Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Apis_20cerana_20[refseq_20GCF_5F001442555.1_202015-11-12] 2,431 sequences; 228,331,812 total letters Query= NC_014649.1 Length=1181549 Score E Sequences producing significant alignments: (Bits) Value seq1112 475 3e-128 seq1621 441 5e-118 seq1666 159 3e-33 seq347 152 4e-31 seq668 116 3e-20 seq2337 113 3e-19 seq1643 89.7 4e-12 seq613 89.7 4e-12 seq1876 86.0 5e-11 >seq1112 Length=5701942 Score = 475 bits (526), Expect = 3e-128 Identities = 902/1319 (68%), Gaps = 8/1319 (1%) Strand=Plus/Minus Query 517214 TTAGTAATAGTAATATTCTTGGATTTGTTTGTTGATTTATCAGCGGCAGTCACATTAAGA 517273 ||||||||||| || || || ||| || ||||||||| | |||| ||||||||| Sbjct 3628444 TTAGTAATAGTGATTTTGTTCTCTTTACCAGTAGATTTATCAACTGCAGAGACATTAAGA 3628385 Query 517274 ATACCATTGGCATCCAAATCAAATGTGACTTCAATTTGAGGGACCCCTCTCTGAGCAGGT 517333 |||||||||||||| | |||||| ||||||||||||||||| || |||| |||| || Sbjct 3628384 ATACCATTGGCATCGATATCAAAGGTGACTTCAATTTGAGGAACTCCTCGAGGAGCTGGA 3628325 Query 517334 GGGATCCCTTCCAAATTAAATGTTCCCAGATTATTATTATCTTTAGTGAATTTTCGTTCA 517393 || || || | | |||| | || | ||| |||||||| || | ||||| Sbjct 3628324 GGAATGCCACTGAGCTCAAATTTACCTAACAGATTGTTATCTTTCGTCATAGCACGTTCT 3628265 Query 517394 CCCTCGAAAATTTGGATAGTAACTACAGTTTGATTATCTGAATAAGTTGTAAATACTCTG 517453 || || | | ||| || ||| | | ||||||||| | ||| || || || | Sbjct 3628264 CCTTCATAGACTTGAATCAATACTCCTGGTTGATTATCAGCATATGTAGTGAAGGTTTGA 3628205 Query 517454 GATTTTTTACAAGGAATTGTTGTGTTTCTATCAATAATATTGGTCATAATACCACCTGCT 517513 | || || ||||| || || ||||| | ||||| | ||||||| |||||| || Sbjct 3628204 GTTTGCTTTGTTGGAATGGTAGTATTTCTCTTAATAAGAGCAGTCATAACACCACCAGCA 3628145 Query 517514 GTTTCTAAACCAAGAGAAAGAGGAGTGACATCAACTAGGACAATATTTTGAAGTTTTTCA 517573 ||||| | ||||||||| ||||| || ||||||| || | | || ||| | || |||| Sbjct 3628144 GTTTCAATACCAAGAGATAGAGGTGTTACATCAAGAAGCAATAGATCTTGTACTTCTTCA 3628085 Query 517574 TCAGTTTGACCAACAAGAATAGCTGCTTGAATAGCAGCACCATATGCAACAGCTTCATCA 517633 | | |||| |||||| || ||||| | |||||| |||||||| ||||| |||||| Sbjct 3628084 GATTTGTCACCATGAAGAATGGCAGCTTGCACAGCAGCTCCATATGCCACAGCCTCATCA 3628025 Query 517634 GGATTAACAGTTTCATTTAGTTTTTTACCATTGAAAAAATTTGAAAGAAGTTGTCTTACC 517693 ||||| | || || ||| | || || |||||||| || | ||||||| | | | Sbjct 3628024 GGATTGATAGATTTATTCAATTCCTTTCCATTGAAGAAGTCCTGCAGAAGTTTTTGAATC 3627965 Query 517694 TTAGGAATACGAGATGATCCTCCAACTAATACAATTTCATGCACCTGTGATTTATCCAGT 517753 |||||||| || | ||||| ||||| || || || || || | ||| | |||||||| | Sbjct 3627964 TTAGGAATTCGCGTGGATCCACCAACCAAAACGATATCGTGAATCTGAGCTTTATCCATT 3627905 Query 517754 TTTGAATCCAATAAAACTTTTTCAACGGGTTCAAGACCCGCTCTAAACAAGTCTGAACAA 517813 || | ||| ||| |||||| || || || || |||| || | || | ||| Sbjct 3627904 TTAGCATCGCGTAATGATTTTTCTACTGGCTCGAGTGTTCCTCTGAAGAGATCAGCACAG 3627845 Query 517814 AGTTCTTCGAATTTAGCTCTAGTAAGAGTGACATTATAATCAATTCCTTCGAACAAAGAA 517873 |||||||| ||| |||||| || | | || | |||| ||||| || | | ||| Sbjct 3627844 AGTTCTTCAAATCGAGCTCTGGTGATCGATGTATAAAAATCGATTCCCTCATAGAGCGAA 3627785 Query 517874 TCAACTTCAATCGTAGTTTGAGTCGAAGAAGATAGTGCACGTTTAGCACGTTCACATGCT 517933 |||| |||||| ||| |||||| || ||||| || | ||||| ||||| ||||| ||| Sbjct 3627784 TCAATTTCAATGCTAGCTTGAGTAGACGAAGACAGGGTGCGTTTCGCACGCTCACAAGCT 3627725 Query 517934 GTCCTTAGTCTTCGTA-AG-GCTTTTGCTGATTGATTCAAATCTGTTTTATATTTTCTCT 517991 || || | | || | || || ||| | | | | |||||| |||||||||| | | Sbjct 3627724 GTTCTCAAACGACGAAGAGCGCGTTTATT--TGCAGTTAAATCTTTTTTATATTTGCGTT 3627667 Query 517992 TGAAATCTTCAACACACCATGTTACAAGACGATTATCAAAATCTTCACCTCCCAATTTAG 518051 |||| |||| ||| | | || | ||| |||||||||||||| || || | | | Sbjct 3627666 TGAATTCTTGTACAAAGTGATTGACCATACGGTTATCAAAATCTTCGCCGCCAAGATGGG 3627607 Query 518052 TATTTCCTGACGTAGCTCTTACTTGGAAAAGTCCATCTTCAAGAGACAAAAGAGTTACAT 518111 ||| ||||| || | | || | ||||| |||||||||| | | || | |||| Sbjct 3627606 TATCTCCTGCTGTTGACTTGACCTCGAAAATGCCATCTTCAATGGTTAGAATTGAAACAT 3627547 Query 518112 CATGGGTTCCACCACCCATATCAAAAATAAGTACATTCATTTCTTTGTCTTGGTTTTTAT 518171 || ||| |||||||| | |||||||||||| || || ||| || ||||||| Sbjct 3627546 CAAAGGTGCCACCACCAAGATCAAAAATAAGGACGTTGCGTTCGCTGGTAGTTTTTTTAT 3627487 Query 518172 CAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTCTCAAAACATTAAGAC 518231 | | ||||| |||| |||||||| || || || || ||||| | ||||| || | | Sbjct 3627486 CCAAGCCATAAGCAATGGCAGCAGCGGTGGGCTCGTTGATAATACGTAAAACGTTTAAGC 3627427 Query 518232 CAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTTAAAATATGCAGGAA 518291 | | || | || || || ||||| || || | || || ||||| || || ||||| | Sbjct 3627426 CCGAGATGGTACCAGCGTCCTTAGTTGCCTGACGCTGCGAGTCGTTGAAGTAAGCAGGTA 3627367 Query 518292 CAGTAATAACGGCATCAGTTACTTCTTTACCAATATAAGCGCTTGCCGTTTGTTTCAT-T 518350 |||| || ||||||| | | || ||| || | ||| || || |||| ||||| | Sbjct 3627366 CAGTGATCACGGCATTACTGACAGTTTTTCCCAAATATGCTTCAGCTGTTTCCTTCATCT 3627307 Query 518351 TTACTTAAAATCATTGATGAAATTTGTTCTGGGGAATATTG-CTTGGATTCATTTTGATA 518409 |||| | | |||||| | || ||| |||||| | | ||| | || || || Sbjct 3627306 TTAC-CAGGACCATTGAACTCACTTCTTC-GGGGAAGAAAGTCTTCGCCTCTCCTTTGTA 3627249 Query 518410 TGATACTTCAAAATATGGTTTATTACCAACATTAATAACTTTAAATGGCCAGTATTTCAT 518469 |||||| || | || || |||| |||| | ||| |||| ||||| | ||||| Sbjct 3627248 ATATACTTGAATTTTAGGCTTGCCACCATCATTTACAACAGTAAAGGGCCAATGCTTCAT 3627189 Query 518470 ATCTGATTGAACACTTTGGTCATTAAAATCTCTACCAATTAATCGTTTTGCATCAAAAA 518528 ||| | |||||| | | || | |||| | |||||| | ||||| ||||| |||| Sbjct 3627188 ATCAGCCTGAACAGTAGGATCTTCAAAACGACGACCAATAAGGCGTTTGGCATCTAAAA 3627130 Score = 134 bits (148), Expect = 1e-25 Identities = 143/189 (76%), Gaps = 0/189 (0%) Strand=Plus/Plus Query 870792 AGAAAATTATTGTCGATTATTCTTCTCCAAATATTGCTAAAGAAATGCATATTGGACATT 870851 ||| | | ||||| |||| || ||| ||||||||||||||||||||| |||||||| Sbjct 4143898 AGAGAGTGATTGTAGATTTCTCAAGTCCTAATATTGCTAAAGAAATGCATGTTGGACATC 4143957 Query 870852 TAAGATCAACTATTATTGGTGAATCTATTTGTAGGGTATTAGAAATGTGTGGACACGATG 870911 ||||||| ||||| ||||| || |||| || | |||||| | | ||||| |||| Sbjct 4143958 TAAGATCTACTATAATTGGAGATAGTATTGCAAGATTGTTAGAATTTTTAGGACATGATG 4144017 Query 870912 TTTATCGTATTAATCATGTGGGTGATTGGGGAACTCAATTCGGTATGTTAATTGCTTATA 870971 | | | || |||||||| ||||||||||| || ||||| || ||||| || ||| || Sbjct 4144018 TATTAAGAATAAATCATGTTGGTGATTGGGGCACACAATTTGGAATGTTGATAGCTCATC 4144077 Query 870972 TTAAAAATA 870980 || || ||| Sbjct 4144078 TTCAAGATA 4144086 Score = 120 bits (132), Expect = 2e-21 Identities = 137/184 (74%), Gaps = 0/184 (0%) Strand=Plus/Minus Query 518525 AAAATAGTATTGGTTGGATTAATTGCAGCTTGATATTTGGCTGCATCTCCAATCAGATGT 518584 ||||| || ||| | || || || ||| |||||| ||||| ||||| || || | || Sbjct 3625357 AAAATGGTGTTGTTGGGGTTCATGGCAACTTGATTCTTGGCAGCATCGCCGATTAATCGT 3625298 Query 518585 TCTGTCTCTGTAAATGAAACATATGATGGAGTTGTGCGATTACCTTGATCATTCGCAATA 518644 || || || ||||||| |||||| || ||||| ||||| ||||||||||| || || Sbjct 3625297 TCAGTTTCCGTAAATGCAACATAGCTAGGTGTTGTACGATTTCCTTGATCATTAGCGATG 3625238 Query 518645 ATTTCAACTTTACCATTTTGCCATACACCTACACAACTAAAAGTTGTTCCTAAATCAATA 518704 ||||| ||||| |||| || |||| || ||||| | |||| || || | ||||||| Sbjct 3625237 ATTTCTACTTTTCCATGCTGGAATACGCCAACACAGGAATAAGTAGTGCCAAGATCAATA 3625178 Query 518705 CCAA 518708 |||| Sbjct 3625177 CCAA 3625174 >seq1621 Length=1761520 Score = 441 bits (488), Expect = 5e-118 Identities = 858/1257 (68%), Gaps = 14/1257 (1%) Strand=Plus/Minus Query 517274 ATACCATTGGCATCCAAATCAAATGTGACTTCAATTTGAGGGACCCCTCTCTGAGCAGGT 517333 |||||||| ||||| | ||||||||||| ||||||||||| || ||||| | |||||| Sbjct 595652 ATACCATTAGCATCGATGTCAAATGTGACCTCAATTTGAGGTACACCTCTAGGTGCAGGT 595593 Query 517334 GGGATCCCTTCCAAATTAAATGTTCCCAGATTATTATTATCTTTAGTGAATTTTCGTTCA 517393 || || || | | ||| |||| ||| ||||||||||||| || | || || Sbjct 595592 GGAATGCCAGTAAGTTCAAACTTTCCAAGAATATTATTATCTTTTGTCATAGCTCTCTCT 595533 Query 517394 CCCTCGAAAATTTGGATAGTAACTACAGTTTGATTATCTGAATAAGTTGTAAATACTCTG 517453 || ||| | | ||| || || ||| ||||||||| ||||| || ||||| | Sbjct 595532 CCTTCGTATACTTGAATCAAGACGCCAGGTTGATTATCGGAATAGGTAGTAAAGGTTTGC 595473 Query 517454 GATTTTTTACAAGGAATTGTTGTGTTTCTATCAATAATATTGGTCATAATACCACCTGCT 517513 | || || || || || ||||| || | || | | | ||||| | |||||| ||| Sbjct 595472 GTTTGCTTGGTTGGTATCGTCGTGTTCCTCTTGATCAAAGTTGTCATTACACCACCAGCT 595413 Query 517514 GTTTCTAAACCAAGAGAAAGAGGAGTGACATCAACTAGGACAATATTTTGAAGTTTTTCA 517573 ||||||| ||| ||||| | ||||||||||| | || | | || |||| || || | Sbjct 595412 GTTTCTATACCCAGAGACAATGGAGTGACATCCAGTAACAACAGATCCTGAACTTCTTGA 595353 Query 517574 TCAGTTTGACCAACAAGAATAGCTGCTTGAATAGCAGCACCATATGCAACAGCTTCATCA 517633 | | |||| | |||||| || || | ||| || ||||| ||||||||||| ||| Sbjct 595352 GATTTGTCACCATGCAAAATAGCGGCCTGTACAGCTGCGCCATAAGCAACAGCTTCGTCA 595293 Query 517634 GGATTAACAGTTTCATTTAGTTTTTTACCATTGAAAAAATTTGAAAGAAGTTGTCTTACC 517693 ||||| | | || || | || ||| ||||||||||| | || | || | | | Sbjct 595292 GGATTGATCGATTTGTTCAATTCTTTTCCATTGAAAAAGTCCTGTAGTAATTTTTGAATC 595233 Query 517694 TTAGGAATACGAGATGATCCTCCAACTAATACAATTTCATGCACCTGTGATTTATCCAGT 517753 || || || | | || || || ||||| || || ||| || || | ||| |||| Sbjct 595232 TTTGGTATTCTGGTAGAACCACCGACTAAAACGATACTATGAACATGAGCTTTGTCCATC 595173 Query 517754 TTTGAATCCAATAAAACTTTTTCAACGGGTTCAAGACCCGCTCTAAACAAGTCTGAACAA 517813 || | ||| ||| |||||||||| ||||| || ||| || | || | ||| Sbjct 595172 TTGGCATCTCTCAAAGCTTTTTCAACCGGTTCCAGTGTACTTCTGAATAGATCCGCGCAA 595113 Query 517814 AGTTCTTCGAATTTAGCTCTAGTAA--GA-GTGACATTATAATCAATTCCTTCGAACAAA 517870 |||||||| ||| | ||||| |||| || ||| | ||||||| || ||||| | | Sbjct 595112 AGTTCTTCAAATCTGGCTCTGGTAATCGATGTG---TAGAAATCAATGCCCTCGAAAAGA 595056 Query 517871 GAATCAACTTCAATCGTAGTTTGAGTCGAAGAAGATAGTGCACGTTTAGCACGTTCACAT 517930 ||||| | |||||| | | ||| |||||||| || | | || || | ||||| Sbjct 595055 GAATCGATTTCAATACTGGCTTGTGTCGAAGAGCTTAAAGTTCTCTTTGCTCTCTCACAA 594996 Query 517931 GCTGTCCTTAGTCTTCGTAAGGCTTTTGCTGATTG--ATTCAAATCTGTTTTATATTTTC 517988 || || || | || || | ||| | || ||| | | || ||| | || ||||||| Sbjct 594995 GCAGTTCTCAATCGTCTAAGGGCCCT--CTTATTCGAACTTAAGTCTTTCTTGTATTTTC 594938 Query 517989 TCTTGAAATCTTCAAC-ACACCATGTTACAAGACGATTATCAAAATCTTCACCTCCCAAT 518047 ||||||| |||| ||| | | || | || | |||||||| || |||||||| || | Sbjct 594937 TCTTGAACTCTTGAACGAAATGAT-TCACCATCCGATTATCGAAGTCTTCACCACCAAGA 594879 Query 518048 TTAGTATTTCCTGACGTAGCTCTTACTTGGAAAAGTCCATCTTCAAGAGACAAAAGAGTT 518107 | ||||| || | || | | |||| || | |||||||| | | ||| | | Sbjct 594878 TGAGTATCGCCCGCTGTTGACTTCACTTCAAAGATGCCATCTTCGATGGTCAATATGGAC 594819 Query 518108 ACATCATGGGTTCCACCACCCATATCAAAAATAAGTACATTCATTTCTTTGTCTTGGTTT 518167 |||||| ||| ||||| |||| |||||| || ||||||||| |||| | | ||| Sbjct 594818 ACATCAAAGGTGCCACCTCCCAAATCAAAGATCAGTACATTCTTTTCACCGGCAGTTTTT 594759 Query 518168 TTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTCTCAAAACATTA 518227 ||||| | ||||| |||| || || || |||||||||||||| ||||| ||||| || Sbjct 594758 TTATCTAAGCCATAAGCAATCGCCGCCGCGGTTGGTTCATTAATTATTCTTAAAACGTTT 594699 Query 518228 AGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTTAAAATATGCA 518287 | || || || ||| |||||||| || ||||||||||||||||| || |||||||| Sbjct 594698 AAGCCTGCTATCGCTCCCGCATCTTTGGTAGCTTGTCTTTGTGAATCATTGAAATATGCG 594639 Query 518288 GGAACAGTAATAACGGCATCAGTTACTTCTTTACCAATATAAGCGCTTGCCGTTTGTTTC 518347 || |||||||||||||||| || ||| ||| || | || || ||| |||| ||| Sbjct 594638 GGGACAGTAATAACGGCATTGGTAACTATTTTTCCTAAGTACGCTTCTGCAGTTTCCTTC 594579 Query 518348 ATTTTACTTAAAATCATTGATGAAATTTGTTCTGGGGAATATTG-CTTGGATTCATTTTG 518406 ||||| | | | ||| || || | || ||| |||||| | | ||| | |||| || Sbjct 594578 ATTTTCGTGAGTACCATCGAAGACACTTCTTC-GGGGAAGAAAGTCTTTGTTTCACCTTT 594520 Query 518407 ATATGATACTTCAAAATATGGTTTATTACCAACATTAATAACTTTAAATGGCCAGTATTT 518466 ||| || || | | | |||||| ||| | || || || | |||||||| | ||| Sbjct 594519 ATACGAAACCTTGATCTTTGGTTTTCCTCCATCGTTCATCACCGTGAATGGCCAATGTTT 594460 Query 518467 CATATCTGATTGAACACTTTGGTCATTAAAATCTCTACCAATTAATCGTTTTGCATC 518523 |||||| ||| || || |||| || | ||| || |||| ||| ||||| Sbjct 594459 CATATCACTTTGTACTGTTGTATCATCGAACCGACGACCGATCAATCTTTTCGCATC 594403 Score = 129 bits (142), Expect = 4e-24 Identities = 140/186 (75%), Gaps = 0/186 (0%) Strand=Plus/Minus Query 518523 CAAAAATAGTATTGGTTGGATTAATTGCAGCTTGATATTTGGCTGCATCTCCAATCAGAT 518582 |||||||||| ||| | || || ||||| | |||| |||||| ||||| ||||| | Sbjct 593949 CAAAAATAGTGTTGTTCGGGTTCATTGCGACCTGATTTTTGGCCGCATCGCCAATTAATC 593890 Query 518583 GTTCTGTCTCTGTAAATGAAACATATGATGGAGTTGTGCGATTACCTTGATCATTCGCAA 518642 |||||| || || || | ||||| || || || ||||| ||||| ||||| |||| Sbjct 593889 TTTCTGTGTCCGTGAAGGCGACATAACTCGGTGTCGTTCGATTTCCTTGGTCATTTGCAA 593830 Query 518643 TAATTTCAACTTTACCATTTTGCCATACACCTACACAACTAAAAGTTGTTCCTAAATCAA 518702 ||||||||||||| |||| || | ||||| || ||| | |||| || |||||||||| Sbjct 593829 TAATTTCAACTTTTCCATGCTGGAAAACACCCACGCAAGAATAAGTAGTACCTAAATCAA 593770 Query 518703 TACCAA 518708 | |||| Sbjct 593769 TTCCAA 593764 >seq1666 Length=1642848 Score = 159 bits (176), Expect = 3e-33 Identities = 284/410 (69%), Gaps = 7/410 (2%) Strand=Plus/Plus Query 518259 CTTGTCTTTGTGAATCGTTAAAATATGCAGGAACAGTAATAACGGCATCAGTTACTTCTT 518318 |||||||||||| ||| |||||||| || || ||||| | || |||| ||| |||| || Sbjct 1331695 CTTGTCTTTGTGCATCATTAAAATAAGCTGGTACAGTGACTACAGCATGAGTAACTTTTT 1331754 Query 518319 TACCAATATAAGCGCTTGCCGTTTGTTTCATTTTACTTAAAATCATTGATGAAATTTGTT 518378 | || | ||| || ||| |||| ||||||||||| | | ||| | ||||||| || Sbjct 1331755 TGCCTAAATATGCTTCTGCTGTTTCTTTCATTTTACCAAGTACCATAGCAGAAATTTCTT 1331814 Query 518379 CTGGGGAATATTGCTTGGATTCATTTTGA--TATGATACTTCAAAATATGGTTTATTACC 518436 | || | | || || |||| | | || || ||| | || ||||| || Sbjct 1331815 CAGGTGCAAATACTTTCTCTTCACCATTAATTACCATTCTT--ATATGCGGTTTGCTATT 1331872 Query 518437 AACATTAATAACTTTAAATGGCCAGTATTTCATATCTGATTGAACACTTTGGTCATTAAA 518496 | ||| ||||||||||| || |||| ||||| ||| ||| | | || | Sbjct 1331873 CTTTTCAATTACTTTAAATGGAAAGGATTTAATATCACGTTGTACAGTAGGATCTGACCA 1331932 Query 518497 ATCTCTACCAATTAATCGTTTTGCATCAAAAATAGTATTGGTTGGATTAATTGCAGCTTG 518556 ||||| |||||||||||||| |||||||||| ||||| ||||| | | ||| Sbjct 1331933 TTCTCTGCCAATTAATCGTTTGGCATCAAAAACTGTATTTTCAGGATTTGTAGTCAATTG 1331992 Query 518557 ATATTTGGCTGCATCTCCAATCAGATGTT--CTGTC-TCTGTAAATGAAACATATGATGG 518613 || || |||||||||||||| | ||| | || | ||||||| ||||| ||||| Sbjct 1331993 ATTCTTTGCTGCATCTCCAATTAATCGTTCACCATCAGCAGTAAATGCCACATACGATGG 1332052 Query 518614 AGTTGTGCGATTACCTTGATCATTCGCAATAATTTCAACTTTACCATTTT 518663 || | | ||| ||||||||||| || |||||||| || | ||||||| Sbjct 1332053 TGTAATTCTATTTCCTTGATCATTAGCTATAATTTCTGCTCTTCCATTTT 1332102 Score = 141 bits (156), Expect = 7e-28 Identities = 172/234 (74%), Gaps = 3/234 (1%) Strand=Plus/Plus Query 518026 ATCAAAATCTTCACCTCCCAATTTAGTATTTCCTGACGTAGCTCTTACTTGGAAAAGTCC 518085 ||||||||||||||| ||||| | ||||| || || || |||| || | ||| Sbjct 1331350 ATCAAAATCTTCACCACCCAAATGAGTATCACCATTTGTTGCCACAACTTCAAATACTCC 1331409 Query 518086 ATCTTCAAGAGACAAAAGAGTTACATCATGGGTTCCACCACCCATATCAAAAATAAGTAC 518145 || |||| | | ||| | |||||| || ||||| || | |||||||| | ||| Sbjct 1331410 ATTATCAATTGTAAGTAGACTGACATCAAAAGTACCACCGCCTAAATCAAAAACTAATAC 1331469 Query 518146 ATTCATTTCTTTGTCTTGGTTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTC 518205 ||| ||||| |||| ||||||| | |||||| |||| |||||||| || ||||| Sbjct 1331470 ATTTTTTTCTCCATCTT---TTTTATCTAAACCATAAGCAATTGCAGCAGCTGTAGGTTC 1331526 Query 518206 ATTAATAATTCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGC 518259 |||||| ||||||| |||| ||| |||| ||| |||||||||||||||| || Sbjct 1331527 ATTAATGATTCTCATAACAACAAGTCCAGAAATAGTTCCTGCATCTTTAGTAGC 1331580 Score = 116 bits (128), Expect = 3e-20 Identities = 206/299 (69%), Gaps = 6/299 (2%) Strand=Plus/Plus Query 517486 AATAATATTGGTCATAATACCACCTGCTGTTTCTAAACCAAGAGAAAGAGGAGTGACATC 517545 ||||| || ||||| | ||| || | ||||| | ||| | || ||| ||| ||||||| Sbjct 1330730 AATAAGCTTAGTCATTACACCTCCAACAGTTTCAATACCCATAGTAAGTGGATTGACATC 1330789 Query 517546 AACTAGGACAATATTTTGAAGTTTTTCATCAGTTTGACCAACAAGAATAGCTGCTTGAAT 517605 | || |||||| | | | | ||| || ||| ||| | | ||||||| | Sbjct 1330790 CAAAAGTACAATA----GCATCTGT--ATCTTGTTCTCCAGAAAGTACACCTGCTTGCAC 1330843 Query 517606 AGCAGCACCATATGCAACAGCTTCATCAGGATTAACAGTTTCATTTAGTTTTTTACCATT 517665 ||||||||||||||||||||| ||||||||||||| | | | ||| ||||||| Sbjct 1330844 AGCAGCACCATATGCAACAGCCTCATCAGGATTAATACCTCGTGATGGTTCTTTACCACC 1330903 Query 517666 GAAAAAATTTGAAAGAAGTTGTCTTACCTTAGGAATACGAGATGATCCTCCAACTAATAC 517725 || || | | || | |||| || |||||||| | || || |||||||| | ||| Sbjct 1330904 AAAGAATTCTTTAACTAATTGTTGAACTTTAGGAATTCTAGTAGAACCTCCAACAAGTAC 1330963 Query 517726 AATTTCATGCACCTGTGATTTATCCAGTTTTGAATCCAATAAAACTTTTTCAACGGGTT 517784 |||||||| || | | ||||| || | ||||| ||||||||| | || |||| Sbjct 1330964 AATTTCATCTACATCTTTTTTATTCATATCAGAATCTTCTAAAACTTTCTGTACAGGTT 1331022 Score = 89.7 bits (98), Expect = 4e-12 Identities = 165/242 (68%), Gaps = 0/242 (0%) Strand=Plus/Plus Query 517249 TTTATCAGCGGCAGTCACATTAAGAATACCATTGGCATCCAAATCAAATGTGACTTCAAT 517308 |||||| | |||| || | |||||| ||||| ||||| | || || || |||||||| Sbjct 1330407 TTTATCCTCAGCAGATACTTGAAGAATTCCATTAGCATCGATTTCGAAAGTAACTTCAAT 1330466 Query 517309 TTGAGGGACCCCTCTCTGAGCAGGTGGGATCCCTTCCAAATTAAATGTTCCCAGATTATT 517368 ||| || | |||| | || ||||| || || | || |||| | || ||| || Sbjct 1330467 TTGTGGTATTCCTCGTGGTGCTGGTGGAATGCCAGTAAGATCAAATTTACCAAGAGGATG 1330526 Query 517369 ATTATCTTTAGTGAATTTTCGTTCACCCTCGAAAATTTGGATAGTAACTACAGTTTGATT 517428 ||||||||| || | | |||||||| ||| | | ||| || || ||| | ||| || Sbjct 1330527 ATTATCTTTTGTCATTGGACGTTCACCTTCGTATACTTGAATGGTTACTGTATGTTGGTT 1330586 Query 517429 ATCTGAATAAGTTGTAAATACTCTGGATTTTTTACAAGGAATTGTTGTGTTTCTATCAAT 517488 ||||| ||| | ||| | | |||||||| |||||| || ||||||| || Sbjct 1330587 GTCTGATGCAGTAGAAAAGATTTGCGATTTTTTCGTCGGAATTACAGTATTTCTATAAAC 1330646 Query 517489 AA 517490 || Sbjct 1330647 AA 1330648 >seq347 Length=455017 Score = 152 bits (168), Expect = 4e-31 Identities = 146/187 (78%), Gaps = 0/187 (0%) Strand=Plus/Plus Query 518166 TTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTCTCAAAACAT 518225 |||| || | ||||| |||| |||||| || |||||||||||||| | ||| | |||| Sbjct 421452 TTTTGTCCATGCCATATGCAAGAGCAGCTGCTGTTGGTTCATTAATTACTCTAAGTACAT 421511 Query 518226 TAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTTAAAATATG 518285 |||| ||||||||| || ||||| || || ||||||||||| ||||| |||||||||| Sbjct 421512 TAAGTCCAGCAATTTGACCAGCATCCTTGGTAGCTTGTCTTTGAGAATCATTAAAATATG 421571 Query 518286 CAGGAACAGTAATAACGGCATCAGTTACTTCTTTACCAATATAAGCGCTTGCCGTTTGTT 518345 ||||||||||||| ||||||| ||||| | || | ||| | ||| |||| || Sbjct 421572 CAGGAACAGTAATTACGGCATTTTTTACTGATGTATTTAAATATGATTCTGCTGTTTCTT 421631 Query 518346 TCATTTT 518352 ||||||| Sbjct 421632 TCATTTT 421638 Score = 114 bits (126), Expect = 1e-19 Identities = 117/153 (76%), Gaps = 0/153 (0%) Strand=Plus/Plus Query 322244 CCGTATGCAAGAGCTGCTGCAGTTGGTTCATTAATTATTTTAAGAACATCTAAACCCGCA 322303 || ||||||||||| ||||| |||||||||||||||| | |||| |||| | || ||| Sbjct 421463 CCATATGCAAGAGCAGCTGCTGTTGGTTCATTAATTACTCTAAGTACATTAAGTCCAGCA 421522 Query 322304 ATTTTAGCAGAATCAAGAGTTGCTTGTCTCTGTGCGTCATTAAAATATGCTGGTACAGTA 322363 |||| | ||| ||| || |||||||| || | |||||||||||||| || |||||| Sbjct 421523 ATTTGACCAGCATCCTTGGTAGCTTGTCTTTGAGAATCATTAAAATATGCAGGAACAGTA 421582 Query 322364 ATAACTGCTTTATTAATAGGTTTTTGTAAATAT 322396 || || || || || | | | | | ||||||| Sbjct 421583 ATTACGGCATTTTTTACTGATGTATTTAAATAT 421615 Score = 89.7 bits (98), Expect = 4e-12 Identities = 103/139 (74%), Gaps = 0/139 (0%) Strand=Plus/Plus Query 517259 GCAGTCACATTAAGAATACCATTGGCATCCAAATCAAATGTGACTTCAATTTGAGGGACC 517318 |||| ||||| || ||| ||||| ||||| | |||||||||||||| ||||| || || Sbjct 420053 GCAGACACATGAACAATGCCATTAGCATCAATGTCAAATGTGACTTCTATTTGTGGCACA 420112 Query 517319 CCTCTCTGAGCAGGTGGGATCCCTTCCAAATTAAATGTTCCCAGATTATTATTATCTTTA 517378 ||||| | |||||||| || || | | | ||||| ||| | | |||||||| || Sbjct 420113 CCTCTAGGTGCAGGTGGAATTCCAACAAGAGTAAATTGTCCTAAAAGTTTATTATCACTA 420172 Query 517379 GTGAATTTTCGTTCACCCT 517397 | | || |||||||||| Sbjct 420173 GCCATTTCCCGTTCACCCT 420191 >seq668 Length=2856814 Score = 116 bits (128), Expect = 3e-20 Identities = 120/154 (78%), Gaps = 6/154 (4%) Strand=Plus/Plus Query 367000 GCCACAATAGCATTTGGTATGGGTATTAATAAACCGGATGTTAGAGTTGTTATTCATTAT 367059 || |||||||||||||| ||||||||| ||||||| |||| || |||| || ||| Sbjct 2750252 GCAACAATAGCATTTGGAATGGGTATTGATAAACCAAATGTACGATTTGTAATACAT--- 2750308 Query 367060 GGAGCTC--CCAAGAA-TATTGAAGGTTATTATCAAGAAATTGGTAGAGCAGGTCGTGAT 367116 | |||| |||| | ||| ||||||||||||||||||| ||| | || ||||||||| Sbjct 2750309 GCAGCTTTACCAAAATCTATCGAAGGTTATTATCAAGAAAGTGGACGCGCTGGTCGTGAT 2750368 Query 367117 GGAGAAAAATCTTATTGTTATGCATTTTATAATT 367150 |||||||| | ||||| | ||||||||||| Sbjct 2750369 GGAGAAAATGCAGATTGTATTTTATTTTATAATT 2750402 >seq2337 Length=7230 Score = 113 bits (124), Expect = 3e-19 Identities = 122/162 (75%), Gaps = 0/162 (0%) Strand=Plus/Plus Query 668845 AAGATTAAGAGGTAAAGAAGGTCGTATTAGAGGAAATTTGATGGGAAAACGTGTCGATAT 668904 |||||||| ||| |||||||| | || |||||||||||||||| |||||||| ||| | Sbjct 4768 AAGATTAAAAGGAAAAGAAGGCAGAATACGAGGAAATTTGATGGGTAAACGTGTTGATTT 4827 Query 668905 GTCTGCACGTACAGTTATTACTTCTGATCCCAATATTGCTCTCAATGAAGTTGGTGTTCC 668964 ||||| ||||| ||||||||| ||||||| ||| | | || |||| || || || Sbjct 4828 TTCTGCTCGTACTGTTATTACTCCTGATCCTAATTTACGGATTGATCAAGTGGGCGTACC 4887 Query 668965 TCTTATTATTGCTAAAAATCTTACTTTTGACGAAATTGTAAC 669006 | | |||||| | ||| | || ||| ||||||||||| Sbjct 4888 TAGAAGCATTGCTCAGAATTTAACATTTCCTGAAATTGTAAC 4929 Score = 87.8 bits (96), Expect = 1e-11 Identities = 99/130 (76%), Gaps = 2/130 (2%) Strand=Plus/Plus Query 671612 TCCAGAGGTTTTTGTCGAAA-TTCTTTTATTGAGGGTCTTGGACCTTTTGAATTTTTCTT 671670 |||||||| || ||||||| ||| | | ||| ||| | || | |||||||| || Sbjct 6200 TCCAGAGGATTC-GTCGAAAATTCGTATCTTGCTGGTTTGACTCCATCTGAATTTTATTT 6258 Query 671671 CCAAGTAATGGCAGGTCGTGAAGGTATTATTAATACGGCTATTAAAACTGCTGATACTGG 671730 || | |||| |||||||||||| ||||| |||| ||| | |||||||| || ||||| Sbjct 6259 TCATGCTATGGGTGGTCGTGAAGGTCTTATTGATACTGCTGTAAAAACTGCAGAAACTGG 6318 Query 671731 TTATATTCAA 671740 |||||||||| Sbjct 6319 TTATATTCAA 6328 >seq1643 Length=1751358 Score = 89.7 bits (98), Expect = 4e-12 Identities = 124/173 (72%), Gaps = 3/173 (2%) Strand=Plus/Minus Query 327850 TGCCTCGGAAGAAGACATTAAAAAAGCTTATAGAAAACTGGCTATCAAATATCATCCTGA 327909 |||| | || || || || |||||||| ||||||||| | || | |||||||||||||| Sbjct 1193628 TGCCACTGATGATGAAATAAAAAAAGCATATAGAAAATTAGCATTGAAATATCATCCTGA 1193569 Query 327910 CAAAAATAAAGGAAATCCTGAAGCCGAGGAAATGTTCAAGAAGATTAATCATGCCAATAG 327969 ||||||| ||| | ||| ||| || |||| || || | || | | || || Sbjct 1193568 TAAAAATA---GAAGTGCTGGAGCAGAAGAAAAATTTAAAGAAATAGCTGAAGCTTATGA 1193512 Query 327970 TATTTTGTCTAATTCTGAAAAGAGAAGAGTTTATGATCAATATGGTGAAGAAG 328022 || | ||| || || |||||||| ||| |||||| ||| ||| ||||||| Sbjct 1193511 AGTTCTTTCTGATGCTAAAAAGAGAGAAGTCTATGATAAATTTGGAGAAGAAG 1193459 >seq613 Length=358256 Score = 89.7 bits (98), Expect = 4e-12 Identities = 140/200 (70%), Gaps = 3/200 (2%) Strand=Plus/Plus Query 397469 GAATACATTTCTCCATGAGCATTTTCCATTGCATATTGGAAACCATAAGCACATTCAGCT 397528 |||||||||||| |||| |||||||||| ||| ||| ||||||||| ||| || Sbjct 260033 GAATACATTTCTGAATGAACATTTTCCATGGCAACTTGAAAACCATAAAAACAACGTGCC 260092 Query 397529 TCTTTTATTTTCACAACATCAATAAGATTTTCTTTAATATTAGCATTAACAATACCATCA 397588 ||| |||||| || | | | ||| ||| || ||| |||| || || |||||| Sbjct 260093 TCTGTTATTTGTACTTCTTGACTAAATCGTTCAACAAGATTCTCATTGACGATTCCATCA 260152 Query 397589 GCTGCCGCAAAAAATGCCAATACGTGCATAATAAAATTTCTATCATCATCGCTCAAATGA 397648 | || ||||||||||| || || || ||||||| | | ||| || | || | Sbjct 260153 GAAGCTGCAAAAAATGCTAAGACATGAGATATAAAATGTTTTTCACTGTCAGTTAA---A 260209 Query 397649 TTATTCCAATCATTCACATC 397668 |||||||||||| ||||| Sbjct 260210 TTATTCCAATCAAATACATC 260229 >seq1876 Length=4749213 Score = 86.0 bits (94), Expect = 5e-11 Identities = 100/135 (74%), Gaps = 0/135 (0%) Strand=Plus/Plus Query 366993 TGTAGTAGCCACAATAGCATTTGGTATGGGTATTAATAAACCGGATGTTAGAGTTGTTAT 367052 |||||| || || || || ||||| | ||||| |||| || ||||||||| |||||| Sbjct 1361830 TGTAGTGGCTACTATTGCTTTTGGATTAGGTATAGATAAGCCAGATGTTAGATATGTTAT 1361889 Query 367053 TCATTATGGAGCTCCCAAGAATATTGAAGGTTATTATCAAGAAATTGGTAGAGCAGGTCG 367112 |||| || | | | || || ||| ||| ||||||||||| ||| | |||||| | Sbjct 1361890 TCATCATTGCATTTCAAAATCAATGGAAAGTTTTTATCAAGAAAGTGGACGTGCAGGTAG 1361949 Query 367113 TGATGGAGAAAAATC 367127 |||||| ||||||| Sbjct 1361950 AGATGGAAAAAAATC 1361964 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3780701765772286