Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Apis_20cerana_20[refseq_20GCF_5F001442555.1_202015-11-12] 2,431 sequences; 228,331,812 total letters Query= NC_005309.1 Length=359853 Score E Sequences producing significant alignments: (Bits) Value seq2209 219 1e-51 seq1766 190 5e-43 seq2021 185 2e-41 seq2420 114 3e-20 seq613 104 5e-17 seq546 98.7 2e-15 seq1112 91.5 3e-13 >seq2209 Length=4115427 Score = 219 bits (242), Expect = 1e-51 Identities = 190/236 (81%), Gaps = 0/236 (0%) Strand=Plus/Plus Query 104324 TTATTTATTCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTA 104383 |||| |||||||||| || || | |||| || | |||||||||||||||||||||| Sbjct 648191 TTATACATTCCCCCTCGAAGTCTCAACACTAAGTGAAGTGTAGATTCTTTCTGAATATTA 648250 Query 104384 TAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGA 104443 || || || |||||||| || |||||||||||||| |||||||| |||| | |||||| Sbjct 648251 TAATCTGAAAGAGTTCTTCCATCTTCTAGTTGTTTACCAGCAAAGATTAAACGTTGTTGA 648310 Query 104444 TCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTA 104503 || ||||| |||||||||||||| |||||||| ||||| |||||||||| || || | Sbjct 648311 TCTGGAGGAATTCCTTCTTTATCTTGAATCTTAGCTTTAACATTTTCTATTGTGTCTGAA 648370 Query 104504 GGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559 | ||| || |||| ||||| ||||| ||||| || ||||| ||||| || ||||| Sbjct 648371 GCTTCAACTTCTAAGGTAATGGTCTTGCCAGTGAGAGTTTTGACAAAGATTTGCAT 648426 Score = 210 bits (232), Expect = 5e-49 Identities = 185/231 (80%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 104330 ATTCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCA 104389 || || ||||| || || | ||||| ||| | ||||||||| || ||||||||||| || Sbjct 648425 ATACCTCCTCTAAGTCTCAATACTAAATGGAGTGTAGATTCCTTTTGAATATTATAATCT 648484 Query 104390 GATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGA 104449 || |||||||| || |||||||| ||||| ||||||||||| | | || || |||||| Sbjct 648485 GAGAGAGTTCTTCCATCTTCTAGCTGTTTACCAGCAAAAATCAAACGTTGCTGGTCAGGA 648544 Query 104450 GGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCT 104509 || ||||||||||| ||||||||||| || ||||||||||||| || || || ||| Sbjct 648545 GGAATTCCTTCTTTGTCCTGAATCTTAGCCTTTACATTTTCTATTGTGTCTGAAGCTTCA 648604 Query 104510 ACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCATT 104560 || || ||||| ||||| || |||||||| ||||| ||||| || |||||| Sbjct 648605 ACTTCAAGTGTGATAGTTTTCCCAGTAAGAGTTTTGACAAAAATTTGCATT 648655 Score = 210 bits (232), Expect = 5e-49 Identities = 184/229 (80%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 104332 TCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGA 104391 ||| |||| || || | ||| | || ||||||||||||||||||||||| || || | Sbjct 663392 TCCTCCTCGAAGTCTCAATACCAAGTGCAATGTAGATTCTTTCTGAATATTGTAATCTAA 663451 Query 104392 TAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGG 104451 || || || || ||||| |||||||||||||||||||| | | || ||||||||||| Sbjct 663452 GAGTGTCCTTCCATCTTCAAGTTGTTTTCCAGCAAAAATCAATCGTTGCTGATCAGGAGG 663511 Query 104452 TATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCTAC 104511 |||||||||||||| |||||||| || ||||| ||||||| ||||| || ||| || Sbjct 663512 AATTCCTTCTTTATCTTGAATCTTAGCCTTTACGTTTTCTATTGTATCCGAAGCTTCAAC 663571 Query 104512 CTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCATT 104560 || |||||||||||||| |||||||| ||||| ||||| || |||||| Sbjct 663572 TTCAAGTGTAATAGTCTTTCCAGTAAGAGTTTTGACAAAAATTTGCATT 663620 Score = 208 bits (230), Expect = 2e-48 Identities = 184/230 (80%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 104330 ATTCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCA 104389 ||||| |||| || || | ||||||||| | ||||| ||||||||||||||||| || Sbjct 663618 ATTCCTCCTCGAAGTCTCAATACTAGATGAAGAGTAGACTCTTTCTGAATATTATAATCT 663677 Query 104390 GATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGA 104449 || || |||||||| ||||| |||||||| |||||||| || | | || ||||||||| Sbjct 663678 GAGAGTGTTCTACCATCTTCAAGTTGTTTGCCAGCAAAGATCAATCGTTGCTGATCAGGA 663737 Query 104450 GGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCT 104509 || |||||||||||||| |||||||| ||||| ||||| |||| ||||| || ||| Sbjct 663738 GGAATTCCTTCTTTATCTTGAATCTTAGCTTTAACATTCTCTATTGTATCTGAAGCTTCA 663797 Query 104510 ACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559 || |||| ||||| ||||| ||||| || ||||| ||||| || ||||| Sbjct 663798 ACTTCTAAGGTAATGGTCTTGCCAGTGAGAGTTTTGACAAAAATTTGCAT 663847 Score = 190 bits (210), Expect = 5e-43 Identities = 182/233 (78%), Gaps = 0/233 (0%) Strand=Plus/Plus Query 104330 ATTCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCA 104389 ||||| |||| || || | ||||||||| | ||||| ||||||||||||||||| || Sbjct 648653 ATTCCTCCTCGAAGTCTCAATACTAGATGAAGAGTAGACTCTTTCTGAATATTATAATCT 648712 Query 104390 GATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGA 104449 || || |||||||| ||||| |||||||| ||||||||||| | | |||||||| || Sbjct 648713 GAGAGTGTTCTACCATCTTCAAGTTGTTTGCCAGCAAAAATCAAACGTTGTTGATCTGGT 648772 Query 104450 GGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCT 104509 || ||||| |||||||| |||||||| ||||||||||| |||| || || || ||| Sbjct 648773 GGAATTCCCTCTTTATCTTGAATCTTAGCTTTTACATTCTCTATTGTGTCTGAAGCTTCA 648832 Query 104510 ACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCATTTT 104562 || |||| || || || || || || | || || ||||| ||||||||||| Sbjct 648833 ACTTCTAAGGTGATGGTTTTTCCTGTTAAAGTCTTAACAAAGATCTGCATTTT 648885 Score = 187 bits (206), Expect = 6e-42 Identities = 180/231 (78%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 104330 ATTCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCA 104389 || || ||||| || || | |||| ||| | ||||||||| || || |||||||| || Sbjct 663846 ATACCTCCTCTAAGTCTCAACACTAAATGGAGTGTAGATTCCTTTTGGATATTATAATCT 663905 Query 104390 GATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGA 104449 || || |||||||| ||||| |||||||| ||||||||||| | | |||||||| || Sbjct 663906 GAGAGTGTTCTACCATCTTCAAGTTGTTTGCCAGCAAAAATCAATCGTTGTTGATCTGGT 663965 Query 104450 GGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCT 104509 || |||||||||||||| |||||||| || |||||||| |||| ||||| || ||| Sbjct 663966 GGAATTCCTTCTTTATCTTGAATCTTAGCCTTTACATTCTCTATAGTATCTGAAGCTTCA 664025 Query 104510 ACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCATT 104560 || || || || || || || ||||| || ||||| ||||| || |||||| Sbjct 664026 ACTTCAAGAGTGATGGTTTTTCCAGTGAGAGTTTTGACAAAGATTTGCATT 664076 Score = 187 bits (206), Expect = 6e-42 Identities = 180/231 (78%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 104330 ATTCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCA 104389 ||||| |||| || || | ||| ||||| | ||||||||||| |||||||| || || Sbjct 664074 ATTCCACCTCGAAGTCTCAATACCAGATGAAGAGTAGATTCTTTTTGAATATTGTAATCT 664133 Query 104390 GATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGA 104449 || || ||||| || ||||| ||||||||||||||||| || | | || ||||| ||| Sbjct 664134 GAGAGTGTTCTTCCATCTTCAAGTTGTTTTCCAGCAAAGATCAATCGTTGCTGATCGGGA 664193 Query 104450 GGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCT 104509 || |||||||||||||| |||||||| || |||||||| |||| ||||| || ||| Sbjct 664194 GGAATTCCTTCTTTATCTTGAATCTTAGCCTTTACATTCTCTATAGTATCTGAAGCTTCA 664253 Query 104510 ACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCATT 104560 || || || || || || || ||||| || ||||| ||||| || |||||| Sbjct 664254 ACTTCAAGAGTGATGGTTTTTCCAGTGAGAGTTTTGACAAAGATTTGCATT 664304 >seq1766 Length=1490156 Score = 190 bits (210), Expect = 5e-43 Identities = 180/230 (78%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 104330 ATTCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCA 104389 ||||| ||||||| | ||||||| ||||||||| || ||||| ||||||||||| ||| Sbjct 1263043 ATTCCACCTCTTAAACGCAGTACTAAATGTAATGTTGACTCTTTTTGAATATTATAATCA 1262984 Query 104390 GATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGA 104449 |||| || | || |||||||||||||| |||||||| || | || || ||||| || Sbjct 1262983 GATAATGTACGTCCATCTTCTAGTTGTTTACCAGCAAAGATCAATCTTTGCTGATCTGGT 1262924 Query 104450 GGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCT 104509 || |||||||| || || ||||| || |||||||||||||| | |||||| | || Sbjct 1262923 GGAATTCCTTCCTTGTCTTGAATTTTCGCTTTTACATTTTCAATGGTATCTGAGGCCTCA 1262864 Query 104510 ACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559 ||||| || || || || ||||| || | |||||| ||||| |||||||| Sbjct 1262863 ACCTCCAGAGTTATTGTTTTACCTGTCAATGTTTTGACAAAGATCTGCAT 1262814 Score = 190 bits (210), Expect = 5e-43 Identities = 168/210 (80%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 104351 ACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCT 104410 || ||||| | |||||||||||| |||||||| || || || ||||| | || ||||| Sbjct 1263250 ACAAGATGAAGTGTAGATTCTTTTTGAATATTGTAATCGGAAAGAGTACGGCCATCTTCC 1263191 Query 104411 AGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGA 104470 | ||||| || ||||| || | ||||||||||||||||| || ||||||||||||||| Sbjct 1263190 AACTGTTTACCGGCAAAGATCAATCTCTGTTGATCAGGAGGAATACCTTCTTTATCCTGA 1263131 Query 104471 ATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTA 104530 || || ||||| |||||||| | |||||| || ||| || |||| |||||||| || Sbjct 1263130 ATTTTAGCTTTAACATTTTCAATGGTATCTGAAGCTTCAACTTCTAAAGTAATAGTTTTT 1263071 Query 104531 CCAGTAAGTGTTTTTACAAATATCTGCATT 104560 ||||| |||||||| ||||| || |||||| Sbjct 1263070 CCAGTGAGTGTTTTGACAAAAATTTGCATT 1263041 Score = 185 bits (204), Expect = 2e-41 Identities = 179/230 (78%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 104330 ATTCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCA 104389 || || |||| || | || || ||||| | || |||||||| |||||||| || || Sbjct 1263499 ATACCACCTCGAAGACGTAGAACAAGATGGAGGGTTGATTCTTTTTGAATATTGTAATCG 1263440 Query 104390 GATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGA 104449 || ||||| | ||| |||||||| ||||| || ||||| || || |||||||||||||| Sbjct 1263439 GAAAGAGTACGACCATCTTCTAGCTGTTTACCGGCAAAGATCAGTCTCTGTTGATCAGGT 1263380 Query 104450 GGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCT 104509 || || |||||||| || ||||| ||||||||||||||||| | |||||| || ||| Sbjct 1263379 GGAATACCTTCTTTGTCTTGAATTTTTGCTTTTACATTTTCAATGGTATCAGAAGCTTCA 1263320 Query 104510 ACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559 || || || |||||||| || || ||||| ||||| || || || ||||| Sbjct 1263319 ACTTCAAGAGTAATAGTTTTTCCCGTAAGAGTTTTGACGAAAATTTGCAT 1263270 Score = 185 bits (204), Expect = 2e-41 Identities = 167/210 (80%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 104351 ACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCT 104410 || ||||| | || |||||||| |||||||| || || || ||||| | ||| |||||| Sbjct 1264162 ACAAGATGGAGGGTTGATTCTTTTTGAATATTGTAATCGGAAAGAGTACGACCATCTTCT 1264103 Query 104411 AGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGA 104470 | ||||||||||||||| || | |||||||| |||||||| || |||||||| || ||| Sbjct 1264102 AATTGTTTTCCAGCAAAGATCAATCTCTGTTGGTCAGGAGGAATACCTTCTTTGTCTTGA 1264043 Query 104471 ATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTA 104530 || || ||||| |||||||| | |||||| || ||| || |||| ||||||||||| Sbjct 1264042 ATTTTAGCTTTCACATTTTCAATAGTATCGGAAGCTTCAACTTCTAAAGTAATAGTCTTT 1263983 Query 104531 CCAGTAAGTGTTTTTACAAATATCTGCATT 104560 || ||||| ||||| || || || |||||| Sbjct 1263982 CCTGTAAGAGTTTTGACGAAAATTTGCATT 1263953 Score = 185 bits (204), Expect = 2e-41 Identities = 177/227 (78%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 104333 CCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGAT 104392 || |||| || | |||||| || || | || |||||||| |||||||| || || || Sbjct 1264408 CCACCTCGGAGACGAAGTACAAGGTGAAGAGTCGATTCTTTTTGAATATTGTAATCGGAA 1264349 Query 104393 AGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGT 104452 || || | || ||||| | ||||||||||||||| || | ||||||||||||||||| Sbjct 1264348 AGTGTACGTCCATCTTCCAATTGTTTTCCAGCAAAGATCAATCTCTGTTGATCAGGAGGA 1264289 Query 104453 ATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCTACC 104512 || |||||||| || ||||| ||||||||||||||||| | |||||| || ||| || Sbjct 1264288 ATACCTTCTTTGTCTTGAATTTTTGCTTTTACATTTTCAATGGTATCAGAAGCTTCAACT 1264229 Query 104513 TCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559 || || |||||||| || || ||||| ||||| || || || ||||| Sbjct 1264228 TCAAGAGTAATAGTTTTTCCGGTAAGAGTTTTAACGAAAATTTGCAT 1264182 Score = 158 bits (174), Expect = 3e-33 Identities = 173/230 (75%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 104330 ATTCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCA 104389 ||||| ||||| | | | ||||| ||||| ||| |||||||| ||||||||||| || Sbjct 1263727 ATTCCACCTCTCAAACGCAATACTAAATGTAGTGTTGATTCTTTTTGAATATTATAATCG 1263668 Query 104390 GATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGA 104449 || ||||| | ||| ||||| || ||||| ||||||||||| | || || ||||| ||| Sbjct 1263667 GAAAGAGTACGACCATCTTCCAGCTGTTTACCAGCAAAAATCAATCTTTGCTGATCTGGA 1263608 Query 104450 GGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCT 104509 || || || || ||||| || || || | ||| |||||||| | ||||| | ||| Sbjct 1263607 GGAATACCCTCCTTATCTTGGATTTTAGTTTTAACATTTTCAATAGTATCAGATGCTTCA 1263548 Query 104510 ACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559 ||||| | |||||| || || || ||||| || || || || || ||||| Sbjct 1263547 ACCTCCAATGTAATGGTTTTTCCCGTAAGAGTCTTAACGAAAATTTGCAT 1263498 Score = 138 bits (152), Expect = 3e-27 Identities = 169/231 (73%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 104330 ATTCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCA 104389 ||||| ||||| | | | ||||| ||||| ||| || ||||| ||||||||||| || Sbjct 1263955 ATTCCACCTCTCAAACGCAATACTAAATGTAGTGTCGACTCTTTTTGAATATTATAATCC 1263896 Query 104390 GATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGA 104449 || || || | ||| ||||| || ||||| ||||||||||| | || || ||||| || Sbjct 1263895 GAAAGTGTACGACCATCTTCCAGCTGTTTACCAGCAAAAATCAATCTTTGCTGATCTGGG 1263836 Query 104450 GGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCT 104509 || || || || ||||| || || || | ||| |||||||| | ||||| | ||| Sbjct 1263835 GGAATACCCTCCTTATCTTGGATTTTAGTTTTAACATTTTCAATAGTATCAGATGCTTCA 1263776 Query 104510 ACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCATT 104560 ||||| | || || || || || ||||| || || || || || |||||| Sbjct 1263775 ACCTCCAAAGTGATGGTTTTTCCCGTAAGAGTCTTAACGAAAATTTGCATT 1263725 >seq2021 Length=1035722 Score = 185 bits (204), Expect = 2e-41 Identities = 155/190 (82%), Gaps = 0/190 (0%) Strand=Plus/Plus Query 104370 CTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAA 104429 |||| |||||||||||||| |||| ||| | || ||||||| ||| ||||||||||||| Sbjct 239203 CTTTTTGAATATTATAGTCCGATAAAGTACGTCCATCTTCTAATTGCTTTCCAGCAAAAA 239262 Query 104430 TTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTT 104489 | || | || |||||||| ||||||||||||||||||||||| || ||||| ||||||| Sbjct 239263 TAAGACGTTGCTGATCAGGTGGTATTCCTTCTTTATCCTGAATTTTAGCTTTCACATTTT 239322 Query 104490 CTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAA 104549 ||| ||||| | |||||| || || || ||||| ||||| || | ||||| |||| Sbjct 239323 CTATAGTATCTGATGCTTCTACTTCAAGAGTGATAGTTTTACCCGTCAAAGTTTTCACAA 239382 Query 104550 ATATCTGCAT 104559 |||||||||| Sbjct 239383 ATATCTGCAT 239392 >seq2420 Length=677074 Score = 114 bits (126), Expect = 3e-20 Identities = 92/111 (83%), Gaps = 0/111 (0%) Strand=Plus/Minus Query 104348 AGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCT 104407 || || | ||||||||||||||| |||||||||||||| || || || || ||||| ||| Sbjct 459212 AGCACCAAATGTAATGTAGATTCCTTCTGAATATTATAATCTGAAAGTGTCCTACCATCT 459153 Query 104408 TCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCT 104458 || | ||||||||||||||| |||| || |||||| |||| || |||||| Sbjct 459152 TCCAATTGTTTTCCAGCAAAGATTAATCTTTGTTGACCAGGTGGAATTCCT 459102 Score = 104 bits (114), Expect = 5e-17 Identities = 89/109 (82%), Gaps = 1/109 (1%) Strand=Plus/Minus Query 104452 TATT-CCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCTA 104510 |||| ||||||||||| ||||| |||||||| |||||||| | |||||| | ||| | Sbjct 459051 TATTACCTTCTTTATCTTGAATTTTTGCTTTAACATTTTCAATGGTATCTGATGCTTCAA 458992 Query 104511 CCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559 | || || ||||||||||| ||||| || || || |||||||||||||| Sbjct 458991 CTTCAAGAGTAATAGTCTTGCCAGTTAGAGTCTTCACAAATATCTGCAT 458943 >seq613 Length=358256 Score = 104 bits (114), Expect = 5e-17 Identities = 124/168 (74%), Gaps = 3/168 (2%) Strand=Plus/Minus Query 269069 TGTGTGAGaaaaaaaTCTGAATGGGCTCTGAAATGGATAAACGAT---AGCGCGCCTTAC 269125 ||||| ||||||| || | ||||| | || ||||||||| || || || ||| Sbjct 259890 TGTGTTGCAAAAAAAGCTCATTGGGCGTTAAATTGGATAAACCATGAAAGTGCTACTTTT 259831 Query 269126 GGAGAAAGGTTAGTTGCTTTTGCCGCTGTAGAAGGTATATTCTTTTCGGGGTCTTTTGCC 269185 ||| | ||||||||||||| || ||||||||||| |||||| || ||| ||| Sbjct 259830 CCTGAACGTGTAGTTGCTTTTGCTGCAGTAGAAGGTATTTTCTTTAGTGGTAGTTTCGCC 259771 Query 269186 GCTATCTTTTGGTTGAAGAAAAGAGGCCTTATGCCAGGATTAACTTTC 269233 ||||| || ||||| || || ||||| |||||||||||| | || ||| Sbjct 259770 GCTATTTTCTGGTTAAAAAAGAGAGGTCTTATGCCAGGACTTACATTC 259723 >seq546 Length=368327 Score = 98.7 bits (108), Expect = 2e-15 Identities = 120/164 (73%), Gaps = 0/164 (0%) Strand=Plus/Plus Query 238527 AATGATAGAAGAAAATATATTTACTCTTTAAAACAGCTCGAGAGAGCCGAAACTCACGAT 238586 || |||| |||||||||||| || | |||||| || | || | | |||||||| ||| Sbjct 22388 AAGGATAAAAGAAAATATATATATTTTTTAAATCATTTGGAAAATTCAGAAACTCATGAT 22447 Query 238587 CCCCTATGGAATTCCGCCCAGATACAAATGGTAAGACTAGGCAAAATGCATAGTTTCTTA 238646 | |||||| | || | |||||||||| | |||| || |||||| | || ||| Sbjct 22448 GATTTGTGGAATGCATGTCAAAATCAAATGGTAACAATAGGAAAGATGCATGGATTTTTA 22507 Query 238647 CGAATGTATTGGGCTAAAAAGATACTTGAATGGACTAGATCTCC 238690 ||||||||||||| || || ||| | ||||||||| | |||| Sbjct 22508 AGAATGTATTGGGCAAAGAAAATATTAGAATGGACTGAAACTCC 22551 Score = 86.0 bits (94), Expect = 1e-11 Identities = 83/107 (78%), Gaps = 0/107 (0%) Strand=Plus/Plus Query 238765 TAGGTTGTATGTGGTCAATATGTGGATTACACGATAGGGCATGGTCTGAGAGACCTATAT 238824 |||||||||||||||| || ||||| | || ||| | ||| | || ||| ||||| Sbjct 22750 TAGGTTGTATGTGGTCTATTTGTGGTGTCCATGATCATGGTTGGCCAGAAAGAGATATAT 22809 Query 238825 TTGGAAAAGTTAGATACATGAATTATGAAGGAACTAAGAAAAAATTT 238871 |||||||| ||||||| |||||||||||||| ||| ||||||| Sbjct 22810 TTGGAAAAATTAGATATATGAATTATGAAGGTTGTAAACGAAAATTT 22856 Score = 84.2 bits (92), Expect = 5e-11 Identities = 169/243 (70%), Gaps = 6/243 (2%) Strand=Plus/Plus Query 238275 GATCATAACAATCCTACATGTGAAGCGTTGAGTAACCTATCACCGTGGTTACATTTCGGT 238334 || ||||| |||||| || | || | ||||| ||||||| ||||| ||||| || Sbjct 22071 GAACATAATAATCCTTTATCAAATGCCATCAGTAATTTATCACCCTGGTTTCATTTTGG- 22129 Query 238335 CAT-ATATCTGCTCAACGT-GTAGTTTTAGAAACATTAAAATATAAGAGTATACATCCTA 238392 ||| || || | |||||| ||| |||| |||| | | | ||||| | || || | Sbjct 22130 CATGATCTCAGTACAACGTTGTA-TTTTGGAAATAAAAGAGTATAAAAAATTATATAAAA 22188 Query 238393 AATCTGTAAGCGTATTTT-TAGACGAAATCATCATAAGACGTGAACTAGCTGATAATTTT 238451 | || || | || ||| | || ||| ||||| ||| ||||| |||||||||| Sbjct 22189 AGTCAGTT-GAGTCCTTTATGGAAGAAGCTATCATTAGAAAAGAACTTAGTGATAATTTT 22247 Query 238452 TGCTATTATAATAAAAGATATGATTCTATAGAATCCACACATTCATGGGCACGAGAAACA 238511 |||| ||||||||||| |||||||| || ||| | || | ||||| ||||||| Sbjct 22248 TGCTTTTATAATAAAAAATATGATTTGATTGAAGGTGCCTATCCTTGGGCTATAGAAACA 22307 Query 238512 TTA 238514 ||| Sbjct 22308 TTA 22310 >seq1112 Length=5701942 Score = 91.5 bits (100), Expect = 3e-13 Identities = 212/318 (67%), Gaps = 10/318 (3%) Strand=Plus/Minus Query 165023 GAAATAAGAATAGTAGCTACTAAAAATGCTATTCATTTTATAGACCAGAAGGAAAT---- 165078 ||| | |||||||||| ||| |||| |||| |||||| | | || ||| | Sbjct 3493338 GAAGTGAGAATAGTAGTCACTGAAAAAGCTAAGCATTTTTTGAAAGAGGCAGAACTGCCT 3493279 Query 165079 --AGGAATACCTATTTATACCGATAAGGATGAATGGAATACTTGGAATAAAATACACGAT 165136 |||||| | ||| | |||| | |||||| | ||||| | | | | ||| Sbjct 3493278 CCAGGAATTCAAGTTTTATCTGATACAGTGGAATGGGCTGCTTGGCAAGACAGAGGTGAT 3493219 Query 165137 CCTGTTTTACATATAGAGCTAAGAAGATGGGCAGATATGATGTTGATAGCACCCTTAACA 165196 ||||| || ||||| || || | |||||| ||| | | || || || || ||| Sbjct 3493218 CCTGTATTGCATATTGATTTAGTGAAATGGGCCGATTTATTTTTAATTGCTCCATTAGAT 3493159 Query 165197 GCAAACAGTTTAGCGAAGATAGCTAACGGTATCTGTAATAACTTGTTAACGTGTATAGTT 165256 || || | | | | || ||||||| ||||| ||| |||| | ||||| ||| | | Sbjct 3493158 GCTAATACTCTTGGCAAAATAGCTAGTGGTATATGTGATAATATATTAACTTGTGTTGCA 3493099 Query 165257 AGAGCGTGGAAT--ATTAATAAACCTTTACTTTTCTGTCCAGCTATGAATACACTTATGT 165314 | || ||| || ||||| | ||||| | || ||||| || ||||||||| |||| Sbjct 3493098 CGTGCCTGGGATCCATTAA--AGCCTTTGGTCTTTTGTCCTGCCATGAATACAAAAATGT 3493041 Query 165315 GGGAACATCCTATTACTG 165332 ||||||||||| |||||| Sbjct 3493040 GGGAACATCCTGTTACTG 3493023 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1151362537178148