Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Apis_20cerana_20[refseq_20GCF_5F001442555.1_202015-11-12] 2,431 sequences; 228,331,812 total letters Query= NC_015780.1 Length=205791 Score E Sequences producing significant alignments: (Bits) Value seq3 120 4e-22 >seq3 Length=676877 Score = 120 bits (132), Expect = 4e-22 Identities = 135/181 (75%), Gaps = 0/181 (0%) Strand=Plus/Minus Query 104867 GAATTATTATGGGTGATGAAAGGTTTAACAAATTCTAACTTGTTAAATGAAATTGGTGTT 104926 ||||| |||||| | || ||||| | |||||| | || |||| |||| | |||| Sbjct 624803 GAATTGTTATGGTTTATTAAAGGATCCACAAATGCAAAGAAATTAAGCGAAAAGGATGTT 624744 Query 104927 AAAGTATGGAATGATAATGGTTCACGTAAGTTTTTAGATTCTTGTGGATTTCACTTTCGA 104986 | | ||| ||| ||| |||| ||| ||||||||||||||||||| ||| | | Sbjct 624743 CATATTTGGGATGCGAATAGTTCGCGTGAGTTTTTAGATTCTTGTGGTTTTATAGATAGG 624684 Query 104987 AAAGAAGGTGATTTAGGACCAATTTATGGATTTCAATGGAGACATGCTGGAGCTCAATAT 105046 ||||||| |||||||| || |||||||||||||||||||||||| ||| || |||| Sbjct 624683 GAAGAAGGAGATTTAGGTCCTATTTATGGATTTCAATGGAGACATTTTGGTGCAACATAT 624624 Query 105047 A 105047 | Sbjct 624623 A 624623 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 658383192772760