Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Apis_20cerana_20[refseq_20GCF_5F001442555.1_202015-11-12] 2,431 sequences; 228,331,812 total letters Query= NC_004690.1 Length=113220 Score E Sequences producing significant alignments: (Bits) Value seq1766 152 4e-32 seq2209 149 5e-31 seq2021 98.7 7e-16 >seq1766 Length=1490156 Score = 152 bits (168), Expect = 4e-32 Identities = 163/213 (77%), Gaps = 2/213 (1%) Strand=Plus/Minus Query 15152 AAAACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTTAGAATTCTCGCGTCT 15211 ||||| | ||| ||||| || |||||||| || ||||||||| ||| | | | ||| Sbjct 1264165 AAAACAAGATGGAGGGTTGATTCTTTTTGAATATTGTAATCGGAAAGAGTACGACCATCT 1264106 Query 15212 TCTAATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGAATTCCTTCTTTGTCA 15271 ||||||||||| ||||| | ||||| | |||||||| ||||| ||||||||||| Sbjct 1264105 TCTAATTGTTTTCCAGCAAAGATCAATCTCTGTTGGTCAGGAGGAATACCTTCTTTGTCT 1264046 Query 15272 CAAATTTT-GCTCTTTACAATTTCTATGGTATCGCTATTTTCTACATCTAAGGTAATGGT 15330 |||||| ||| || ||| |||| || |||||| | ||| || ||||| ||||| || Sbjct 1264045 TGAATTTTAGCT-TTCACATTTTCAATAGTATCGGAAGCTTCAACTTCTAAAGTAATAGT 1263987 Query 15331 TTTACCTGTCAGAGTTTTTACAAAAATTTGCAT 15363 || ||||| |||||||| || ||||||||||| Sbjct 1263986 CTTTCCTGTAAGAGTTTTGACGAAAATTTGCAT 1263954 Score = 134 bits (148), Expect = 1e-26 Identities = 168/228 (74%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 15137 CCACCTCTCAATCTTAAAACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTT 15196 ||||| | | || |||||| | |||||| || || |||||||| || ||||||||| Sbjct 1263268 CCACCACGAAGTCGTAAAACAAGATGAAGTGTAGATTCTTTTTGAATATTGTAATCGGAA 1263209 Query 15197 AGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGA 15256 ||| | | | ||||| || ||||| || || | ||||| | ||||| || ||| Sbjct 1263208 AGAGTACGGCCATCTTCCAACTGTTTACCGGCAAAGATCAATCTCTGTTGATCAGGAGGA 1263149 Query 15257 ATTCCTTCTTTGTCACAAATTTT-GCTCTTTACAATTTCTATGGTATCGCTATTTTCTAC 15315 || |||||||| || |||||| ||| || ||| |||| |||||||| | ||| || Sbjct 1263148 ATACCTTCTTTATCCTGAATTTTAGCT-TTAACATTTTCAATGGTATCTGAAGCTTCAAC 1263090 Query 15316 ATCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCAT 15363 ||||| ||||| ||||| || || || ||||| |||||||||||||| Sbjct 1263089 TTCTAAAGTAATAGTTTTTCCAGTGAGTGTTTTGACAAAAATTTGCAT 1263042 Score = 131 bits (144), Expect = 1e-25 Identities = 168/229 (73%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 15137 CCACCTCTCAATCTTAAAACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTT 15196 ||||||| | | || ||| | ||| ||||| || |||||||| || ||||||||| Sbjct 1263496 CCACCTCGAAGACGTAGAACAAGATGGAGGGTTGATTCTTTTTGAATATTGTAATCGGAA 1263437 Query 15197 AGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGA 15256 ||| | | | ||||||| ||||| || || | |||| | ||||| || |||| Sbjct 1263436 AGAGTACGACCATCTTCTAGCTGTTTACCGGCAAAGATCAGTCTCTGTTGATCAGGTGGA 1263377 Query 15257 ATTCCTTCTTTGTCACAAATTTT-GCTCTTTACAATTTCTATGGTATCGCTATTTTCTAC 15315 || ||||||||||| |||||| ||| |||||| |||| |||||||| | ||| || Sbjct 1263376 ATACCTTCTTTGTCTTGAATTTTTGCT-TTTACATTTTCAATGGTATCAGAAGCTTCAAC 1263318 Query 15316 ATCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCATA 15364 || | ||||| ||||| || || |||||||| || |||||||||||| Sbjct 1263317 TTCAAGAGTAATAGTTTTTCCCGTAAGAGTTTTGACGAAAATTTGCATA 1263269 Score = 129 bits (142), Expect = 4e-25 Identities = 153/205 (75%), Gaps = 2/205 (1%) Strand=Plus/Minus Query 15161 TGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTTAGAATTCTCGCGTCTTCTAATTGT 15220 ||||| || || |||||||| || ||||||||| || | | | ||||| |||||| Sbjct 1264384 TGAAGAGTCGATTCTTTTTGAATATTGTAATCGGAAAGTGTACGTCCATCTTCCAATTGT 1264325 Query 15221 TTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGAATTCCTTCTTTGTCACAAATTTT- 15279 || ||||| | ||||| | ||||| || ||||| ||||||||||| |||||| Sbjct 1264324 TTTCCAGCAAAGATCAATCTCTGTTGATCAGGAGGAATACCTTCTTTGTCTTGAATTTTT 1264265 Query 15280 GCTCTTTACAATTTCTATGGTATCGCTATTTTCTACATCTAAGGTAATGGTTTTACCTGT 15339 ||| |||||| |||| |||||||| | ||| || || | ||||| ||||| || || Sbjct 1264264 GCT-TTTACATTTTCAATGGTATCAGAAGCTTCAACTTCAAGAGTAATAGTTTTTCCGGT 1264206 Query 15340 CAGAGTTTTTACAAAAATTTGCATA 15364 |||||||| || |||||||||||| Sbjct 1264205 AAGAGTTTTAACGAAAATTTGCATA 1264181 Score = 120 bits (132), Expect = 2e-22 Identities = 184/257 (72%), Gaps = 9/257 (4%) Strand=Plus/Minus Query 15137 CCACCTCTCAATCTTAAAACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTT 15196 |||||||| || | | |||||||| | || || |||||||| || || ||||| | Sbjct 1263040 CCACCTCTTAAACGCAGTACTAAATGTAATGTTGACTCTTTTTGAATATTATAATCAGAT 1262981 Query 15197 AGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGA 15256 | | | | ||||||| |||||| ||||| | ||||| | ||| || || |||| Sbjct 1262980 AATGTACGTCCATCTTCTAGTTGTTTACCAGCAAAGATCAATCTTTGCTGATCTGGTGGA 1262921 Query 15257 ATTCCTTCTTTGTCACAAATTTT-GCTCTTTACAATTTCTATGGTATCGCTATTTTCTAC 15315 |||||||| ||||| |||||| ||| |||||| |||| |||||||| || || Sbjct 1262920 ATTCCTTCCTTGTCTTGAATTTTCGCT-TTTACATTTTCAATGGTATCTGAGGCCTCAAC 1262862 Query 15316 ATCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCA----TATTTG-AA 15370 || | || || ||||||||||||| ||||| ||||| || |||| ||| || || Sbjct 1262861 CTCCAGAGTTATTGTTTTACCTGTCAATGTTTTGACAAAGATCTGCATGATTATCTGTAA 1262802 Query 15371 AATAAAAT--TTTAATA 15385 || ||||| ||||||| Sbjct 1262801 AAAAAAATTATTTAATA 1262785 Score = 114 bits (126), Expect = 9e-21 Identities = 162/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 15137 CCACCTCTCAATCTTAAAACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTT 15196 ||||||||||| | || |||||||| || || || |||||||| || || |||||| Sbjct 1263724 CCACCTCTCAAACGCAATACTAAATGTAGTGTTGATTCTTTTTGAATATTATAATCGGAA 1263665 Query 15197 AGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGA 15256 ||| | | | ||||| | ||||| ||||| | ||||| | ||| || || ||| Sbjct 1263664 AGAGTACGACCATCTTCCAGCTGTTTACCAGCAAAAATCAATCTTTGCTGATCTGGAGGA 1263605 Query 15257 ATTCCTTCTTTGTCACAAATTTTGCTCTTTACAATTTCTATGGTATCGCTATTTTCTACA 15316 || || || || || ||||| | || ||| |||| || ||||| ||| || Sbjct 1263604 ATACCCTCCTTATCTTGGATTTTAGTTTTAACATTTTCAATAGTATCAGATGCTTCAACC 1263545 Query 15317 TCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCATA 15364 || || ||||||||||| || || ||||| || || |||||||||||| Sbjct 1263544 TCCAATGTAATGGTTTTTCCCGTAAGAGTCTTAACGAAAATTTGCATA 1263497 Score = 98.7 bits (108), Expect = 7e-16 Identities = 158/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 15137 CCACCTCTCAATCTTAAAACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTT 15196 ||||||||||| | || |||||||| || || || |||||||| || || ||||| Sbjct 1263952 CCACCTCTCAAACGCAATACTAAATGTAGTGTCGACTCTTTTTGAATATTATAATCCGAA 1263893 Query 15197 AGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGA 15256 || | | | ||||| | ||||| ||||| | ||||| | ||| || || ||| Sbjct 1263892 AGTGTACGACCATCTTCCAGCTGTTTACCAGCAAAAATCAATCTTTGCTGATCTGGGGGA 1263833 Query 15257 ATTCCTTCTTTGTCACAAATTTTGCTCTTTACAATTTCTATGGTATCGCTATTTTCTACA 15316 || || || || || ||||| | || ||| |||| || ||||| ||| || Sbjct 1263832 ATACCCTCCTTATCTTGGATTTTAGTTTTAACATTTTCAATAGTATCAGATGCTTCAACC 1263773 Query 15317 TCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCAT 15363 || || || |||||||| || || ||||| || || ||||||||||| Sbjct 1263772 TCCAAAGTGATGGTTTTTCCCGTAAGAGTCTTAACGAAAATTTGCAT 1263726 >seq2209 Length=4115427 Score = 149 bits (164), Expect = 5e-31 Identities = 172/229 (75%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 15137 CCACCTCTCAATCTTAAAACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTT 15196 || |||| | ||| || ||||| ||||| || || ||||| || || || ||||| Sbjct 648200 CCCCCTCGAAGTCTCAACACTAAGTGAAGTGTAGATTCTTTCTGAATATTATAATCTGAA 648259 Query 15197 AGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGA 15256 ||| |||| | ||||||| |||||| ||||| | || ||||||||||| || ||| Sbjct 648260 AGAGTTCTTCCATCTTCTAGTTGTTTACCAGCAAAGATTAAACGTTGTTGATCTGGAGGA 648319 Query 15257 ATTCCTTCTTTGTCACAAAT-TTTGCTCTTTACAATTTCTATGGTATCGCTATTTTCTAC 15315 ||||||||||| || ||| || ||| || ||| ||||||| || || | ||| || Sbjct 648320 ATTCCTTCTTTATCTTGAATCTTAGCT-TTAACATTTTCTATTGTGTCTGAAGCTTCAAC 648378 Query 15316 ATCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCATA 15364 |||||||||||||| || || || |||||||| ||||| ||||||||| Sbjct 648379 TTCTAAGGTAATGGTCTTGCCAGTGAGAGTTTTGACAAAGATTTGCATA 648427 Score = 149 bits (164), Expect = 5e-31 Identities = 169/227 (74%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 15137 CCACCTCTCAATCTTAAAACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTT 15196 || ||||| | ||| || |||||||| || || || || ||||| || || ||||| Sbjct 648428 CCTCCTCTAAGTCTCAATACTAAATGGAGTGTAGATTCCTTTTGAATATTATAATCTGAG 648487 Query 15197 AGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGA 15256 ||| |||| | ||||||| ||||| ||||| | ||||||||||| ||||| ||| Sbjct 648488 AGAGTTCTTCCATCTTCTAGCTGTTTACCAGCAAAAATCAAACGTTGCTGGTCAGGAGGA 648547 Query 15257 ATTCCTTCTTTGTCACAAATTTTGCTCTTTACAATTTCTATGGTATCGCTATTTTCTACA 15316 |||||||||||||| ||| || ||||||| ||||||| || || | ||| || Sbjct 648548 ATTCCTTCTTTGTCCTGAATCTTAGCCTTTACATTTTCTATTGTGTCTGAAGCTTCAACT 648607 Query 15317 TCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCAT 15363 || | || || ||||| || || |||||||| |||||||||||||| Sbjct 648608 TCAAGTGTGATAGTTTTCCCAGTAAGAGTTTTGACAAAAATTTGCAT 648654 Score = 145 bits (160), Expect = 6e-30 Identities = 171/229 (75%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 15137 CCACCTCTCAATCTTAAAACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTT 15196 || |||| | ||| || |||| |||||| || || ||||| || || || ||||| Sbjct 663621 CCTCCTCGAAGTCTCAATACTAGATGAAGAGTAGACTCTTTCTGAATATTATAATCTGAG 663680 Query 15197 AGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGA 15256 || |||| | ||||| | |||||||||||| | ||||| ||||| || || ||| Sbjct 663681 AGTGTTCTACCATCTTCAAGTTGTTTGCCAGCAAAGATCAATCGTTGCTGATCAGGAGGA 663740 Query 15257 ATTCCTTCTTTGTCACAAAT-TTTGCTCTTTACAATTTCTATGGTATCGCTATTTTCTAC 15315 ||||||||||| || ||| || ||| || ||| | ||||| ||||| | ||| || Sbjct 663741 ATTCCTTCTTTATCTTGAATCTTAGCT-TTAACATTCTCTATTGTATCTGAAGCTTCAAC 663799 Query 15316 ATCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCATA 15364 |||||||||||||| || || || |||||||| ||||||||||||||| Sbjct 663800 TTCTAAGGTAATGGTCTTGCCAGTGAGAGTTTTGACAAAAATTTGCATA 663848 Score = 143 bits (158), Expect = 2e-29 Identities = 168/227 (74%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 15137 CCACCTCTCAATCTTAAAACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTT 15196 || ||||| | ||| || |||||||| || || || || ||||| || || ||||| Sbjct 663849 CCTCCTCTAAGTCTCAACACTAAATGGAGTGTAGATTCCTTTTGGATATTATAATCTGAG 663908 Query 15197 AGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGA 15256 || |||| | ||||| | |||||||||||| | ||||| |||||||| || |||| Sbjct 663909 AGTGTTCTACCATCTTCAAGTTGTTTGCCAGCAAAAATCAATCGTTGTTGATCTGGTGGA 663968 Query 15257 ATTCCTTCTTTGTCACAAATTTTGCTCTTTACAATTTCTATGGTATCGCTATTTTCTACA 15316 ||||||||||| || ||| || ||||||| | ||||| ||||| | ||| || Sbjct 663969 ATTCCTTCTTTATCTTGAATCTTAGCCTTTACATTCTCTATAGTATCTGAAGCTTCAACT 664028 Query 15317 TCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCAT 15363 || | || |||||||| || || |||||||| ||||| |||||||| Sbjct 664029 TCAAGAGTGATGGTTTTTCCAGTGAGAGTTTTGACAAAGATTTGCAT 664075 Score = 141 bits (156), Expect = 7e-29 Identities = 172/232 (74%), Gaps = 2/232 (1%) Strand=Plus/Plus Query 15137 CCACCTCTCAATCTTAAAACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTT 15196 || |||| | ||| || |||| |||||| || || ||||| || || || ||||| Sbjct 648656 CCTCCTCGAAGTCTCAATACTAGATGAAGAGTAGACTCTTTCTGAATATTATAATCTGAG 648715 Query 15197 AGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGA 15256 || |||| | ||||| | |||||||||||| | |||||||||||||| || |||| Sbjct 648716 AGTGTTCTACCATCTTCAAGTTGTTTGCCAGCAAAAATCAAACGTTGTTGATCTGGTGGA 648775 Query 15257 ATTCCTTCTTTGTCACAAAT-TTTGCTCTTTACAATTTCTATGGTATCGCTATTTTCTAC 15315 ||||| ||||| || ||| || ||| |||||| | ||||| || || | ||| || Sbjct 648776 ATTCCCTCTTTATCTTGAATCTTAGCT-TTTACATTCTCTATTGTGTCTGAAGCTTCAAC 648834 Query 15316 ATCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCATATTT 15367 |||||||| |||||||| ||||| | ||| || ||||| || ||||| ||| Sbjct 648835 TTCTAAGGTGATGGTTTTTCCTGTTAAAGTCTTAACAAAGATCTGCATTTTT 648886 Score = 140 bits (154), Expect = 2e-28 Identities = 167/227 (74%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 15137 CCACCTCTCAATCTTAAAACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTT 15196 ||||||| | ||| || || | |||||| || || |||||||| || |||||||| Sbjct 664077 CCACCTCGAAGTCTCAATACCAGATGAAGAGTAGATTCTTTTTGAATATTGTAATCTGAG 664136 Query 15197 AGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGA 15256 || |||| | ||||| | |||||| ||||| | ||||| ||||| || ||| ||| Sbjct 664137 AGTGTTCTTCCATCTTCAAGTTGTTTTCCAGCAAAGATCAATCGTTGCTGATCGGGAGGA 664196 Query 15257 ATTCCTTCTTTGTCACAAATTTTGCTCTTTACAATTTCTATGGTATCGCTATTTTCTACA 15316 ||||||||||| || ||| || ||||||| | ||||| ||||| | ||| || Sbjct 664197 ATTCCTTCTTTATCTTGAATCTTAGCCTTTACATTCTCTATAGTATCTGAAGCTTCAACT 664256 Query 15317 TCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCAT 15363 || | || |||||||| || || |||||||| ||||| |||||||| Sbjct 664257 TCAAGAGTGATGGTTTTTCCAGTGAGAGTTTTGACAAAGATTTGCAT 664303 Score = 113 bits (124), Expect = 3e-20 Identities = 161/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 15137 CCACCTCTCAATCTTAAAACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTT 15196 || |||| | ||| || || || || | || || ||||| || || |||||||| Sbjct 663393 CCTCCTCGAAGTCTCAATACCAAGTGCAATGTAGATTCTTTCTGAATATTGTAATCTAAG 663452 Query 15197 AGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGA 15256 || | || | ||||| | |||||| ||||| | ||||| ||||| || || ||| Sbjct 663453 AGTGTCCTTCCATCTTCAAGTTGTTTTCCAGCAAAAATCAATCGTTGCTGATCAGGAGGA 663512 Query 15257 ATTCCTTCTTTGTCACAAATTTTGCTCTTTACAATTTCTATGGTATCGCTATTTTCTACA 15316 ||||||||||| || ||| || |||||| ||||||| ||||| | ||| || Sbjct 663513 ATTCCTTCTTTATCTTGAATCTTAGCCTTTACGTTTTCTATTGTATCCGAAGCTTCAACT 663572 Query 15317 TCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCAT 15363 || | ||||| || || || || |||||||| |||||||||||||| Sbjct 663573 TCAAGTGTAATAGTCTTTCCAGTAAGAGTTTTGACAAAAATTTGCAT 663619 >seq2021 Length=1035722 Score = 98.7 bits (108), Expect = 7e-16 Identities = 117/156 (75%), Gaps = 2/156 (1%) Strand=Plus/Plus Query 15209 TCTTCTAATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGAATTCCTTCTTTG 15268 ||||||||||| || ||||| | || | |||||| || || ||| ||||||||||| Sbjct 239238 TCTTCTAATTGCTTTCCAGCAAAAATAAGACGTTGCTGATCAGGTGGTATTCCTTCTTTA 239297 Query 15269 TCACAAATTTT-GCTCTTTACAATTTCTATGGTATCGCTATTTTCTACATCTAAGGTAAT 15327 || |||||| ||| || ||| ||||||| ||||| |||||| || | || || Sbjct 239298 TCCTGAATTTTAGCT-TTCACATTTTCTATAGTATCTGATGCTTCTACTTCAAGAGTGAT 239356 Query 15328 GGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCAT 15363 |||||||| |||| |||||| ||||| || ||||| Sbjct 239357 AGTTTTACCCGTCAAAGTTTTCACAAATATCTGCAT 239392 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 362168469422571