Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Apis_20cerana_20[refseq_20GCF_5F001442555.1_202015-11-12] 2,431 sequences; 228,331,812 total letters Query= NC_023639.1 Length=1168989 Score E Sequences producing significant alignments: (Bits) Value seq1112 488 4e-132 seq1621 453 8e-122 seq347 159 3e-33 seq1666 152 4e-31 seq668 116 3e-20 seq2337 104 2e-16 seq613 89.7 4e-12 seq1643 86.0 5e-11 >seq1112 Length=5701942 Score = 488 bits (540), Expect = 4e-132 Identities = 905/1319 (69%), Gaps = 8/1319 (1%) Strand=Plus/Minus Query 281381 TTAGTAATAGTAATATTCTTGGATTTGTTTGTTGATTTATCAGCGGCAGTCACATTAAGA 281440 ||||||||||| || || || ||| || ||||||||| | |||| ||||||||| Sbjct 3628444 TTAGTAATAGTGATTTTGTTCTCTTTACCAGTAGATTTATCAACTGCAGAGACATTAAGA 3628385 Query 281441 ATACCATTGGCATCCAAATCAAATGTGACTTCAATTTGAGGGACCCCTCTCTGAGCAGGT 281500 |||||||||||||| | |||||| ||||||||||||||||| || |||| |||| || Sbjct 3628384 ATACCATTGGCATCGATATCAAAGGTGACTTCAATTTGAGGAACTCCTCGAGGAGCTGGA 3628325 Query 281501 GGGATCCCTTCCAAATTAAATGTTCCCAGATTATTATTATCTTTAGTGAATTTTCGTTCA 281560 || || || | | |||| | || | ||| |||||||| || | ||||| Sbjct 3628324 GGAATGCCACTGAGCTCAAATTTACCTAACAGATTGTTATCTTTCGTCATAGCACGTTCT 3628265 Query 281561 CCCTCGAAAATTTGGATAGTAACTACAGTTTGATTATCTGAATAAGTTGTAAATACTCTG 281620 || || | | ||| || ||| | | ||||||||| | ||| || || || | Sbjct 3628264 CCTTCATAGACTTGAATCAATACTCCTGGTTGATTATCAGCATATGTAGTGAAGGTTTGA 3628205 Query 281621 GATTTTTTACAAGGAATTGTTGTGTTTCTATCAATAATATTGGTCATAATACCACCAGCT 281680 | || || ||||| || || ||||| | ||||| | ||||||| ||||||||| Sbjct 3628204 GTTTGCTTTGTTGGAATGGTAGTATTTCTCTTAATAAGAGCAGTCATAACACCACCAGCA 3628145 Query 281681 GTTTCTAAACCAAGAGAAAGAGGAGTGACATCAACTAGGACAATATTTTGAAGTTTTTCA 281740 ||||| | ||||||||| ||||| || ||||||| || | | || ||| | || |||| Sbjct 3628144 GTTTCAATACCAAGAGATAGAGGTGTTACATCAAGAAGCAATAGATCTTGTACTTCTTCA 3628085 Query 281741 TCAGTTTGACCAACAAGAATAGCTGCTTGAATAGCAGCACCATATGCAACAGCTTCATCA 281800 | | |||| |||||| || ||||| | |||||| |||||||| ||||| |||||| Sbjct 3628084 GATTTGTCACCATGAAGAATGGCAGCTTGCACAGCAGCTCCATATGCCACAGCCTCATCA 3628025 Query 281801 GGATTAACAGTTTCATTTAGTTTTTTACCATTGAAAAAATTTGAAAGAAGTTGTCTTACC 281860 ||||| | || || ||| | || || |||||||| || | ||||||| | | | Sbjct 3628024 GGATTGATAGATTTATTCAATTCCTTTCCATTGAAGAAGTCCTGCAGAAGTTTTTGAATC 3627965 Query 281861 TTAGGAATACGAGATGATCCTCCAACTAATACAATTTCATGCACCTGTGATTTATCCAGT 281920 |||||||| || | ||||| ||||| || || || || || | ||| | |||||||| | Sbjct 3627964 TTAGGAATTCGCGTGGATCCACCAACCAAAACGATATCGTGAATCTGAGCTTTATCCATT 3627905 Query 281921 TTTGAATCCAATAAAACTTTTTCAACGGGTTCAAGACCAGCTCTAAACAAGTCTGAACAA 281980 || | ||| ||| |||||| || || || || |||| || | || | ||| Sbjct 3627904 TTAGCATCGCGTAATGATTTTTCTACTGGCTCGAGTGTTCCTCTGAAGAGATCAGCACAG 3627845 Query 281981 AGTTCTTCGAATTTAGCTCTAGTAAGAGTGACATTATAATCAATTCCTTCGAACAAAGAA 282040 |||||||| ||| |||||| || | | || | |||| ||||| || | | ||| Sbjct 3627844 AGTTCTTCAAATCGAGCTCTGGTGATCGATGTATAAAAATCGATTCCCTCATAGAGCGAA 3627785 Query 282041 TCAACTTCAATCGTAGTTTGAGTCGAAGAAGATAGTGCACGTTTAGCACGTTCACATGCT 282100 |||| |||||| ||| |||||| || ||||| || | ||||| ||||| ||||| ||| Sbjct 3627784 TCAATTTCAATGCTAGCTTGAGTAGACGAAGACAGGGTGCGTTTCGCACGCTCACAAGCT 3627725 Query 282101 GTCCTTAGTCTTCGTA-AG-GCTTTTGCTGATTGATTCAAATCTGTTTTATATTTTCTCT 282158 || || | | || | || || ||| | | | | |||||| |||||||||| | | Sbjct 3627724 GTTCTCAAACGACGAAGAGCGCGTTTATT--TGCAGTTAAATCTTTTTTATATTTGCGTT 3627667 Query 282159 TGAAATCTTCAACACACCATGTTACAAGACGATTATCAAAATCTTCACCTCCCAATTTAG 282218 |||| |||| ||| | | || | ||| |||||||||||||| || || | | | Sbjct 3627666 TGAATTCTTGTACAAAGTGATTGACCATACGGTTATCAAAATCTTCGCCGCCAAGATGGG 3627607 Query 282219 TATTTCCTGACGTAGCTCTTACTTGGAAAAGTCCATCTTCAAGAGACAAAAGAGTAACAT 282278 ||| ||||| || | | || | ||||| |||||||||| | | || | ||||| Sbjct 3627606 TATCTCCTGCTGTTGACTTGACCTCGAAAATGCCATCTTCAATGGTTAGAATTGAAACAT 3627547 Query 282279 CATGGGTTCCACCACCCATATCAAAAATAAGTACATTCATTTCTTTGTCTTGGTTTTTAT 282338 || ||| |||||||| | |||||||||||| || || ||| || ||||||| Sbjct 3627546 CAAAGGTGCCACCACCAAGATCAAAAATAAGGACGTTGCGTTCGCTGGTAGTTTTTTTAT 3627487 Query 282339 CAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTCTCAAAACATTAAGAC 282398 | | ||||| |||| |||||||| || || || || ||||| | ||||| || | | Sbjct 3627486 CCAAGCCATAAGCAATGGCAGCAGCGGTGGGCTCGTTGATAATACGTAAAACGTTTAAGC 3627427 Query 282399 CAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTTAAAATATGCAGGAA 282458 | | || | || || || ||||| || || | || || ||||| || || ||||| | Sbjct 3627426 CCGAGATGGTACCAGCGTCCTTAGTTGCCTGACGCTGCGAGTCGTTGAAGTAAGCAGGTA 3627367 Query 282459 CAGTAATAACGGCATCTGTTACTTCTTTTCCAATATAAGCGCTTGCTGTTTGTTTCAT-T 282517 |||| || ||||||| | || |||||| | ||| || ||||||| ||||| | Sbjct 3627366 CAGTGATCACGGCATTACTGACAGTTTTTCCCAAATATGCTTCAGCTGTTTCCTTCATCT 3627307 Query 282518 TTACTTAAAATCATTGATGAAATTTGTTCTGGAGAATATTG-CTTGGATTCATTTTGATA 282576 |||| | | |||||| | || ||| || ||| | | ||| | || || || Sbjct 3627306 TTAC-CAGGACCATTGAACTCACTTCTTC-GGGGAAGAAAGTCTTCGCCTCTCCTTTGTA 3627249 Query 282577 TGATACTTCAAAATATGGTTTATTACCAACATTAATAACTTTAAATGGCCAATATTTCAT 282636 |||||| || | || || |||| |||| | ||| |||| ||||||| ||||| Sbjct 3627248 ATATACTTGAATTTTAGGCTTGCCACCATCATTTACAACAGTAAAGGGCCAATGCTTCAT 3627189 Query 282637 ATCTGATTGAACACTTTGGTCATTAAAATCTCTACCAATTAATCGTTTTGCATCAAAAA 282695 ||| | |||||| | | || | |||| | |||||| | ||||| ||||| |||| Sbjct 3627188 ATCAGCCTGAACAGTAGGATCTTCAAAACGACGACCAATAAGGCGTTTGGCATCTAAAA 3627130 Score = 134 bits (148), Expect = 1e-25 Identities = 143/189 (76%), Gaps = 0/189 (0%) Strand=Plus/Plus Query 637115 AGAAAATTATTGTCGATTATTCTTCTCCAAATATTGCTAAAGAAATGCATATTGGACATT 637174 ||| | | ||||| |||| || ||| ||||||||||||||||||||| |||||||| Sbjct 4143898 AGAGAGTGATTGTAGATTTCTCAAGTCCTAATATTGCTAAAGAAATGCATGTTGGACATC 4143957 Query 637175 TAAGATCAACTATTATTGGTGAATCTATTTGTAGGGTATTAGAAATGTGTGGACACGATG 637234 ||||||| ||||| ||||| || |||| || | |||||| | | ||||| |||| Sbjct 4143958 TAAGATCTACTATAATTGGAGATAGTATTGCAAGATTGTTAGAATTTTTAGGACATGATG 4144017 Query 637235 TTTATCGTATTAATCATGTGGGTGATTGGGGAACTCAATTCGGTATGTTAATTGCTTATA 637294 | | | || |||||||| ||||||||||| || ||||| || ||||| || ||| || Sbjct 4144018 TATTAAGAATAAATCATGTTGGTGATTGGGGCACACAATTTGGAATGTTGATAGCTCATC 4144077 Query 637295 TTAAAAATA 637303 || || ||| Sbjct 4144078 TTCAAGATA 4144086 Score = 116 bits (128), Expect = 3e-20 Identities = 136/184 (74%), Gaps = 0/184 (0%) Strand=Plus/Minus Query 282692 AAAATAGTATTGGTTGGATTAACTGCAGCTTGATATTTGGCTGCATCTCCAATCAGATGT 282751 ||||| || ||| | || || | ||| |||||| ||||| ||||| || || | || Sbjct 3625357 AAAATGGTGTTGTTGGGGTTCATGGCAACTTGATTCTTGGCAGCATCGCCGATTAATCGT 3625298 Query 282752 TCTGTCTCTGTAAATGAAACATATGATGGAGTTGTGCGATTACCTTGATCATTCGCAATA 282811 || || || ||||||| |||||| || ||||| ||||| ||||||||||| || || Sbjct 3625297 TCAGTTTCCGTAAATGCAACATAGCTAGGTGTTGTACGATTTCCTTGATCATTAGCGATG 3625238 Query 282812 ATTTCAACTTTACCATTTTGCCATACACCTACACAACTAAAAGTTGTTCCTAAATCAATA 282871 ||||| ||||| |||| || |||| || ||||| | |||| || || | ||||||| Sbjct 3625237 ATTTCTACTTTTCCATGCTGGAATACGCCAACACAGGAATAAGTAGTGCCAAGATCAATA 3625178 Query 282872 CCAA 282875 |||| Sbjct 3625177 CCAA 3625174 >seq1621 Length=1761520 Score = 453 bits (502), Expect = 8e-122 Identities = 861/1257 (68%), Gaps = 14/1257 (1%) Strand=Plus/Minus Query 281441 ATACCATTGGCATCCAAATCAAATGTGACTTCAATTTGAGGGACCCCTCTCTGAGCAGGT 281500 |||||||| ||||| | ||||||||||| ||||||||||| || ||||| | |||||| Sbjct 595652 ATACCATTAGCATCGATGTCAAATGTGACCTCAATTTGAGGTACACCTCTAGGTGCAGGT 595593 Query 281501 GGGATCCCTTCCAAATTAAATGTTCCCAGATTATTATTATCTTTAGTGAATTTTCGTTCA 281560 || || || | | ||| |||| ||| ||||||||||||| || | || || Sbjct 595592 GGAATGCCAGTAAGTTCAAACTTTCCAAGAATATTATTATCTTTTGTCATAGCTCTCTCT 595533 Query 281561 CCCTCGAAAATTTGGATAGTAACTACAGTTTGATTATCTGAATAAGTTGTAAATACTCTG 281620 || ||| | | ||| || || ||| ||||||||| ||||| || ||||| | Sbjct 595532 CCTTCGTATACTTGAATCAAGACGCCAGGTTGATTATCGGAATAGGTAGTAAAGGTTTGC 595473 Query 281621 GATTTTTTACAAGGAATTGTTGTGTTTCTATCAATAATATTGGTCATAATACCACCAGCT 281680 | || || || || || ||||| || | || | | | ||||| | |||||||||| Sbjct 595472 GTTTGCTTGGTTGGTATCGTCGTGTTCCTCTTGATCAAAGTTGTCATTACACCACCAGCT 595413 Query 281681 GTTTCTAAACCAAGAGAAAGAGGAGTGACATCAACTAGGACAATATTTTGAAGTTTTTCA 281740 ||||||| ||| ||||| | ||||||||||| | || | | || |||| || || | Sbjct 595412 GTTTCTATACCCAGAGACAATGGAGTGACATCCAGTAACAACAGATCCTGAACTTCTTGA 595353 Query 281741 TCAGTTTGACCAACAAGAATAGCTGCTTGAATAGCAGCACCATATGCAACAGCTTCATCA 281800 | | |||| | |||||| || || | ||| || ||||| ||||||||||| ||| Sbjct 595352 GATTTGTCACCATGCAAAATAGCGGCCTGTACAGCTGCGCCATAAGCAACAGCTTCGTCA 595293 Query 281801 GGATTAACAGTTTCATTTAGTTTTTTACCATTGAAAAAATTTGAAAGAAGTTGTCTTACC 281860 ||||| | | || || | || ||| ||||||||||| | || | || | | | Sbjct 595292 GGATTGATCGATTTGTTCAATTCTTTTCCATTGAAAAAGTCCTGTAGTAATTTTTGAATC 595233 Query 281861 TTAGGAATACGAGATGATCCTCCAACTAATACAATTTCATGCACCTGTGATTTATCCAGT 281920 || || || | | || || || ||||| || || ||| || || | ||| |||| Sbjct 595232 TTTGGTATTCTGGTAGAACCACCGACTAAAACGATACTATGAACATGAGCTTTGTCCATC 595173 Query 281921 TTTGAATCCAATAAAACTTTTTCAACGGGTTCAAGACCAGCTCTAAACAAGTCTGAACAA 281980 || | ||| ||| |||||||||| ||||| || | ||| || | || | ||| Sbjct 595172 TTGGCATCTCTCAAAGCTTTTTCAACCGGTTCCAGTGTACTTCTGAATAGATCCGCGCAA 595113 Query 281981 AGTTCTTCGAATTTAGCTCTAGTAA--GA-GTGACATTATAATCAATTCCTTCGAACAAA 282037 |||||||| ||| | ||||| |||| || ||| | ||||||| || ||||| | | Sbjct 595112 AGTTCTTCAAATCTGGCTCTGGTAATCGATGTG---TAGAAATCAATGCCCTCGAAAAGA 595056 Query 282038 GAATCAACTTCAATCGTAGTTTGAGTCGAAGAAGATAGTGCACGTTTAGCACGTTCACAT 282097 ||||| | |||||| | | ||| |||||||| || | | || || | ||||| Sbjct 595055 GAATCGATTTCAATACTGGCTTGTGTCGAAGAGCTTAAAGTTCTCTTTGCTCTCTCACAA 594996 Query 282098 GCTGTCCTTAGTCTTCGTAAGGCTTTTGCTGATTG--ATTCAAATCTGTTTTATATTTTC 282155 || || || | || || | ||| | || ||| | | || ||| | || ||||||| Sbjct 594995 GCAGTTCTCAATCGTCTAAGGGCCCT--CTTATTCGAACTTAAGTCTTTCTTGTATTTTC 594938 Query 282156 TCTTGAAATCTTCAAC-ACACCATGTTACAAGACGATTATCAAAATCTTCACCTCCCAAT 282214 ||||||| |||| ||| | | || | || | |||||||| || |||||||| || | Sbjct 594937 TCTTGAACTCTTGAACGAAATGAT-TCACCATCCGATTATCGAAGTCTTCACCACCAAGA 594879 Query 282215 TTAGTATTTCCTGACGTAGCTCTTACTTGGAAAAGTCCATCTTCAAGAGACAAAAGAGTA 282274 | ||||| || | || | | |||| || | |||||||| | | ||| | | Sbjct 594878 TGAGTATCGCCCGCTGTTGACTTCACTTCAAAGATGCCATCTTCGATGGTCAATATGGAC 594819 Query 282275 ACATCATGGGTTCCACCACCCATATCAAAAATAAGTACATTCATTTCTTTGTCTTGGTTT 282334 |||||| ||| ||||| |||| |||||| || ||||||||| |||| | | ||| Sbjct 594818 ACATCAAAGGTGCCACCTCCCAAATCAAAGATCAGTACATTCTTTTCACCGGCAGTTTTT 594759 Query 282335 TTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTCTCAAAACATTA 282394 ||||| | ||||| |||| || || || |||||||||||||| ||||| ||||| || Sbjct 594758 TTATCTAAGCCATAAGCAATCGCCGCCGCGGTTGGTTCATTAATTATTCTTAAAACGTTT 594699 Query 282395 AGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTTAAAATATGCA 282454 | || || || ||| |||||||| || ||||||||||||||||| || |||||||| Sbjct 594698 AAGCCTGCTATCGCTCCCGCATCTTTGGTAGCTTGTCTTTGTGAATCATTGAAATATGCG 594639 Query 282455 GGAACAGTAATAACGGCATCTGTTACTTCTTTTCCAATATAAGCGCTTGCTGTTTGTTTC 282514 || |||||||||||||||| || ||| |||||| | || || ||| |||| ||| Sbjct 594638 GGGACAGTAATAACGGCATTGGTAACTATTTTTCCTAAGTACGCTTCTGCAGTTTCCTTC 594579 Query 282515 ATTTTACTTAAAATCATTGATGAAATTTGTTCTGGAGAATATTG-CTTGGATTCATTTTG 282573 ||||| | | | ||| || || | || ||| || ||| | | ||| | |||| || Sbjct 594578 ATTTTCGTGAGTACCATCGAAGACACTTCTTC-GGGGAAGAAAGTCTTTGTTTCACCTTT 594520 Query 282574 ATATGATACTTCAAAATATGGTTTATTACCAACATTAATAACTTTAAATGGCCAATATTT 282633 ||| || || | | | |||||| ||| | || || || | |||||||||| ||| Sbjct 594519 ATACGAAACCTTGATCTTTGGTTTTCCTCCATCGTTCATCACCGTGAATGGCCAATGTTT 594460 Query 282634 CATATCTGATTGAACACTTTGGTCATTAAAATCTCTACCAATTAATCGTTTTGCATC 282690 |||||| ||| || || |||| || | ||| || |||| ||| ||||| Sbjct 594459 CATATCACTTTGTACTGTTGTATCATCGAACCGACGACCGATCAATCTTTTCGCATC 594403 Score = 123 bits (136), Expect = 2e-22 Identities = 139/186 (75%), Gaps = 0/186 (0%) Strand=Plus/Minus Query 282690 CAAAAATAGTATTGGTTGGATTAACTGCAGCTTGATATTTGGCTGCATCTCCAATCAGAT 282749 |||||||||| ||| | || || | ||| | |||| |||||| ||||| ||||| | Sbjct 593949 CAAAAATAGTGTTGTTCGGGTTCATTGCGACCTGATTTTTGGCCGCATCGCCAATTAATC 593890 Query 282750 GTTCTGTCTCTGTAAATGAAACATATGATGGAGTTGTGCGATTACCTTGATCATTCGCAA 282809 |||||| || || || | ||||| || || || ||||| ||||| ||||| |||| Sbjct 593889 TTTCTGTGTCCGTGAAGGCGACATAACTCGGTGTCGTTCGATTTCCTTGGTCATTTGCAA 593830 Query 282810 TAATTTCAACTTTACCATTTTGCCATACACCTACACAACTAAAAGTTGTTCCTAAATCAA 282869 ||||||||||||| |||| || | ||||| || ||| | |||| || |||||||||| Sbjct 593829 TAATTTCAACTTTTCCATGCTGGAAAACACCCACGCAAGAATAAGTAGTACCTAAATCAA 593770 Query 282870 TACCAA 282875 | |||| Sbjct 593769 TTCCAA 593764 >seq347 Length=455017 Score = 159 bits (176), Expect = 3e-33 Identities = 150/189 (79%), Gaps = 4/189 (2%) Strand=Plus/Plus Query 282333 TTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTCTCAAAACAT 282392 |||| || | ||||| |||| |||||| || |||||||||||||| | ||| | |||| Sbjct 421452 TTTTGTCCATGCCATATGCAAGAGCAGCTGCTGTTGGTTCATTAATTACTCTAAGTACAT 421511 Query 282393 TAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTTAAAATATG 282452 |||| ||||||||| || ||||| || || ||||||||||| ||||| |||||||||| Sbjct 421512 TAAGTCCAGCAATTTGACCAGCATCCTTGGTAGCTTGTCTTTGAGAATCATTAAAATATG 421571 Query 282453 CAGGAACAGTAATAACGGCATCTGTTACT--TCTTTTCCAATATAAGCGCTTGCTGTTTG 282510 ||||||||||||| ||||||| | ||||| | | || ||||| | |||||||| Sbjct 421572 CAGGAACAGTAATTACGGCATTTTTTACTGATGTATTTAAATAT--GATTCTGCTGTTTC 421629 Query 282511 TTTCATTTT 282519 ||||||||| Sbjct 421630 TTTCATTTT 421638 Score = 114 bits (126), Expect = 1e-19 Identities = 117/153 (76%), Gaps = 0/153 (0%) Strand=Plus/Plus Query 86119 CCGTATGCAAGAGCTGCTGCAGTTGGTTCATTAATTATTTTAAGAACATCTAAACCCGCA 86178 || ||||||||||| ||||| |||||||||||||||| | |||| |||| | || ||| Sbjct 421463 CCATATGCAAGAGCAGCTGCTGTTGGTTCATTAATTACTCTAAGTACATTAAGTCCAGCA 421522 Query 86179 ATTTTAGCAGAATCAAGAGTTGCTTGTCTCTGTGCGTCATTAAAATATGCTGGTACAGTA 86238 |||| | ||| ||| || |||||||| || | |||||||||||||| || |||||| Sbjct 421523 ATTTGACCAGCATCCTTGGTAGCTTGTCTTTGAGAATCATTAAAATATGCAGGAACAGTA 421582 Query 86239 ATAACTGCTTTATTAATAGGTTTTTGTAAATAT 86271 || || || || || | | | | | ||||||| Sbjct 421583 ATTACGGCATTTTTTACTGATGTATTTAAATAT 421615 Score = 89.7 bits (98), Expect = 4e-12 Identities = 103/139 (74%), Gaps = 0/139 (0%) Strand=Plus/Plus Query 281426 GCAGTCACATTAAGAATACCATTGGCATCCAAATCAAATGTGACTTCAATTTGAGGGACC 281485 |||| ||||| || ||| ||||| ||||| | |||||||||||||| ||||| || || Sbjct 420053 GCAGACACATGAACAATGCCATTAGCATCAATGTCAAATGTGACTTCTATTTGTGGCACA 420112 Query 281486 CCTCTCTGAGCAGGTGGGATCCCTTCCAAATTAAATGTTCCCAGATTATTATTATCTTTA 281545 ||||| | |||||||| || || | | | ||||| ||| | | |||||||| || Sbjct 420113 CCTCTAGGTGCAGGTGGAATTCCAACAAGAGTAAATTGTCCTAAAAGTTTATTATCACTA 420172 Query 281546 GTGAATTTTCGTTCACCCT 281564 | | || |||||||||| Sbjct 420173 GCCATTTCCCGTTCACCCT 420191 >seq1666 Length=1642848 Score = 152 bits (168), Expect = 4e-31 Identities = 285/413 (69%), Gaps = 13/413 (3%) Strand=Plus/Plus Query 282426 CTTGTCTTTGTGAATCGTTAAAATATGCAGGAACAGTAATAACGGCATCTGTTACTTCTT 282485 |||||||||||| ||| |||||||| || || ||||| | || |||| || |||| || Sbjct 1331695 CTTGTCTTTGTGCATCATTAAAATAAGCTGGTACAGTGACTACAGCATGAGTAACTTTTT 1331754 Query 282486 TTCCAATATAAGCGCTTGCTGTTTGTTTCATTTTACTTAAAATCATTGATGAAATTTGTT 282545 | || | ||| || |||||||| ||||||||||| | | ||| | ||||||| || Sbjct 1331755 TGCCTAAATATGCTTCTGCTGTTTCTTTCATTTTACCAAGTACCATAGCAGAAATTTCTT 1331814 Query 282546 CTGGAGAATATTGCTTGGATTCATTTTGA--TATGATACTTCAAAATATGGTTTATTACC 282603 | || | | || || |||| | | || || ||| | || ||||| || Sbjct 1331815 CAGGTGCAAATACTTTCTCTTCACCATTAATTACCATTCTT--ATATGCGGTTTGCTATT 1331872 Query 282604 AACATTAATAACTTTAAATGGCCAATATTTCATATCTGATTGAACACTTTGGTCATTAAA 282663 | ||| ||||||||||| | |||| ||||| ||| ||| | | || | Sbjct 1331873 CTTTTCAATTACTTTAAATGGAAAGGATTTAATATCACGTTGTACAGTAGGATCTGACCA 1331932 Query 282664 ATCTCTACCAATTAATCGTTTTGCATCAAAAATAGTATTGGTTGGATTAACTGCAG---C 282720 ||||| |||||||||||||| |||||||||| ||||| ||||| || || Sbjct 1331933 TTCTCTGCCAATTAATCGTTTGGCATCAAAAACTGTATTTTCAGGATT---TGTAGTCAA 1331989 Query 282721 TTGATATTTGGCTGCATCTCCAATCAGATGTT--CTGTC-TCTGTAAATGAAACATATGA 282777 ||||| || |||||||||||||| | ||| | || | ||||||| ||||| || Sbjct 1331990 TTGATTCTTTGCTGCATCTCCAATTAATCGTTCACCATCAGCAGTAAATGCCACATACGA 1332049 Query 282778 TGGAGTTGTGCGATTACCTTGATCATTCGCAATAATTTCAACTTTACCATTTT 282830 ||| || | | ||| ||||||||||| || |||||||| || | ||||||| Sbjct 1332050 TGGTGTAATTCTATTTCCTTGATCATTAGCTATAATTTCTGCTCTTCCATTTT 1332102 Score = 141 bits (156), Expect = 7e-28 Identities = 172/234 (74%), Gaps = 3/234 (1%) Strand=Plus/Plus Query 282193 ATCAAAATCTTCACCTCCCAATTTAGTATTTCCTGACGTAGCTCTTACTTGGAAAAGTCC 282252 ||||||||||||||| ||||| | ||||| || || || |||| || | ||| Sbjct 1331350 ATCAAAATCTTCACCACCCAAATGAGTATCACCATTTGTTGCCACAACTTCAAATACTCC 1331409 Query 282253 ATCTTCAAGAGACAAAAGAGTAACATCATGGGTTCCACCACCCATATCAAAAATAAGTAC 282312 || |||| | | ||| | |||||| || ||||| || | |||||||| | ||| Sbjct 1331410 ATTATCAATTGTAAGTAGACTGACATCAAAAGTACCACCGCCTAAATCAAAAACTAATAC 1331469 Query 282313 ATTCATTTCTTTGTCTTGGTTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTC 282372 ||| ||||| |||| ||||||| | |||||| |||| |||||||| || ||||| Sbjct 1331470 ATTTTTTTCTCCATCTT---TTTTATCTAAACCATAAGCAATTGCAGCAGCTGTAGGTTC 1331526 Query 282373 ATTAATAATTCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGC 282426 |||||| ||||||| |||| ||| |||| ||| |||||||||||||||| || Sbjct 1331527 ATTAATGATTCTCATAACAACAAGTCCAGAAATAGTTCCTGCATCTTTAGTAGC 1331580 Score = 122 bits (134), Expect = 7e-22 Identities = 207/299 (69%), Gaps = 6/299 (2%) Strand=Plus/Plus Query 281653 AATAATATTGGTCATAATACCACCAGCTGTTTCTAAACCAAGAGAAAGAGGAGTGACATC 281712 ||||| || ||||| | ||| ||| | ||||| | ||| | || ||| ||| ||||||| Sbjct 1330730 AATAAGCTTAGTCATTACACCTCCAACAGTTTCAATACCCATAGTAAGTGGATTGACATC 1330789 Query 281713 AACTAGGACAATATTTTGAAGTTTTTCATCAGTTTGACCAACAAGAATAGCTGCTTGAAT 281772 | || |||||| | | | | ||| || ||| ||| | | ||||||| | Sbjct 1330790 CAAAAGTACAATA----GCATCTGT--ATCTTGTTCTCCAGAAAGTACACCTGCTTGCAC 1330843 Query 281773 AGCAGCACCATATGCAACAGCTTCATCAGGATTAACAGTTTCATTTAGTTTTTTACCATT 281832 ||||||||||||||||||||| ||||||||||||| | | | ||| ||||||| Sbjct 1330844 AGCAGCACCATATGCAACAGCCTCATCAGGATTAATACCTCGTGATGGTTCTTTACCACC 1330903 Query 281833 GAAAAAATTTGAAAGAAGTTGTCTTACCTTAGGAATACGAGATGATCCTCCAACTAATAC 281892 || || | | || | |||| || |||||||| | || || |||||||| | ||| Sbjct 1330904 AAAGAATTCTTTAACTAATTGTTGAACTTTAGGAATTCTAGTAGAACCTCCAACAAGTAC 1330963 Query 281893 AATTTCATGCACCTGTGATTTATCCAGTTTTGAATCCAATAAAACTTTTTCAACGGGTT 281951 |||||||| || | | ||||| || | ||||| ||||||||| | || |||| Sbjct 1330964 AATTTCATCTACATCTTTTTTATTCATATCAGAATCTTCTAAAACTTTCTGTACAGGTT 1331022 Score = 89.7 bits (98), Expect = 4e-12 Identities = 165/242 (68%), Gaps = 0/242 (0%) Strand=Plus/Plus Query 281416 TTTATCAGCGGCAGTCACATTAAGAATACCATTGGCATCCAAATCAAATGTGACTTCAAT 281475 |||||| | |||| || | |||||| ||||| ||||| | || || || |||||||| Sbjct 1330407 TTTATCCTCAGCAGATACTTGAAGAATTCCATTAGCATCGATTTCGAAAGTAACTTCAAT 1330466 Query 281476 TTGAGGGACCCCTCTCTGAGCAGGTGGGATCCCTTCCAAATTAAATGTTCCCAGATTATT 281535 ||| || | |||| | || ||||| || || | || |||| | || ||| || Sbjct 1330467 TTGTGGTATTCCTCGTGGTGCTGGTGGAATGCCAGTAAGATCAAATTTACCAAGAGGATG 1330526 Query 281536 ATTATCTTTAGTGAATTTTCGTTCACCCTCGAAAATTTGGATAGTAACTACAGTTTGATT 281595 ||||||||| || | | |||||||| ||| | | ||| || || ||| | ||| || Sbjct 1330527 ATTATCTTTTGTCATTGGACGTTCACCTTCGTATACTTGAATGGTTACTGTATGTTGGTT 1330586 Query 281596 ATCTGAATAAGTTGTAAATACTCTGGATTTTTTACAAGGAATTGTTGTGTTTCTATCAAT 281655 ||||| ||| | ||| | | |||||||| |||||| || ||||||| || Sbjct 1330587 GTCTGATGCAGTAGAAAAGATTTGCGATTTTTTCGTCGGAATTACAGTATTTCTATAAAC 1330646 Query 281656 AA 281657 || Sbjct 1330647 AA 1330648 >seq668 Length=2856814 Score = 116 bits (128), Expect = 3e-20 Identities = 120/154 (78%), Gaps = 6/154 (4%) Strand=Plus/Plus Query 131183 GCCACAATAGCATTTGGTATGGGTATTAATAAACCGGATGTTAGAGTTGTTATTCATTAC 131242 || |||||||||||||| ||||||||| ||||||| |||| || |||| || ||| Sbjct 2750252 GCAACAATAGCATTTGGAATGGGTATTGATAAACCAAATGTACGATTTGTAATACAT--- 2750308 Query 131243 GGAGCTC--CCAAGAA-TATTGAAGGTTATTATCAAGAAATTGGTAGAGCAGGTCGTGAT 131299 | |||| |||| | ||| ||||||||||||||||||| ||| | || ||||||||| Sbjct 2750309 GCAGCTTTACCAAAATCTATCGAAGGTTATTATCAAGAAAGTGGACGCGCTGGTCGTGAT 2750368 Query 131300 GGAGAAAAATCTTATTGTTATGCATTTTATAATT 131333 |||||||| | ||||| | ||||||||||| Sbjct 2750369 GGAGAAAATGCAGATTGTATTTTATTTTATAATT 2750402 >seq2337 Length=7230 Score = 104 bits (114), Expect = 2e-16 Identities = 120/162 (74%), Gaps = 0/162 (0%) Strand=Plus/Plus Query 432278 AAGATTGAGAGGTAAAGAAGGTCGTATTAGAGGAAATTTGATGGGAAAGCGTGTCGATAT 432337 |||||| | ||| |||||||| | || |||||||||||||||| || ||||| ||| | Sbjct 4768 AAGATTAAAAGGAAAAGAAGGCAGAATACGAGGAAATTTGATGGGTAAACGTGTTGATTT 4827 Query 432338 GTCTGCACGTACAGTTATTACTTCTGATCCTAATATTGCTCTCAATGAAGTTGGTGTTCC 432397 ||||| ||||| ||||||||| ||||||||||| | | || |||| || || || Sbjct 4828 TTCTGCTCGTACTGTTATTACTCCTGATCCTAATTTACGGATTGATCAAGTGGGCGTACC 4887 Query 432398 TCTCATTATTGCGAAAAATCTTACTTTTGACGAAATTGTAAC 432439 | | ||||| | ||| | || ||| ||||||||||| Sbjct 4888 TAGAAGCATTGCTCAGAATTTAACATTTCCTGAAATTGTAAC 4929 Score = 86.0 bits (94), Expect = 5e-11 Identities = 68/82 (83%), Gaps = 0/82 (0%) Strand=Plus/Plus Query 435132 TGAATTTTTCTTCCAAGTAATGGCTGGTCGTGAAGGTATTATTAATACAGCTATTAAAAC 435191 |||||||| || || | |||| ||||||||||||| ||||| |||| ||| | ||||| Sbjct 6247 TGAATTTTATTTTCATGCTATGGGTGGTCGTGAAGGTCTTATTGATACTGCTGTAAAAAC 6306 Query 435192 TGCTGATACTGGTTATATTCAA 435213 ||| || ||||||||||||||| Sbjct 6307 TGCAGAAACTGGTTATATTCAA 6328 >seq613 Length=358256 Score = 89.7 bits (98), Expect = 4e-12 Identities = 140/200 (70%), Gaps = 3/200 (2%) Strand=Plus/Plus Query 161567 GAATACATTTCTCCATGAGCATTTTCCATTGCATATTGGAAACCATAAGCACATTCAGCT 161626 |||||||||||| |||| |||||||||| ||| ||| ||||||||| ||| || Sbjct 260033 GAATACATTTCTGAATGAACATTTTCCATGGCAACTTGAAAACCATAAAAACAACGTGCC 260092 Query 161627 TCTTTTATTTTCACAACATCAATAAGATTTTCTTTAATATTAGCATTAACAATACCATCA 161686 ||| |||||| || | | | ||| ||| || ||| |||| || || |||||| Sbjct 260093 TCTGTTATTTGTACTTCTTGACTAAATCGTTCAACAAGATTCTCATTGACGATTCCATCA 260152 Query 161687 GCTGCCGCAAAAAATGCCAATACGTGCATAATAAAATTTCTATCATCATCGCTCAAATGA 161746 | || ||||||||||| || || || ||||||| | | ||| || | || | Sbjct 260153 GAAGCTGCAAAAAATGCTAAGACATGAGATATAAAATGTTTTTCACTGTCAGTTAA---A 260209 Query 161747 TTATTCCAATCATTCACATC 161766 |||||||||||| ||||| Sbjct 260210 TTATTCCAATCAAATACATC 260229 >seq1643 Length=1751358 Score = 86.0 bits (94), Expect = 5e-11 Identities = 119/166 (72%), Gaps = 3/166 (2%) Strand=Plus/Minus Query 91798 GAAGAAGACATTAAAAAAGCTTATAGAAAACTGGCTATCAAATATCATCCTGACAAAAAT 91857 || || || || |||||||| ||||||||| | || | |||||||||||||| |||||| Sbjct 1193621 GATGATGAAATAAAAAAAGCATATAGAAAATTAGCATTGAAATATCATCCTGATAAAAAT 1193562 Query 91858 AAAGGAAATCCTGAAGCCGAGGAAATGTTCAAGAAGATTAATCATGCCAATAGTATTTTG 91917 | ||| | ||| ||| || |||| || || | || | | || || || | Sbjct 1193561 A---GAAGTGCTGGAGCAGAAGAAAAATTTAAAGAAATAGCTGAAGCTTATGAAGTTCTT 1193505 Query 91918 TCTAATTCTGAAAAGAGAAGAGTTTATGATCAATATGGTGAAGAAG 91963 ||| || || |||||||| ||| |||||| ||| ||| ||||||| Sbjct 1193504 TCTGATGCTAAAAAGAGAGAAGTCTATGATAAATTTGGAGAAGAAG 1193459 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3740511048173406