = 8e-19 Identities = 102/130 (78%), Gaps = 0/130 (0%) Strand=Plus/Minus Query 202740 ATTTTTTAATAAATAAATCAACATCAAATTTACGTCTACATCCTTCATAACTCATATATC 202799 |||| ||| |||| | ||| | |||||| ||| |||| ||||||||| ||||||||| Sbjct 22881 ATTTCATAACAAATTCAGCAATGTTAAATTTTCGTTTACAACCTTCATAATTCATATATC 22822 Query 202800 TAATTTTACCAAATATTGGTCTTTCTTTCCATGCTCTATCATGAATACCACAAATTGACC 202859 ||||||| |||||||| ||||||| ||| | |||||| | ||||||||| |||| Sbjct 22821 TAATTTTTCCAAATATATCTCTTTCTGGCCAACCATGATCATGGACACCACAAATAGACC 22762 Query 202860 ACATACATCC 202869 ||||||| || Sbjct 22761 ACATACAACC 22752 >seq1766 Length=1490156 Score = 178 bits (196), Expect = 2e-39 Identities = 182/238 (76%), Gaps = 0/238 (0%) Strand=Plus/Plus Query 124539 ATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAAT 124598 ||||| || ||| | || ||| | ||||| ||||| |||||| | ||| |||| || Sbjct 1262814 ATGCAGATCTTTGTCAAAACATTGACAGGTAAAACAATAACTCTGGAGGTTGAGGCCTCA 1262873 Query 124599 GATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCAA 124658 ||||| ||| ||| ||||| |||||||||||| || ||||| || ||||| ||||| Sbjct 1262874 GATACCATTGAAAATGTAAAAGCGAAAATTCAAGACAAGGAAGGAATTCCACCAGATCAG 1262933 Query 124659 CAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAAT 124718 ||||| | || ||||| || |||||| |||| ||| | || |||||| ||||||||| Sbjct 1262934 CAAAGATTGATCTTTGCTGGTAAACAACTAGAAGATGGACGTACATTATCTGATTATAAT 1262993 Query 124719 ATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGTATTAAAAATT 124776 ||||||||||| ||||| || ||||| || | |||||| ||||||| || ||| || Sbjct 1262994 ATTCAAAAAGAGTCAACATTACATTTAGTACTGCGTTTAAGAGGTGGAATGCAAATTT 1263051 Score = 178 bits (196), Expect = 2e-39 Identities = 182/238 (76%), Gaps = 0/238 (0%) Strand=Plus/Plus Query 124539 ATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAAT 124598 |||||||| || | || || || || || |||||||| ||| | || ||||||| | Sbjct 1263270 ATGCAAATTTTCGTCAAAACTCTTACGGGAAAAACTATTACTCTTGAAGTTGAAGCTTCT 1263329 Query 124599 GATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCAA 124658 ||||| ||| ||| ||||| ||||||||||| ||||||||||| |||||||||||| Sbjct 1263330 GATACCATTGAAAATGTAAAAGCAAAAATTCAAGACAAAGAAGGTATTCCACCTGATCAA 1263389 Query 124659 CAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAAT 124718 || || || || ||||| || ||||| |||| ||| |||| || | ||||| ||| Sbjct 1263390 CAGAGACTGATCTTTGCCGGTAAACAGCTAGAAGATGGTCGTACTCTTTCCGATTACAAT 1263449 Query 124719 ATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGTATTAAAAATT 124776 ||||||||||||||||| | ||| | ||| ||||| | ||||||||||| ||| || Sbjct 1263450 ATTCAAAAAGAATCAACCCTCCATCTTGTTCTACGTCTTCGAGGTGGTATGCAAATTT 1263507 Score = 165 bits (182), Expect = 1e-35 Identities = 180/239 (75%), Gaps = 0/239 (0%) Strand=Plus/Plus Query 124538 AATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAA 124597 ||||||||| || | || || || ||||| || ||||| ||| |||| ||||||| Sbjct 1263953 AATGCAAATTTTCGTCAAAACTCTTACAGGAAAGACTATTACTTTAGAAGTTGAAGCTTC 1264012 Query 124598 TGATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCA 124657 ||||| ||| ||| | ||| ||||||||||| ||||||||||| || ||||| || Sbjct 1264013 CGATACTATTGAAAATGTGAAAGCTAAAATTCAAGACAAAGAAGGTATTCCTCCTGACCA 1264072 Query 124658 ACAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAA 124717 ||| || | || ||||| |||||||||||||| ||| |||| || | ||||| || Sbjct 1264073 ACAGAGATTGATCTTTGCTGGAAAACAATTAGAAGATGGTCGTACTCTTTCCGATTACAA 1264132 Query 124718 TATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGTATTAAAAATT 124776 |||||||||||||||||| | ||| | ||||| || | || |||||||| ||| || Sbjct 1264133 TATTCAAAAAGAATCAACCCTCCATCTTGTTTTGCGACTTCGTGGTGGTATGCAAATTT 1264191 Score = 161 bits (178), Expect = 1e-34 Identities = 179/239 (75%), Gaps = 0/239 (0%) Strand=Plus/Plus Query 124538 AATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAA 124597 ||||||||| ||| | || ||||| || || |||||||| ||| |||| ||||||| Sbjct 1263041 AATGCAAATTTTTGTCAAAACACTCACTGGAAAAACTATTACTTTAGAAGTTGAAGCTTC 1263100 Query 124598 TGATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCA 124657 ||||| ||| ||| | ||| |||||||| |||||||||||||| || |||||||| Sbjct 1263101 AGATACCATTGAAAATGTTAAAGCTAAAATTCAGGATAAAGAAGGTATTCCTCCTGATCA 1263160 Query 124658 ACAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAA 124717 ||| || | || ||||| || ||||| || || ||| | || || | ||||| || Sbjct 1263161 ACAGAGATTGATCTTTGCCGGTAAACAGTTGGAAGATGGCCGTACTCTTTCCGATTACAA 1263220 Query 124718 TATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGTATTAAAAATT 124776 ||||||||||||||| || | ||| | |||||||| | || |||||||| ||| || Sbjct 1263221 TATTCAAAAAGAATCTACACTTCATCTTGTTTTACGACTTCGTGGTGGTATGCAAATTT 1263279 Score = 159 bits (176), Expect = 5e-34 Identities = 181/240 (75%), Gaps = 2/240 (1%) Strand=Plus/Plus Query 124538 AATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAA 124597 ||||||||| || | ||||| || || || ||||| || ||| | ||| |||||||| Sbjct 1263725 AATGCAAATTTTCGTTAAGACTCTTACGGGAAAAACCATCACTTTGGAGGTTGAAGCATC 1263784 Query 124598 TGATACAATTTCTAAT-TTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATC 124656 |||||| ||| ||| ||||||| ||||| |||||||| || ||||| || || |||| Sbjct 1263785 TGATACTATTGAAAATGTTAAAACT-AAAATCCAAGATAAGGAGGGTATTCCCCCAGATC 1263843 Query 124657 AACAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATA 124716 | ||||| | |||||||| || ||||| | || ||| |||| ||| | ||||||| Sbjct 1263844 AGCAAAGATTGATTTTTGCTGGTAAACAGCTGGAAGATGGTCGTACACTTTCGGATTATA 1263903 Query 124717 ATATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGTATTAAAAATT 124776 ||||||||||||| || || | ||||| || || ||||| ||||||| || ||| || Sbjct 1263904 ATATTCAAAAAGAGTCGACACTACATTTAGTATTGCGTTTGAGAGGTGGAATGCAAATTT 1263963 Score = 159 bits (176), Expect = 5e-34 Identities = 172/228 (75%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 124539 ATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAAT 124598 |||||||| || | || || || || || |||||||| ||| | || ||||||| | Sbjct 1264182 ATGCAAATTTTCGTTAAAACTCTTACCGGAAAAACTATTACTCTTGAAGTTGAAGCTTCT 1264241 Query 124599 GATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCAA 124658 ||||| ||| ||| ||||| ||||||||||| ||||||||||| || ||||||||| Sbjct 1264242 GATACCATTGAAAATGTAAAAGCAAAAATTCAAGACAAAGAAGGTATTCCTCCTGATCAA 1264301 Query 124659 CAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAAT 124718 || || | || ||||| ||||||||||| || ||| | || ||| | ||||| ||| Sbjct 1264302 CAGAGATTGATCTTTGCTGGAAAACAATTGGAAGATGGACGTACACTTTCCGATTACAAT 1264361 Query 124719 ATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGT 124766 |||||||||||||| ||| | || | || | ||| | ||||||||| Sbjct 1264362 ATTCAAAAAGAATCGACTCTTCACCTTGTACTTCGTCTCCGAGGTGGT 1264409 Score = 158 bits (174), Expect = 2e-33 Identities = 180/239 (75%), Gaps = 2/239 (1%) Strand=Plus/Plus Query 124539 ATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAAT 124598 |||||||| || | ||||| || || || ||||| || || | ||| |||||||| | Sbjct 1263498 ATGCAAATTTTCGTTAAGACTCTTACGGGAAAAACCATTACATTGGAGGTTGAAGCATCT 1263557 Query 124599 GATACAATTTCTAAT-TTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCA 124657 ||||| ||| ||| ||||||| ||||| |||||||| || ||||| || || ||||| Sbjct 1263558 GATACTATTGAAAATGTTAAAACT-AAAATCCAAGATAAGGAGGGTATTCCTCCAGATCA 1263616 Query 124658 ACAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAA 124717 ||||| | |||||||| || ||||| | || ||| |||| || | |||||||| Sbjct 1263617 GCAAAGATTGATTTTTGCTGGTAAACAGCTGGAAGATGGTCGTACTCTTTCCGATTATAA 1263676 Query 124718 TATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGTATTAAAAATT 124776 |||||||||||||||||| | ||||| || || ||||| ||||||| || ||| || Sbjct 1263677 TATTCAAAAAGAATCAACACTACATTTAGTATTGCGTTTGAGAGGTGGAATGCAAATTT 1263735 >seq3 Length=676877 Score = 159 bits (176), Expect = 5e-34 Identities = 194/263 (74%), Gaps = 5/263 (2%) Strand=Plus/Plus Query 205435 TTTAAATTAGTTAAATGTGCAATCATATAAGTCAATAAACTATAACTAGCAACATTAAAT 205494 || || || || | |||||| | |||||| | || ||| |||| |||| ||||||| Sbjct 624249 TTCAAGTTTGTAATATGTGCCAGTATATAAATTAACAAAGAATAAGATGCAATATTAAAT 624308 Query 205495 GGTACACCTAAACCCATATCAGCTGATCTTTGATACATTTGACATGTAAGATATTTATT- 205553 |||||||| | ||||||||| || ||||||||| | ||| |||| ||| || || Sbjct 624309 GGTACACCAAGACCCATATCCGCACTTCTTTGATAAAGTTGGCATG----ATAATTCTTC 624364 Query 205554 ATTAATTACATGAAATTGTACAAAACAATGACAAGGTGGTATAACCATATTTTCAACATC 205613 ||| |||||| |||||| || |||||||||||||| |||| | |||| ||| || ||| Sbjct 624365 ATTGCTTACATAAAATTGAACGAAACAATGACAAGGAGGTAAAGCCATTTTTGGAATATC 624424 Query 205614 TATAGGATTCCAGGCTGTTAATATTATATTTCTAGATTCAGGtttattttttattttatt 205673 || |||||||| ||||| | ||| || ||||| | || || | |||||||| Sbjct 624425 AATTGGATTCCATGCTGTCATTATAATTCTTCTATCATTGGGAGAATATCGTATTTTATC 624484 Query 205674 tatAATATGTGTTAATTGATCAA 205696 ||||| | | |||||||||||| Sbjct 624485 TATAACTTCTTTTAATTGATCAA 624507 Score = 145 bits (160), Expect = 1e-29 Identities = 199/273 (73%), Gaps = 5/273 (2%) Strand=Plus/Plus Query 205709 TATAATTTGTATCCATATCAATATATTTAGCACCAAAATGACGCCATTGAAAACCATAAA 205768 |||||| | | | |||||| ||||| | ||||||||||| | ||||||||| ||||||| Sbjct 624602 TATAATCTTTGTACATATCTTTATATGTTGCACCAAAATGTCTCCATTGAAATCCATAAA 624661 Query 205769 CTGGACCTAAATCACCTTCTTTTCTATCATTAAAACCACGtttttttatatattttaatg 205828 ||||||||||| ||||||| ||||| ||||||||| | || | | | | Sbjct 624662 TAGGACCTAAATCTCCTTCTTCCCTATCTATAAAACCACAAGAATCTAAAAACTCACGCG 624721 Query 205829 atccattttcatcccaaatatgga-ttcctttattttttaGAATATTTGTATTAGTTGAT 205887 | | ||| ||||||||||||| | |||||| | ||| | |||| ||| || ||| Sbjct 624722 AACTATTCGCATCCCAAATATGAACATCCTTT-TCGCTTAATTTCTTTGCATTTGTGGAT 624780 Query 205888 CCAGATATAAACCATAATAATTCTTCAACAATTCCTCTCCAAAACATTGATTTTGTTGTA 205947 || ||||||||||| ||||| || || | ||| ||||||| | |||||| || Sbjct 624781 CCTTTAATAAACCATAACAATTCCTCCACTACACCTTTCCAAAATACACGTTTTGTAGTT 624840 Query 205948 AATAATGGAAATGAATCATCTAAT--TTATATT 205978 |||||||||||| ||| | |||| ||||||| Sbjct 624841 AATAATGGAAATATATC-TATAATAATTATATT 624872 >seq2021 Length=1035722 Score = 145 bits (160), Expect = 1e-29 Identities = 148/193 (77%), Gaps = 0/193 (0%) Strand=Plus/Minus Query 124536 ACAATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCA 124595 || ||||| |||||| | || || | || || |||||||| ||| | || | |||||| Sbjct 239395 ACGATGCAGATATTTGTGAAAACTTTGACGGGTAAAACTATCACTCTTGAAGTAGAAGCA 239336 Query 124596 AATGATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGAT 124655 ||||| || ||| | ||| |||||||| ||||||||||| |||||||||||| Sbjct 239335 TCAGATACTATAGAAAATGTGAAAGCTAAAATTCAGGATAAAGAAGGAATACCACCTGAT 239276 Query 124656 CAACAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTAT 124715 || ||| | ||||||||||| ||||| |||||||| ||| | || || ||| || ||| Sbjct 239275 CAGCAACGTCTTATTTTTGCTGGAAAGCAATTAGAAGATGGACGTACTTTATCGGACTAT 239216 Query 124716 AATATTCAAAAAG 124728 ||||||||||||| Sbjct 239215 AATATTCAAAAAG 239203 >seq2209 Length=4115427 Score = 143 bits (158), Expect = 4e-29 Identities = 175/239 (73%), Gaps = 0/239 (0%) Strand=Plus/Minus Query 124538 AATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAA 124597 |||||| || ||| | ||||| ||||||| ||||| || || |||| ||||||| Sbjct 648883 AATGCAGATCTTTGTTAAGACTTTAACAGGAAAAACCATCACCTTAGAAGTTGAAGCTTC 648824 Query 124598 TGATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCA 124657 || ||||| ||| ||||| || |||||||||||||| || || ||||| ||||| Sbjct 648823 AGACACAATAGAGAATGTAAAAGCTAAGATTCAAGATAAAGAGGGAATTCCACCAGATCA 648764 Query 124658 ACAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAA 124717 |||| | | |||||||| || |||||| | || ||| || ||||| | ||||||||| Sbjct 648763 ACAACGTTTGATTTTTGCTGGCAAACAACTTGAAGATGGTAGAACACTCTCAGATTATAA 648704 Query 124718 TATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGTATTAAAAATT 124776 |||||| ||||| || ||| | ||| | || || | | ||||| || || ||| || Sbjct 648703 TATTCAGAAAGAGTCTACTCTTCATCTAGTATTGAGACTTCGAGGAGGAATGCAAATTT 648645 Score = 138 bits (152), Expect = 2e-27 Identities = 174/239 (73%), Gaps = 0/239 (0%) Strand=Plus/Minus Query 124538 AATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAA 124597 ||||||||| ||| | || || || || || ||||| || ||| | || ||||||| Sbjct 664076 AATGCAAATCTTTGTCAAAACTCTCACTGGAAAAACCATCACTCTTGAAGTTGAAGCTTC 664017 Query 124598 TGATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCA 124657 ||||| || ||| |||| || ||||||||||||||||| || ||||| ||||| Sbjct 664016 AGATACTATAGAGAATGTAAAGGCTAAGATTCAAGATAAAGAAGGAATTCCACCAGATCA 663957 Query 124658 ACAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAA 124717 |||| | | |||||||| || |||||| | || ||| || ||||| | ||||||||| Sbjct 663956 ACAACGATTGATTTTTGCTGGCAAACAACTTGAAGATGGTAGAACACTCTCAGATTATAA 663897 Query 124718 TATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGTATTAAAAATT 124776 ||| ||||| ||||| || | ||||| || || | | |||| ||||| ||| || Sbjct 663896 TATCCAAAAGGAATCTACACTCCATTTAGTGTTGAGACTTAGAGGAGGTATGCAAATTT 663838 Score = 138 bits (152), Expect = 2e-27 Identities = 169/231 (73%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 124538 AATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAA 124597 ||||||||| ||| | || || || || || ||||| || ||| | || ||||||| Sbjct 664304 AATGCAAATCTTTGTCAAAACTCTCACTGGAAAAACCATCACTCTTGAAGTTGAAGCTTC 664245 Query 124598 TGATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCA 124657 ||||| || ||| |||| || ||||||||||||||||| || || || ||||| Sbjct 664244 AGATACTATAGAGAATGTAAAGGCTAAGATTCAAGATAAAGAAGGAATTCCTCCCGATCA 664185 Query 124658 ACAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAA 124717 ||| | | || ||||| ||||||||| | || ||| | ||||| | |||||| || Sbjct 664184 GCAACGATTGATCTTTGCTGGAAAACAACTTGAAGATGGAAGAACACTCTCAGATTACAA 664125 Query 124718 TATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGTAT 124768 ||||||||||||||| ||| | ||| |||| || | | |||||||| || Sbjct 664124 TATTCAAAAAGAATCTACTCTTCATCTGGTATTGAGACTTCGAGGTGGAAT 664074 Score = 132 bits (146), Expect = 7e-26 Identities = 157/213 (74%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 124538 AATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAA 124597 ||||||||| ||| | || || || || || || ||||| || | || ||||||| Sbjct 663620 AATGCAAATTTTTGTCAAAACTCTTACTGGAAAGACTATTACACTTGAAGTTGAAGCTTC 663561 Query 124598 TGATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCA 124657 |||||||| || |||| || ||||||||||||||||| || || |||||||| Sbjct 663560 GGATACAATAGAAAACGTAAAGGCTAAGATTCAAGATAAAGAAGGAATTCCTCCTGATCA 663501 Query 124658 ACAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAA 124717 ||| | | |||||||| ||||||||| | || ||| | | ||| | |||||| || Sbjct 663500 GCAACGATTGATTTTTGCTGGAAAACAACTTGAAGATGGAAGGACACTCTTAGATTACAA 663441 Query 124718 TATTCAAAAAGAATCAACTTTGCATTTGGTTTT 124750 |||||| |||||||| || ||||| ||||| || Sbjct 663440 TATTCAGAAAGAATCTACATTGCACTTGGTATT 663408 Score = 132 bits (146), Expect = 7e-26 Identities = 172/238 (72%), Gaps = 0/238 (0%) Strand=Plus/Minus Query 124539 ATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAAT 124598 |||||||| ||| | || || || || ||||| || || || |||| ||||||| Sbjct 663847 ATGCAAATTTTTGTCAAAACTCTCACTGGCAAGACCATTACCTTAGAAGTTGAAGCTTCA 663788 Query 124599 GATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCAA 124658 |||||||| ||| | ||| || ||||||||||||||||| || || |||||||| Sbjct 663787 GATACAATAGAGAATGTTAAAGCTAAGATTCAAGATAAAGAAGGAATTCCTCCTGATCAG 663728 Query 124659 CAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAAT 124718 ||| | | || ||||| || |||||| | || ||| || ||||| | |||||||||| Sbjct 663727 CAACGATTGATCTTTGCTGGCAAACAACTTGAAGATGGTAGAACACTCTCAGATTATAAT 663668 Query 124719 ATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGTATTAAAAATT 124776 ||||| ||||| || ||| | ||| | || || | | ||||| || || ||| || Sbjct 663667 ATTCAGAAAGAGTCTACTCTTCATCTAGTATTGAGACTTCGAGGAGGAATGCAAATTT 663610 Score = 122 bits (134), Expect = 1e-22 Identities = 165/230 (72%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 124539 ATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAAT 124598 |||||||| ||| | || || || || ||||| || || || |||| ||||||| Sbjct 648426 ATGCAAATCTTTGTCAAAACTCTCACTGGCAAGACCATTACCTTAGAAGTTGAAGCTTCA 648367 Query 124599 GATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCAA 124658 || ||||| ||| | ||| || ||||||||||||||||| || || || |||||| Sbjct 648366 GACACAATAGAAAATGTTAAAGCTAAGATTCAAGATAAAGAAGGAATTCCTCCAGATCAA 648307 Query 124659 CAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAAT 124718 ||| | | || ||||| || |||||| |||| ||| | |||| | |||||||||| Sbjct 648306 CAACGTTTAATCTTTGCTGGTAAACAACTAGAAGATGGAAGAACTCTTTCAGATTATAAT 648247 Query 124719 ATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGTAT 124768 ||||| |||||||| || | || || || || | | ||||| || || Sbjct 648246 ATTCAGAAAGAATCTACACTTCACTTAGTGTTGAGACTTCGAGGGGGAAT 648197 Score = 114 bits (126), Expect = 2e-20 Identities = 164/231 (71%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 124538 AATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAA 124597 ||||||||| ||| | || || || || || |||||||| || | || ||||||| Sbjct 648655 AATGCAAATTTTTGTCAAAACTCTTACTGGGAAAACTATCACACTTGAAGTTGAAGCTTC 648596 Query 124598 TGATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCA 124657 || ||||| ||| |||| || ||||| || |||||||| || || ||||| || Sbjct 648595 AGACACAATAGAAAATGTAAAGGCTAAGATTCAGGACAAAGAAGGAATTCCTCCTGACCA 648536 Query 124658 ACAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAA 124717 ||| | | |||||||| || ||||| |||| ||| | |||| | ||||||||| Sbjct 648535 GCAACGTTTGATTTTTGCTGGTAAACAGCTAGAAGATGGAAGAACTCTCTCAGATTATAA 648476 Query 124718 TATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGTAT 124768 ||||||||| ||||| || | ||||| || || | | |||| ||||| Sbjct 648475 TATTCAAAAGGAATCTACACTCCATTTAGTATTGAGACTTAGAGGAGGTAT 648425 >seq2420 Length=677074 Score = 113 bits (124), Expect = 7e-20 Identities = 106/135 (79%), Gaps = 0/135 (0%) Strand=Plus/Plus Query 124640 AGGTATACCACCTGATCAACAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCG 124699 ||| || ||||||| ||||||||| | || ||||| ||||||||||| || ||| || | Sbjct 459102 AGGAATTCCACCTGGTCAACAAAGATTAATCTTTGCTGGAAAACAATTGGAAGATGGTAG 459161 Query 124700 AACATTAGAAGATTATAATATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACG 124759 ||| | ||||||||||||||| || ||||| || || |||||||| |||||||| | Sbjct 459162 GACACTTTCAGATTATAATATTCAGAAGGAATCTACATTACATTTGGTGCTACGTTTAAG 459221 Query 124760 AGGTGGTATTAAAAA 124774 |||||| ||||| Sbjct 459222 GGGTGGTGCAAAAAA 459236 Score = 91.5 bits (100), Expect = 2e-13 Identities = 86/107 (80%), Gaps = 2/107 (2%) Strand=Plus/Plus Query 124539 ATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAAT 124598 ||||| |||||| | ||||| ||||| ||||| ||||| ||| | || |||||||| Sbjct 458943 ATGCAGATATTTGTGAAGACTCTAACTGGCAAGACTATTACTCTTGAAGTTGAAGCATCA 459002 Query 124599 GATACAATTTCTAAT-TTAAAACAGAAAATTCAAGATAAAGAAGGTA 124644 ||||| ||| ||| ||||| || |||||||||||||||||||||| Sbjct 459003 GATACCATTGAAAATGTTAAAGCA-AAAATTCAAGATAAAGAAGGTA 459048 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 755433043580800