Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Apis_20cerana_20[refseq_20GCF_5F001442555.1_202015-11-12] 2,431 sequences; 228,331,812 total letters Query= NC_021248.1 Length=307691 Score E Sequences producing significant alignments: (Bits) Value seq1766 203 6e-47 seq2209 183 6e-41 seq2021 170 4e-37 seq613 118 2e-21 seq2420 113 9e-20 >seq1766 Length=1490156 Score = 203 bits (224), Expect = 6e-47 Identities = 183/230 (80%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 192307 ATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCA 192366 || |||||||| | ||| | |||||||||||| || | |||||| |||||||||||| Sbjct 1263043 ATTCCACCTCTTAAACGCAGTACTAAATGTAATGTTGACTCTTTTTGAATATTATAATCA 1262984 Query 192367 GATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGT 192426 |||||||| ||| |||| || | |||||||||||||||||| ||||| || ||||| ||| Sbjct 1262983 GATAATGTACGTCCATCTTCTAGTTGTTTACCAGCAAAGATCAATCTTTGCTGATCTGGT 1262924 Query 192427 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCT 192486 || |||||||| || ||||| ||||| ||||||||| || | |||||| | || Sbjct 1262923 GGAATTCCTTCCTTGTCTTGAATTTTCGCTTTTACATTTTCAATGGTATCTGAGGCCTCA 1262864 Query 192487 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCAT 192536 || || ||||| || |||||||| || |||||||| | ||| |||||||| Sbjct 1262863 ACCTCCAGAGTTATTGTTTTACCTGTCAATGTTTTGACAAAGATCTGCAT 1262814 Score = 178 bits (196), Expect = 3e-39 Identities = 178/231 (77%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 192307 ATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCA 192366 |||||||| | ||| ||||| || | ||| | |||| ||||| ||||| ||||| Sbjct 1263271 ATACCACCACGAAGTCGTAAAACAAGATGAAGTGTAGATTCTTTTTGAATATTGTAATCG 1263212 Query 192367 GATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGT 192426 || | || || |||| ||||| |||||||| |||||||| ||||||||||||||||| Sbjct 1263211 GAAAGAGTACGGCCATCTTCCAACTGTTTACCGGCAAAGATCAATCTCTGTTGATCAGGA 1263152 Query 192427 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCT 192486 || || ||||||||||| || |||||| ||| ||||| || | |||||| | ||| Sbjct 1263151 GGAATACCTTCTTTATCCTGAATTTTAGCTTTAACATTTTCAATGGTATCTGAAGCTTCA 1263092 Query 192487 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCATT 192537 ||||||| |||||| ||||| ||||| | |||||| | ||| || |||||| Sbjct 1263091 ACTTCTAAAGTAATAGTTTTTCCAGTGAGTGTTTTGACAAAAATTTGCATT 1263041 Score = 168 bits (186), Expect = 1e-36 Identities = 174/228 (76%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 192309 ACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCAGA 192368 |||||||| ||||| | ||| | || | ||| | ||||| ||||| ||||| || Sbjct 1264409 ACCACCTCGGAGACGAAGTACAAGGTGAAGAGTCGATTCTTTTTGAATATTGTAATCGGA 1264350 Query 192369 TAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGTGG 192428 | ||| ||| |||| ||||||||||| ||||||||||| ||||||||||||||||| || Sbjct 1264349 AAGTGTACGTCCATCTTCCAATTGTTTTCCAGCAAAGATCAATCTCTGTTGATCAGGAGG 1264290 Query 192429 TATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCTAC 192488 || |||||||| ||||| ||||| ||||||||| || | ||| || | ||| || Sbjct 1264289 AATACCTTCTTTGTCTTGAATTTTTGCTTTTACATTTTCAATGGTATCAGAAGCTTCAAC 1264230 Query 192489 TTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCAT 192536 ||| |||||||| ||||| || || | ||||||| || || ||||| Sbjct 1264229 TTCAAGAGTAATAGTTTTTCCGGTAAGAGTTTTAACGAAAATTTGCAT 1264182 Score = 159 bits (176), Expect = 7e-34 Identities = 174/231 (75%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 192307 ATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCA 192366 || |||||||| | ||| ||||||||||||| || | |||||| ||||||||||| Sbjct 1263955 ATTCCACCTCTCAAACGCAATACTAAATGTAGTGTCGACTCTTTTTGAATATTATAATCC 1263896 Query 192367 GATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGT 192426 || | ||| || |||| |||| |||||||||||||| || ||||| || ||||| || Sbjct 1263895 GAAAGTGTACGACCATCTTCCAGCTGTTTACCAGCAAAAATCAATCTTTGCTGATCTGGG 1263836 Query 192427 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCT 192486 || || || || |||||||| |||||| |||| ||||| |||| ||| || | ||| Sbjct 1263835 GGAATACCCTCCTTATCTTGGATTTTAGTTTTAACATTTTCAATAGTATCAGATGCTTCA 1263776 Query 192487 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCATT 192537 || || | ||| |||||||| || || | || |||| || || |||||| Sbjct 1263775 ACCTCCAAAGTGATGGTTTTTCCCGTAAGAGTCTTAACGAAAATTTGCATT 1263725 Score = 149 bits (164), Expect = 1e-30 Identities = 171/230 (74%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 192307 ATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCA 192366 |||||||||| |||||||| || | ||| | || | ||||| ||||| ||||| Sbjct 1263499 ATACCACCTCGAAGACGTAGAACAAGATGGAGGGTTGATTCTTTTTGAATATTGTAATCG 1263440 Query 192367 GATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGT 192426 || | || || |||| || | |||||||| |||||||| | |||||||||||||||| Sbjct 1263439 GAAAGAGTACGACCATCTTCTAGCTGTTTACCGGCAAAGATCAGTCTCTGTTGATCAGGT 1263380 Query 192427 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCT 192486 || || |||||||| ||||| ||||| ||||||||| || | ||| || | ||| Sbjct 1263379 GGAATACCTTCTTTGTCTTGAATTTTTGCTTTTACATTTTCAATGGTATCAGAAGCTTCA 1263320 Query 192487 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCAT 192536 ||||| |||||||| ||||| || || | ||||| | || || ||||| Sbjct 1263319 ACTTCAAGAGTAATAGTTTTTCCCGTAAGAGTTTTGACGAAAATTTGCAT 1263270 Score = 149 bits (164), Expect = 1e-30 Identities = 171/230 (74%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 192307 ATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCA 192366 || |||||||| | ||| ||||||||||||| || | ||||| ||||||||||| Sbjct 1263727 ATTCCACCTCTCAAACGCAATACTAAATGTAGTGTTGATTCTTTTTGAATATTATAATCG 1263668 Query 192367 GATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGT 192426 || | || || |||| |||| |||||||||||||| || ||||| || ||||| || Sbjct 1263667 GAAAGAGTACGACCATCTTCCAGCTGTTTACCAGCAAAAATCAATCTTTGCTGATCTGGA 1263608 Query 192427 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCT 192486 || || || || |||||||| |||||| |||| ||||| |||| ||| || | ||| Sbjct 1263607 GGAATACCCTCCTTATCTTGGATTTTAGTTTTAACATTTTCAATAGTATCAGATGCTTCA 1263548 Query 192487 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCAT 192536 || || | ||||||||||| || || | || |||| || || ||||| Sbjct 1263547 ACCTCCAATGTAATGGTTTTTCCCGTAAGAGTCTTAACGAAAATTTGCAT 1263498 Score = 147 bits (162), Expect = 4e-30 Identities = 171/231 (74%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 192307 ATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCA 192366 |||||||| | ||| || || || | ||| | || | ||||| ||||| ||||| Sbjct 1264183 ATACCACCACGAAGTCGCAAAACAAGATGGAGGGTTGATTCTTTTTGAATATTGTAATCG 1264124 Query 192367 GATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGT 192426 || | || || |||| || |||||||| ||||||||||| ||||||||||| ||||| Sbjct 1264123 GAAAGAGTACGACCATCTTCTAATTGTTTTCCAGCAAAGATCAATCTCTGTTGGTCAGGA 1264064 Query 192427 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCT 192486 || || |||||||| ||||| |||||| ||| ||||| |||| ||| || | ||| Sbjct 1264063 GGAATACCTTCTTTGTCTTGAATTTTAGCTTTCACATTTTCAATAGTATCGGAAGCTTCA 1264004 Query 192487 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCATT 192537 ||||||| |||||| || || || || | ||||| | || || |||||| Sbjct 1264003 ACTTCTAAAGTAATAGTCTTTCCTGTAAGAGTTTTGACGAAAATTTGCATT 1263953 >seq2209 Length=4115427 Score = 183 bits (202), Expect = 6e-41 Identities = 179/231 (77%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 192307 ATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCA 192366 ||||| |||||||| | || |||||||| | |||| || || |||||||||||| Sbjct 663846 ATACCTCCTCTAAGTCTCAACACTAAATGGAGTGTAGATTCCTTTTGGATATTATAATCT 663905 Query 192367 GATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGT 192426 || | ||||| |||| || | |||||| |||||||| || |||| |||||||| ||| Sbjct 663906 GAGAGTGTTCTACCATCTTCAAGTTGTTTGCCAGCAAAAATCAATCGTTGTTGATCTGGT 663965 Query 192427 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCT 192486 || ||||||||||||||||| || ||| |||||||| ||||| |||||| | ||| Sbjct 663966 GGAATTCCTTCTTTATCTTGAATCTTAGCCTTTACATTCTCTATAGTATCTGAAGCTTCA 664025 Query 192487 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCATT 192537 ||||| ||||| |||||||| ||||| | ||||| | ||| || |||||| Sbjct 664026 ACTTCAAGAGTGATGGTTTTTCCAGTGAGAGTTTTGACAAAGATTTGCATT 664076 Score = 179 bits (198), Expect = 7e-40 Identities = 187/243 (77%), Gaps = 2/243 (1%) Strand=Plus/Plus Query 192307 ATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCA 192366 || || |||| ||| | ||||||| ||| | ||||| |||||| ||||||||||| Sbjct 648653 ATTCCTCCTCGAAGTCTCAATACTAGATGAAGAGTAGACTCTTTCTGAATATTATAATCT 648712 Query 192367 GATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGT 192426 || | ||||| |||| || | |||||| |||||||| || || | |||||||| ||| Sbjct 648713 GAGAGTGTTCTACCATCTTCAAGTTGTTTGCCAGCAAAAATCAAACGTTGTTGATCTGGT 648772 Query 192427 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCT 192486 || ||||| ||||||||||| || ||| ||||||||| ||| | ||||| | ||| Sbjct 648773 GGAATTCCCTCTTTATCTTGAATCTTAGCTTTTACATTCTCTATTGTGTCTGAAGCTTCA 648832 Query 192487 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCA-TTTTAT-TAG 192544 ||||||| || |||||||| || ||||| || |||| ||| ||||||| |||||| ||| Sbjct 648833 ACTTCTAAGGTGATGGTTTTTCCTGTTAAAGTCTTAACAAAGATCTGCATTTTTATGTAG 648892 Query 192545 AAA 192547 ||| Sbjct 648893 AAA 648895 Score = 174 bits (192), Expect = 3e-38 Identities = 177/231 (77%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 192307 ATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCA 192366 || ||||||| ||| | ||||| | ||| | ||||| ||||| ||||| ||||| Sbjct 664074 ATTCCACCTCGAAGTCTCAATACCAGATGAAGAGTAGATTCTTTTTGAATATTGTAATCT 664133 Query 192367 GATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGT 192426 || | ||||| | |||| || | |||||| ||||||||||| |||| || ||||| || Sbjct 664134 GAGAGTGTTCTTCCATCTTCAAGTTGTTTTCCAGCAAAGATCAATCGTTGCTGATCGGGA 664193 Query 192427 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCT 192486 || ||||||||||||||||| || ||| |||||||| ||||| |||||| | ||| Sbjct 664194 GGAATTCCTTCTTTATCTTGAATCTTAGCCTTTACATTCTCTATAGTATCTGAAGCTTCA 664253 Query 192487 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCATT 192537 ||||| ||||| |||||||| ||||| | ||||| | ||| || |||||| Sbjct 664254 ACTTCAAGAGTGATGGTTTTTCCAGTGAGAGTTTTGACAAAGATTTGCATT 664304 Score = 172 bits (190), Expect = 1e-37 Identities = 176/230 (77%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 192307 ATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCA 192366 || || |||| ||| | ||||||| ||| | ||||| |||||| ||||||||||| Sbjct 663618 ATTCCTCCTCGAAGTCTCAATACTAGATGAAGAGTAGACTCTTTCTGAATATTATAATCT 663677 Query 192367 GATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGT 192426 || | ||||| |||| || | |||||| ||||||||||| |||| || |||||||| Sbjct 663678 GAGAGTGTTCTACCATCTTCAAGTTGTTTGCCAGCAAAGATCAATCGTTGCTGATCAGGA 663737 Query 192427 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCT 192486 || ||||||||||||||||| || ||| ||| ||||| ||| | |||||| | ||| Sbjct 663738 GGAATTCCTTCTTTATCTTGAATCTTAGCTTTAACATTCTCTATTGTATCTGAAGCTTCA 663797 Query 192487 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCAT 192536 ||||||| |||||||| || ||||| | ||||| | ||| || ||||| Sbjct 663798 ACTTCTAAGGTAATGGTCTTGCCAGTGAGAGTTTTGACAAAAATTTGCAT 663847 Score = 158 bits (174), Expect = 2e-33 Identities = 173/230 (75%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 192307 ATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCA 192366 || || |||| ||| | || ||||| || | |||| ||||| ||||||||||| Sbjct 648197 ATTCCCCCTCGAAGTCTCAACACTAAGTGAAGTGTAGATTCTTTCTGAATATTATAATCT 648256 Query 192367 GATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGT 192426 || | |||| | |||| || | ||||||||||||||||||||| | |||||||| || Sbjct 648257 GAAAGAGTTCTTCCATCTTCTAGTTGTTTACCAGCAAAGATTAAACGTTGTTGATCTGGA 648316 Query 192427 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCT 192486 || ||||||||||||||||| || ||| ||| ||||| ||| | ||||| | ||| Sbjct 648317 GGAATTCCTTCTTTATCTTGAATCTTAGCTTTAACATTTTCTATTGTGTCTGAAGCTTCA 648376 Query 192487 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCAT 192536 ||||||| |||||||| || ||||| | ||||| | ||| || ||||| Sbjct 648377 ACTTCTAAGGTAATGGTCTTGCCAGTGAGAGTTTTGACAAAGATTTGCAT 648426 Score = 145 bits (160), Expect = 2e-29 Identities = 173/232 (75%), Gaps = 2/232 (1%) Strand=Plus/Plus Query 192307 ATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCT-CTTTAGAGATATTATAATC 192365 ||||| |||||||| | ||||||||||| | |||| | |||| || ||||||||||| Sbjct 648425 ATACCTCCTCTAAGTCTCAATACTAAATGGAGTGTAGATTCCTTTTGA-ATATTATAATC 648483 Query 192366 AGATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGG 192425 || | |||| | |||| || | |||||||||||||| || || | || || ||||| Sbjct 648484 TGAGAGAGTTCTTCCATCTTCTAGCTGTTTACCAGCAAAAATCAAACGTTGCTGGTCAGG 648543 Query 192426 TGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTC 192485 || ||||||||||| || || || ||| |||||||| ||| | ||||| | ||| Sbjct 648544 AGGAATTCCTTCTTTGTCCTGAATCTTAGCCTTTACATTTTCTATTGTGTCTGAAGCTTC 648603 Query 192486 TACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCATT 192537 ||||| || || || ||||| ||||| | ||||| | ||| || |||||| Sbjct 648604 AACTTCAAGTGTGATAGTTTTCCCAGTAAGAGTTTTGACAAAAATTTGCATT 648655 Score = 136 bits (150), Expect = 8e-27 Identities = 167/228 (73%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 192310 CCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCAGAT 192369 || |||| ||| | ||||| || || || |||| ||||| ||||| ||||| | Sbjct 663393 CCTCCTCGAAGTCTCAATACCAAGTGCAATGTAGATTCTTTCTGAATATTGTAATCTAAG 663452 Query 192370 AATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGTGGT 192429 | ||| | | |||| || | |||||| |||||||| || |||| || |||||||| || Sbjct 663453 AGTGTCCTTCCATCTTCAAGTTGTTTTCCAGCAAAAATCAATCGTTGCTGATCAGGAGGA 663512 Query 192430 ATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCTACT 192489 ||||||||||||||||| || ||| ||||| || ||| | ||| || | ||| ||| Sbjct 663513 ATTCCTTCTTTATCTTGAATCTTAGCCTTTACGTTTTCTATTGTATCCGAAGCTTCAACT 663572 Query 192490 TCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCATT 192537 || || ||||| || || ||||| | ||||| | ||| || |||||| Sbjct 663573 TCAAGTGTAATAGTCTTTCCAGTAAGAGTTTTGACAAAAATTTGCATT 663620 >seq2021 Length=1035722 Score = 170 bits (188), Expect = 4e-37 Identities = 147/182 (81%), Gaps = 0/182 (0%) Strand=Plus/Plus Query 192355 ATATTATAATCAGATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTC 192414 |||||||| || ||||| || ||| |||| || ||||| || |||||||| || | | Sbjct 239211 ATATTATAGTCCGATAAAGTACGTCCATCTTCTAATTGCTTTCCAGCAAAAATAAGACGT 239270 Query 192415 TGTTGATCAGGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAA 192474 || |||||||||||||||||||||||||| || |||||| ||| ||||| ||||| | Sbjct 239271 TGCTGATCAGGTGGTATTCCTTCTTTATCCTGAATTTTAGCTTTCACATTTTCTATAGTA 239330 Query 192475 TCTGACGATTCTACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGC 192534 ||||| | ||||||||| ||||| || |||||||| || || ||||| | |||||||||| Sbjct 239331 TCTGATGCTTCTACTTCAAGAGTGATAGTTTTACCCGTCAAAGTTTTCACAAATATCTGC 239390 Query 192535 AT 192536 || Sbjct 239391 AT 239392 >seq613 Length=358256 Score = 118 bits (130), Expect = 2e-21 Identities = 143/195 (73%), Gaps = 0/195 (0%) Strand=Plus/Plus Query 50106 ATTAATAAAGAATACATTTCAGAATGTACAGCTTCCATAGCTATTTGAAATGAATAAAAT 50165 ||||| |||||||||||||| ||||| ||| |||||| || | |||||| |||||| Sbjct 260024 ATTAACAAAGAATACATTTCTGAATGAACATTTTCCATGGCAACTTGAAAACCATAAAAA 260083 Query 50166 TGTCTTGCTTCTGAATACTGAACTTCGGAAAAGAATCGTTCAACTAAATTCTCAGATACA 50225 | ||| |||| || ||||| | ||||||||||| | ||||||| || Sbjct 260084 CAACGTGCCTCTGTTATTTGTACTTCTTGACTAAATCGTTCAACAAGATTCTCATTGACG 260143 Query 50226 ATACCATCAGATGCTGCGAAGAATGCTAAAACGTATTTAATAAAATGTTTTTCATTATCT 50285 || |||||||| ||||| || |||||||| || | ||||||||||||||| | || Sbjct 260144 ATTCCATCAGAAGCTGCAAAAAATGCTAAGACATGAGATATAAAATGTTTTTCACTGTCA 260203 Query 50286 TTTAAATTTTCCCAA 50300 ||||||| | |||| Sbjct 260204 GTTAAATTATTCCAA 260218 Score = 104 bits (114), Expect = 5e-17 Identities = 160/225 (71%), Gaps = 4/225 (2%) Strand=Plus/Plus Query 49846 CCTCGTCCCTAGATATAAATTCATTACTAAAAGTTAATCCTGGCATTAATCCTCTCTTTT 49905 |||| || ||||| |||| ||||| || || || | ||||||||| | |||||||||| Sbjct 259695 CCTCATCTCTAGAAATAAGCTCATTGCTGAATGTAAGTCCTGGCATAAGACCTCTCTTTT 259754 Query 49906 TAAGCCAAAATATTGATGCAAAACTACTAGAAAAGAATATACCCTCGACACACGCAAATG 49965 | | ||| || || | || ||||||| | |||||| ||||| || || ||||| | Sbjct 259755 TTAACCAGAAAATAGCGGCGAAACTACCACTAAAGAAAATACCTTCTACTGCAGCAAAAG 259814 Query 49966 CTATTATTCTTGCTCCAAACATTA--ATTTATCATCTAATATCCAATTTATAGCCCAATC 50023 | | || | | | ||| | || | || |||| ||||||||||| ||||||| Sbjct 259815 CAACTACACGTTCAGGAAA-AGTAGCACTT-TCATGGTTTATCCAATTTAACGCCCAATG 259872 Query 50024 TGCtttttttttGATAGAAGGTATATTTTCTATAGCTTTAAATAA 50068 ||||||||| | | | || | |||||| ||||| |||||||| Sbjct 259873 AGCTTTTTTTGCAACACATGGCAAATTTTCGATAGCGTTAAATAA 259917 >seq2420 Length=677074 Score = 113 bits (124), Expect = 9e-20 Identities = 101/127 (80%), Gaps = 0/127 (0%) Strand=Plus/Minus Query 192309 ACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCAGA 192368 |||||| || | ||||| || |||||||| |||| || || ||||||||||| || Sbjct 459228 ACCACCCCTTAAACGTAGCACCAAATGTAATGTAGATTCCTTCTGAATATTATAATCTGA 459169 Query 192369 TAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGTGG 192428 | ||| | |||| ||||||||||| ||||||||||||||||| |||||| ||||||| Sbjct 459168 AAGTGTCCTACCATCTTCCAATTGTTTTCCAGCAAAGATTAATCTTTGTTGACCAGGTGG 459109 Query 192429 TATTCCT 192435 |||||| Sbjct 459108 AATTCCT 459102 Score = 86.0 bits (94), Expect = 1e-11 Identities = 85/109 (78%), Gaps = 1/109 (1%) Strand=Plus/Minus Query 192429 TATT-CCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCTA 192487 |||| |||||||||||||| ||||| ||| ||||| || | |||||| | ||| | Sbjct 459051 TATTACCTTCTTTATCTTGAATTTTTGCTTTAACATTTTCAATGGTATCTGATGCTTCAA 458992 Query 192488 CTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCAT 192536 |||| |||||||| || || ||||||| || || | |||||||||||| Sbjct 458991 CTTCAAGAGTAATAGTCTTGCCAGTTAGAGTCTTCACAAATATCTGCAT 458943 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 984449336216850