Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Apis_20cerana_20[refseq_20GCF_5F001442555.1_202015-11-12] 2,431 sequences; 228,331,812 total letters Query= NC_009904.1 Length=142072 Score E Sequences producing significant alignments: (Bits) Value seq2171 96.9 3e-15 >seq2171 Length=7937 Score = 96.9 bits (106), Expect = 3e-15 Identities = 122/168 (73%), Gaps = 0/168 (0%) Strand=Plus/Minus Query 6874 GCAAAAGAGTGGATTGCACAACGTGAATCTAGTGGTTCTTATGATGCAACAAATGGTCAG 6933 || ||||| |||||||||||||||||||| ||||||| ||| |||| ||| || | Sbjct 3346 GCTAAAGAATGGATTGCACAACGTGAATCAGGTGGTTCATATACTGCACAAAACGGGAAA 3287 Query 6934 TATATTGGTCGTTACCAATTATCTGCCTCTTATTTAAATGGTGACTATTCACCTGCCAAC 6993 ||||| || | || || | || |||||||| |||||||| |||||||| || Sbjct 3286 TATATCGGAAAATTTCAGTTGGACGAATCATATTTAAACGGTGACTACTCACCTGCTAAT 3227 Query 6994 CAAGAACGAGTAGCTGATGAGTATGTAGCAGGTCGCTATGGCTCATGG 7041 || ||||| ||||| | ||||||| | | | |||||||| ||| Sbjct 3226 CAGGAACGTGTAGCAAGTAAGTATGTGTCTGACAGGTATGGCTCTTGG 3179 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 454488588808320