Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Apis_20cerana_20[refseq_20GCF_5F001442555.1_202015-11-12] 2,431 sequences; 228,331,812 total letters Query= NC_014765.1 Length=198519 Score E Sequences producing significant alignments: (Bits) Value seq1112 419 3e-112 seq1621 408 5e-109 seq1666 118 1e-21 seq2143 109 7e-19 seq1236 86.0 8e-12 >seq1112 Length=5701942 Score = 419 bits (464), Expect = 3e-112 Identities = 893/1320 (68%), Gaps = 15/1320 (1%) Strand=Plus/Minus Query 6496 TTCGACCGTTCCTTTCAT-TTGATAACAGTAGTTTTCGAGACCATTCTTCGCCTCGACCT 6554 ||| || || | ||||| |||| | ||||| || ||||||||||| || ||| Sbjct 3628592 TTCCACTGTACTCTTCATGTTGA-AGCAGTAAGACTCAAGACCATTCTTAGCAGCGATAG 3628534 Query 6555 TTTTCGCGTACTTTTCATCTTCATCTTTATACTTTTCCGCATCTTGGACCATCTTTTCAA 6614 ||| | ||||| ||||| ||| || || || || | |||||| |||| | Sbjct 3628533 TTTCTTTTTGTTTTTCGTCTTCGCTACGATATTTCTCAGCTTCGTTGACCATTCTTTCGA 3628474 Query 6615 TGTCTTCTTTCGATAATCTCCCCTTATCATTCGTAATCGTAATCTTTTCGGATTTACCCG 6674 | |||||||| | | || ||||| || ||||| || || || | |||||| | Sbjct 3628473 TATCTTCTTTGCTGAGACGGCCTTTATCGTTAGTAATAGTGATTTTGTTCTCTTTACCAG 3628414 Query 6675 AGGCCTTATCTTCAGCACTTACATTCAAAATACCATTTGCATCAACATCGAACCTTACAT 6734 | ||||| | ||| ||||| | ||||||||| ||||| | ||| || | || | Sbjct 3628413 TAGATTTATCAACTGCAGAGACATTAAGAATACCATTGGCATCGATATCAAAGGTGACTT 3628354 Query 6735 TAATTTGTGGTGTACCCCTCG--GTGCGGCTGGAATACCCGTTAAATCAAATGTACCAAG 6792 |||||| || || ||||| | || | ||||| || | | |||||| |||| | Sbjct 3628353 CAATTTGAGGA--ACTCCTCGAGGAGCTGGAGGAATGCCACTGAGCTCAAATTTACCTAA 3628296 Query 6793 TAAACTGTTATCCGTCGCCTTCTTACGTTCACCTTCATAGACTTTAATTGTCACCGCAGG 6852 | | ||||||| ||| | | |||||| ||||||||||||| ||| || | || Sbjct 3628295 CAGATTGTTATCTTTCGTCATAGCACGTTCTCCTTCATAGACTTGAATCAATACTCCTGG 3628236 Query 6853 TTGATTATCTTGTGCCGTTGAGAAGATTTGTTCTTTCTTAGATGGAATCGTCGTATTTCT 6912 ||||||||| || | |||| |||| || ||| | |||||| || |||||||| Sbjct 3628235 TTGATTATCAGCATATGTAGTGAAGGTTTGAGTTTGCTTTGTTGGAATGGTAGTATTTCT 3628176 Query 6913 CGGAATAACCGGGGTCATAATACCACCCATAGTTTCGAGTCCAAGAGACAGAGGTGTCAC 6972 | ||||| | ||||||| |||||| |||||| | |||||||| |||||||| || Sbjct 3628175 CTTAATAAGAGCAGTCATAACACCACCAGCAGTTTCAATACCAAGAGATAGAGGTGTTAC 3628116 Query 6973 GTCCAAGAGTAACAGGTCTTGAACAGATTCGTTCCCTTCACCCGTTAAG-ATGGCGGCTT 7031 || | || || || ||||| || ||| ||| || | ||| ||||| |||| Sbjct 3628115 ATCAAGAAGCAATAGATCTTGTACTTCTTCAGATTTGTCA-CCATGAAGAATGGCAGCTT 3628057 Query 7032 GGACCGTCGCCCCGTATGCGACCGCCTCATCGGGGTTAATCGTTTTATTCAGTTCTTTAC 7091 | || | || || ||||| || |||||||| || || || | |||||||| ||| || | Sbjct 3628056 GCACAGCAGCTCCATATGCCACAGCCTCATCAGGATTGATAGATTTATTCAATTCCTTTC 3627997 Query 7092 CGTTAAAATAATCCGATAACATTTGTTGAATTTTCGGGATTCGTGTCGATCCACCGACCA 7151 | || || | ||| | | || |||||| || || ||||| || |||||||| |||| Sbjct 3627996 CATTGAAGAAGTCCTGCAGAAGTTTTTGAATCTTAGGAATTCGCGTGGATCCACCAACCA 3627937 Query 7152 AAACGATTTCATTCACTTTCGATTTATCGATCTTTGAGTCTCGAAGTGTTTTTTCGACAG 7211 ||||||| || | | | | |||||| || || | || || | || |||||| || | Sbjct 3627936 AAACGATATCGTGAATCTGAGCTTTATCCATTTTAGCATCGCGTAATGATTTTTCTACTG 3627877 Query 7212 GTTCCATACATTTACGGAACAAGTCCATACACAGTTCCTCAAAACGTGCACGGGTAATGG 7271 | || | | | ||| | || ||| ||||| ||||| || || | ||| || | Sbjct 3627876 GCTCGAGTGTTCCTCTGAAGAGATCAGCACAGAGTTCTTCAAATCGAGCTCTGGTGATCG 3627817 Query 7272 ATGTATAGAAATCAACGCCGTCGTATAACGAATCAATTTCAATGGTTGTTTGTGCCGTCG 7331 ||||||| ||||| | || || || | |||||||||||||||| | | ||| | | || Sbjct 3627816 ATGTATAAAAATCGATTCCCTCATAGAGCGAATCAATTTCAATGCTAGCTTGAGTAGACG 3627757 Query 7332 AAGATAACGTTCGCTTTGCGCGCTCACACGCCGTTCGTAAACGACGAAGGGCACGCGGGT 7391 |||| | || || || || |||||||| || |||| ||||||||||| || || | Sbjct 3627756 AAGACAGGGTGCGTTTCGCACGCTCACAAGCTGTTCTCAAACGACGAAGAGCGCGTTTAT 3627697 Query 7392 TACCGGAAATATCTTTCTTATGTTTACGTTTAAACTCTTCAGAGAAGTGTCGAAGGAGTC 7451 | | | | |||||| |||| ||| ||||| || |||| ||||| | | | Sbjct 3627696 TTGCAGTTAAATCTTTTTTATATTTGCGTTTGAATTCTTGTACAAAGTGATTGACCATAC 3627637 Query 7452 TCGAATCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGA 7511 ||| |||||||| || || | || ||||| || || || | ||||| || || | Sbjct 3627636 GGTTATCAAAATCTTCGCCGCCAAGATGGGTATCTCCTGCTGTTGACTTGACCTCGAAAA 3627577 Query 7512 TACCTCCTTCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGA 7571 | || |||||||| ||| | ||||||||||| || |||||||| || |||||||| | Sbjct 3627576 TGCCATCTTCAATGGTTAGAATTGAAACATCAAAGGTGCCACCACCAAGATCAAAAATAA 3627517 Query 7572 GTACGTT-CGTATCG-TCGTCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGT 7629 | ||||| ||| ||| | || || || ||||| | || || || || || || || || Sbjct 3627516 GGACGTTGCGT-TCGCTGGTAGTT-TTTTTATCCAAGCCATAAGCAATGGCAGCAGCGGT 3627459 Query 7630 TGGTTCATTAATAATACGAAGACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGC 7689 || || || |||||||| | | ||| | ||| | || || | || || || || || Sbjct 3627458 GGGCTCGTTGATAATACGTAAAACGTTTAAGCCCGAGATGGTACCAGCGTCCTTAGTTGC 3627399 Query 7690 TTGTCGTTGCGAATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTT 7749 || || ||||| ||||| ||||| || || || || | || || | |||| | || Sbjct 3627398 CTGACGCTGCGAGTCGTTGAAGTAAGCAGGTACAGTGATCACGGCATTACTGACAGTTTT 3627339 Query 7750 ACCGAGATACGATTCCGCGATATCTTTCATTTTGGTAAGAACCATCGATGAAATCTCTTC 7809 || | ||| | ||| || | || ||||| || || ||||| |||| || |||| Sbjct 3627338 TCCCAAATATGCTTCAGCTGTTTCCTTCATCTTTACCAGGACCAT---TGAACTCACTTC 3627282 Score = 95.1 bits (104), Expect = 2e-14 Identities = 136/191 (71%), Gaps = 3/191 (2%) Strand=Plus/Minus Query 7958 AAAACTGTGTTTTTGGGGTTCATGGCTGTTTGGTTCTTCGCCGCGTCCCCGATAAGACGT 8017 |||| ||||| |||||||||||||| ||| ||||| || || || ||||| | ||| Sbjct 3625357 AAAATGGTGTTGTTGGGGTTCATGGCAACTTGATTCTTGGCAGCATCGCCGATTAATCGT 3625298 Query 8018 TCATTATTTTCCGTAAACGCGACGTACGATGGGGTCGTTCGATTCCCTTGGTCGTTCGCA 8077 || | |||||||||| || || || || || || ||||| ||||| || || || Sbjct 3625297 TC---AGTTTCCGTAAATGCAACATAGCTAGGTGTTGTACGATTTCCTTGATCATTAGCG 3625241 Query 8078 ATAATTTCTACGCGGTCGTTTTGCCAGACGCCGACGCACGAATACGTTGTTCCTAAATCA 8137 || |||||||| | | || | ||||| || || ||||| || || || | |||| Sbjct 3625240 ATGATTTCTACTTTTCCATGCTGGAATACGCCAACACAGGAATAAGTAGTGCCAAGATCA 3625181 Query 8138 ATACCGATTGC 8148 ||||| | ||| Sbjct 3625180 ATACCAACTGC 3625170 >seq1621 Length=1761520 Score = 408 bits (452), Expect = 5e-109 Identities = 839/1232 (68%), Gaps = 34/1232 (3%) Strand=Plus/Minus Query 6704 ATACCATTTGCATCAACATCGAACCTTACATTAATTTGTGGTGTACCCCTCGGTGCGGCT 6763 |||||||| ||||| | || || | || | |||||| ||| ||| || ||||| | | Sbjct 595652 ATACCATTAGCATCGATGTCAAATGTGACCTCAATTTGAGGTACACCTCTAGGTGCAGGT 595593 Query 6764 GGAATACCCGTTAAATCAAATGTACCAAGTAAACTGTTATCCGTCGCCTTCTTACGTTCA 6823 ||||| || || | ||||| | ||||| | | | ||||| | | | | | || Sbjct 595592 GGAATGCCAGTAAGTTCAAACTTTCCAAGAATATTATTATCTTTTGTCATAGCTCTCTCT 595533 Query 6824 CCTTCATAGACTTTAATTGTCACCGCAGGTTGATTATCTTGTGCCGTTGAGAAGATTTGT 6883 ||||| || |||| ||| || ||||||||||||| || | ||| |||| Sbjct 595532 CCTTCGTATACTTGAATCAAGACGCCAGGTTGATTATCGGAATAGGTAGTAAAGGTTTGC 595473 Query 6884 TCTTTCTTAGATGGAATCGTCGTATTTCTCGGAATAACCGGGGTCATAATACCACCCATA 6943 || ||| | ||| |||||||| || ||| || | | ||||| | |||||| Sbjct 595472 GTTTGCTTGGTTGGTATCGTCGTGTTCCTCTTGATCAAAGTTGTCATTACACCACCAGCT 595413 Query 6944 GTTTCGAGTCCAAGAGACAGAGGTGTCACGTCCAAGAGTAACAGGTCTTGAAC------A 6997 ||||| | || ||||||| || || || |||| | ||||| || ||||| | Sbjct 595412 GTTTCTATACCCAGAGACAATGGAGTGACATCCAGTAACAACAGATCCTGAACTTCTTGA 595353 Query 6998 GATTCGTTCCCTTCACCCGTTAAGATGGCGGCTTGGACCGTCGCCCCGTATGCGACCGCC 7057 |||| || |||| || || ||||| || || | || || || || || || Sbjct 595352 GATTTGT------CACCATGCAAAATAGCGGCCTGTACAGCTGCGCCATAAGCAACAGCT 595299 Query 7058 TCATCGGGGTTAATCGTTTTATTCAGTTCTTTACCGTTAAAATAATCCGATAACATTTGT 7117 || || || || |||| ||| |||| |||||| || || ||| | ||| || | || | Sbjct 595298 TCGTCAGGATTGATCGATTTGTTCAATTCTTTTCCATTGAAAAAGTCCTGTAGTAATTTT 595239 Query 7118 TGAATTTTCGGGATTCGTGTCGATCCACCGACCAAAACGATTTCATTCACTTTCGATTTA 7177 ||||| || || |||| || || |||||||| |||||||| || || | | ||| Sbjct 595238 TGAATCTTTGGTATTCTGGTAGAACCACCGACTAAAACGATACTATGAACATGAGCTTTG 595179 Query 7178 TCGATCTTTGAGTCTCGAAGTGTTTTTTCGACAGGTTCCA-TACATTTACGGAACAAGTC 7236 || ||||| | |||| | | |||||| || ||||||| | | || | ||| | || Sbjct 595178 TCCATCTTGGCATCTCTCAAAGCTTTTTCAACCGGTTCCAGTGTACTT-CTGAATAGATC 595120 Query 7237 CATACACAGTTCCTCAAAACGTGCACGGGTAATGGATGTATAGAAATCAACGCCGTCGTA 7296 | || ||||| ||||| | || | |||||| ||||| |||||||||| ||| ||| | Sbjct 595119 CGCGCAAAGTTCTTCAAATCTGGCTCTGGTAATCGATGTGTAGAAATCAATGCCCTCGAA 595060 Query 7297 TAACGAATCAATTTCAATGGTTGTTTGTGCCGTCGAAGA---TAACGTTCGCTTTGCGCG 7353 | ||||| |||||||| | | ||||| ||||||| ||| |||| |||||| | Sbjct 595059 AAGAGAATCGATTTCAATACTGGCTTGTG---TCGAAGAGCTTAAAGTTCTCTTTGCTCT 595003 Query 7354 CTCACACGCCGTTCGTAAACGACGAAGGGCACGCGGGTTACCGGAAATA--TCTTTCTTA 7411 |||||| || |||| || || | |||||| | | || || | || |||||||| Sbjct 595002 CTCACAAGCAGTTCTCAATCGTCTAAGGGCCCTCTTATT--CGAACTTAAGTCTTTCTTG 594945 Query 7412 TGTTTACGTTTAAACTCTTCAGAGAAGTGTCGAAGGAGTCTCGA--ATCGAAATCTTCAC 7469 | ||| | || ||||||| | ||| || | | || ||| |||||| ||||||| Sbjct 594944 TATTTTCTCTTGAACTCTTGAACGAAATGATTCACCA-TC-CGATTATCGAAGTCTTCAC 594887 Query 7470 CACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCTCCTTCAATGTTTA 7529 |||| | || ||||| ||||| || | || ||||||||||| || |||| ||| | | Sbjct 594886 CACCAAGATGAGTATCGCCCGCTGTTGACTTCACTTCAAAGATGCCATCTTCGATGGTCA 594827 Query 7530 ACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTACGTTCGTATCGTCGT 7589 | | || |||||||| || ||||| |||| ||||| || ||||| ||| | || || Sbjct 594826 ATATGGACACATCAAAGGTGCCACCTCCCAAATCAAAGATCAGTACATTCTTTTCACCGG 594767 Query 7590 CTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCATTAATAATACGAA 7649 | | || ||||| | || || || || |||||||| |||||||||||||| || | | Sbjct 594766 CAGTTTTTTTATCTAAGCCATAAGCAATCGCCGCCGCGGTTGGTTCATTAATTATTCTTA 594707 Query 7650 GACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCGTTGCGAATCGTTAA 7709 | ||| | ||| || || | | |||||||||| || ||||||| ||| ||||| || | Sbjct 594706 AAACGTTTAAGCCTGCTATCGCTCCCGCATCTTTGGTAGCTTGTCTTTGTGAATCATTGA 594647 Query 7710 AGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACCGAGATACGATTCCGCGA 7769 | || || ||||| || | || || | || ||| | || || | |||| ||| || Sbjct 594646 AATATGCGGGGACAGTAATAACGGCATTGGTAACTATTTTTCCTAAGTACGCTTCTGCAG 594587 Query 7770 TATCTTTCATTTTGGTAAGAACCATCGATGAAATCTCTTCAGCCGCAAACTGT-TTCGTT 7828 | || |||||||| || || |||||||| || | ||||| | | | | || || ||| Sbjct 594586 TTTCCTTCATTTTCGTGAGTACCATCGAAGACACTTCTTC-GGGGAAGAAAGTCTTTGTT 594528 Query 7829 TCACCGTTAAAATCAACTTCAATCATGGGTTTATCCGCAGCACCGGGGATAACCTTATAC 7888 ||||| ||| | ||| | ||| | ||||| ||| | || || || ||| | | Sbjct 594527 TCACCTTTATACGAAACCTTGATCTTTGGTTT-TCCTC--CATCGTTCATCACCGTGAAT 594471 Query 7889 GACCAATCTTTCATATCGTCTTGGACCTGTTG 7920 | ||||| ||||||||| ||| | |||||| Sbjct 594470 GGCCAATGTTTCATATC-ACTTTGTACTGTTG 594440 Score = 95.1 bits (104), Expect = 2e-14 Identities = 140/198 (71%), Gaps = 3/198 (2%) Strand=Plus/Minus Query 7956 CAAAAACTGTGTTTTTGGGGTTCATGGCTGTTTGGTTCTTCGCCGCGTCCCCGATAAGAC 8015 |||||| ||||| || |||||||| || || || || ||||| || || || | | Sbjct 593949 CAAAAATAGTGTTGTTCGGGTTCATTGCGACCTGATTTTTGGCCGCATCGCCAATTAATC 593890 Query 8016 GTTCATTATTTTCCGTAAACGCGACGTACGATGGGGTCGTTCGATTCCCTTGGTCGTTCG 8075 ||| | | |||| || ||||| || || ||||||||||| |||||||| || | Sbjct 593889 TTTCTGTGT---CCGTGAAGGCGACATAACTCGGTGTCGTTCGATTTCCTTGGTCATTTG 593833 Query 8076 CAATAATTTCTACGCGGTCGTTTTGCCAGACGCCGACGCACGAATACGTTGTTCCTAAAT 8135 |||||||||| || | | || | || || ||||| ||||| || || ||||||| Sbjct 593832 CAATAATTTCAACTTTTCCATGCTGGAAAACACCCACGCAAGAATAAGTAGTACCTAAAT 593773 Query 8136 CAATACCGATTGCTTGAG 8153 |||| || | |||| ||| Sbjct 593772 CAATTCCAACTGCTGGAG 593755 >seq1666 Length=1642848 Score = 118 bits (130), Expect = 1e-21 Identities = 192/274 (70%), Gaps = 2/274 (1%) Strand=Plus/Plus Query 6640 ATCATTCGTAATCGTAATCTTTTCG-GATTTACCCGAGGCCTTATCTTCAGCACTTACAT 6698 |||||| ||||| ||| ||||| ||||| || | | ||||| |||||| ||| | Sbjct 1330368 ATCATTGGTAATAACAATTTTTTCACGATTT-CCAGTTCCTTTATCCTCAGCAGATACTT 1330426 Query 6699 TCAAAATACCATTTGCATCAACATCGAACCTTACATTAATTTGTGGTGTACCCCTCGGTG 6758 | ||| ||||| ||||| | ||||| | || | |||||||||| | || | |||| Sbjct 1330427 GAAGAATTCCATTAGCATCGATTTCGAAAGTAACTTCAATTTGTGGTATTCCTCGTGGTG 1330486 Query 6759 CGGCTGGAATACCCGTTAAATCAAATGTACCAAGTAAACTGTTATCCGTCGCCTTCTTAC 6818 | | |||||| || || | ||||||| ||||||| | ||||| | | | | || Sbjct 1330487 CTGGTGGAATGCCAGTAAGATCAAATTTACCAAGAGGATGATTATCTTTTGTCATTGGAC 1330546 Query 6819 GTTCACCTTCATAGACTTTAATTGTCACCGCAGGTTGATTATCTTGTGCCGTTGAGAAGA 6878 |||||||||| || |||| ||| || || | | |||| || ||| ||| || || |||| Sbjct 1330547 GTTCACCTTCGTATACTTGAATGGTTACTGTATGTTGGTTGTCTGATGCAGTAGAAAAGA 1330606 Query 6879 TTTGTTCTTTCTTAGATGGAATCGTCGTATTTCT 6912 |||| ||| || | ||||| |||||||| Sbjct 1330607 TTTGCGATTTTTTCGTCGGAATTACAGTATTTCT 1330640 Score = 104 bits (114), Expect = 3e-17 Identities = 268/403 (67%), Gaps = 13/403 (3%) Strand=Plus/Plus Query 7689 CTTGTCGTTGCGAATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCT 7748 |||||| ||| | ||| ||||| || || || || || || || || | || ||||| | Sbjct 1331695 CTTGTCTTTGTGCATCATTAAAATAAGCTGGTACAGTGACTACAGCATGAGTAACTTTTT 1331754 Query 7749 TACCGAGATACGATTCCGCGATATCTTTCATTTTGGTAAGAACCATCGATGAAATCTCTT 7808 | || | ||| | ||| || | ||||||||||| ||| ||||| | ||||| |||| Sbjct 1331755 TGCCTAAATATGCTTCTGCTGTTTCTTTCATTTTACCAAGTACCATAGCAGAAATTTCTT 1331814 Query 7809 CAGCCGCAAACTGTTTCGTTTCACCGTTAAAATCAACTTCAATCATG-GGTT---TATCC 7864 ||| ||||| |||| |||||| |||| | | ||| ||| |||| ||| | Sbjct 1331815 CAGGTGCAAATACTTTCTCTTCACCATTAATTACCA-TTCTTATATGCGGTTTGCTATTC 1331873 Query 7865 GCAGCACCGGGGATAACCTTATACGACCAATCTTTCATATCGTCTTGGACCTGTTGG-TC 7923 || || || ||| | | | ||| ||||| ||| | | || || || Sbjct 1331874 TTTTCA------ATTACTTTAAATGGAAAGGATTTAATATCACGTTGTA-CAGTAGGATC 1331926 Query 7924 CGAAAACTTTCTTCCGATAAGACGCTTTGCATCAAAAACTGTGTTTTTGGGGTTCATGGC 7983 || | | ||| || || | || || |||||||||||||| |||| || || | | Sbjct 1331927 TGACCATTCTCTGCCAATTAATCGTTTGGCATCAAAAACTGTATTTTCAGGATTTGTAGT 1331986 Query 7984 TGTTTGGTTCTTCGCCGCGTCCCCGATAAGACGTTCATTATTTTCCGTAAACGCGACGTA 8043 ||| ||||| || || || || || | |||||| || | ||||| || || || Sbjct 1331987 CAATTGATTCTTTGCTGCATCTCCAATTAATCGTTCACCATCAGCAGTAAATGCCACATA 1332046 Query 8044 CGATGGGGTCGTTCGATTCCCTTGGTCGTTCGCAATAATTTCT 8086 |||||| || ||| ||| ||||| || || || ||||||||| Sbjct 1332047 CGATGGTGTAATTCTATTTCCTTGATCATTAGCTATAATTTCT 1332089 Score = 82.4 bits (90), Expect = 1e-10 Identities = 163/237 (69%), Gaps = 7/237 (3%) Strand=Plus/Plus Query 7455 AATCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATAC 7514 |||| ||||||||||||||||| || ||||| || || || |||||||| | | Sbjct 1331349 AATCAAAATCTTCACCACCCAAATGAGTATCACCATTTGTTGCCACAACTTCAAATACTC 1331408 Query 7515 CTCCTTCAATGTTTAACAACGA--AACATCAAACGTACCACCACCCAGGTCAAAAATGAG 7572 | ||||| | ||| | || |||||||| |||||||| || | ||||||| | Sbjct 1331409 CATTATCAAT-TGTAAGTA-GACTGACATCAAAAGTACCACCGCCTAAATCAAAAACTAA 1331466 Query 7573 TACGTTCGTATCGTCGTCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGG 7632 ||| || | || | ||| || ||||| | ||| || || || || || || || || Sbjct 1331467 TACATTTTTTTCTCCATCT---TTTTTATCTAAACCATAAGCAATTGCAGCAGCTGTAGG 1331523 Query 7633 TTCATTAATAATACGAAGACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGC 7689 ||||||||| || | | | || |||| ||||||| | |||||||| || || Sbjct 1331524 TTCATTAATGATTCTCATAACAACAAGTCCAGAAATAGTTCCTGCATCTTTAGTAGC 1331580 >seq2143 Length=871716 Score = 109 bits (120), Expect = 7e-19 Identities = 155/214 (72%), Gaps = 3/214 (1%) Strand=Plus/Plus Query 11444 TTTTCTTACCAATCGCATCAATTTCATCTATAAAGATAATACACGGTTGATTTTCACGTG 11503 ||||||| |||| ||||| |||||||| ||||| | ||||| || || || |||| Sbjct 286665 TTTTCTT-CCAACGGCATCGATTTCATCAATAAATAATATACATGGAGCATGTTTCCGTG 286723 Query 11504 CCAATTCAAATATATCACGGACTCTTTTTGCGCCTACGCCTACAAACATTTCAACGAACG 11563 ||||| |||| ||||| || |||||| || || || || ||||||||||| | || Sbjct 286724 CCAATGCAAACATATCTCGAACTCTTGATGGACCAACACCAACAAACATTTCCAAAAATT 286783 Query 11564 ATGACCCCGA-ACACTGAATAAAAGGAACGGAAGATTCACCCGCTATAGCACGTGCTAAA 11622 ||| || || || || ||||||||| || | |||||| ||| |||| ||||| Sbjct 286784 CTGAGCCTGATACGCT-AATAAAAGGTACATTTGCTTCACCAGCTGTAGCCTTAGCTAAT 286842 Query 11623 AGTGTTTTACCTGTACCTGGTTTACCTGTTAATA 11656 | ||||||||| || || ||| ||| | |||| Sbjct 286843 AATGTTTTACCAGTTCCGGGTGGGCCTATAAATA 286876 >seq1236 Length=152982 Score = 86.0 bits (94), Expect = 8e-12 Identities = 170/247 (69%), Gaps = 10/247 (4%) Strand=Plus/Plus Query 183338 GCGTCTTTACCACCCATGAGACGTGTACCAAATTGACCACATGGTTCGAGTAAATTAATA 183397 || ||||| || || || | |||||||||||||||| ||||| ||||| || ||| Sbjct 60886 GCATCTTTTCCTCCTGCAAGTCTTGTACCAAATTGACCAATTGGTTGAAGTAAGTTTATA 60945 Query 183398 TTATTCGACCCCGTA--AAATTATGTGCTAATTTTACAATTGTATCTGCCA-AAGAG--A 183452 ||||| || | || ||||| ||||| | || | ||| || || || ||||| | Sbjct 60946 TTATT--ACTTCCTACGAAATTTTGTGCAAGATTAATAATAGT---TGACATAAGAGAAA 61000 Query 183453 CTTCACCGTGGTGATACGATGTTTTTTCCGAAACGTATGCGGCTAATTGCGCAACCTTCA 183512 |||| || |||||||| | || | ||| | || | | || ||||| ||||| || | Sbjct 61001 CTTCTCCATGGTGATATGCTGAATGTTCAGCTACAGAACCAGCCAATTGTGCAACTTTTA 61060 Query 183513 TTTCAGATGTAAGATTCTTTGTGAAACACGCGTATAACACTTTTCGTTGGGATGGTTTTA 183572 ||| || ||| | | ||||| | |||||| ||||||| ||| ||||| | Sbjct 61061 CTTCGCGCTTATCATTACGTTTTAAACATGTGTATAATACTTTTCTTTGTCCAGGTTTAA 61120 Query 183573 AACCATC 183579 ||||||| Sbjct 61121 AACCATC 61127 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 635113499902040