Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Apis_20cerana_20[refseq_20GCF_5F001442555.1_202015-11-12] 2,431 sequences; 228,331,812 total letters Query= NC_024446.1 Length=306862 Score E Sequences producing significant alignments: (Bits) Value seq1766 221 2e-52 seq2209 215 1e-50 seq2021 158 2e-33 seq1112 123 5e-23 seq2420 116 7e-21 seq546 113 9e-20 seq80 86.0 1e-11 >seq1766 Length=1490156 Score = 221 bits (244), Expect = 2e-52 Identities = 191/234 (82%), Gaps = 2/234 (1%) Strand=Plus/Minus Query 82584 CCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGAT 82643 || ||||| |||||||| ||||| || | || || ||||| || ||||||||||||||| Sbjct 1263040 CCACCTCTTAAACGCAGTACTAAATGTAATGTTGACTCTTTTTGAATATTATAATCAGAT 1262981 Query 82644 AGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGT 82703 | | | || |||||||||||||| ||||||||||| | |||||| |||||||| || Sbjct 1262980 AATGTACGTCCATCTTCTAGTTGTTTACCAGCAAAGATCAATCTTTGCTGATCTGGTGGA 1262921 Query 82704 ATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGG-TTCTAC 82762 ||||||||||| |||||||| || ||||||||||||||||| ||||| | ||| || || Sbjct 1262920 ATTCCTTCCTTGTCTTGAATTTTCGCTTTTACATTTTCAATGGTATC-TGAGGCCTCAAC 1262862 Query 82763 TTCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCATTATTAT 82816 |||| |||||| || || |||||||| || || ||||| |||||||| ||||| Sbjct 1262861 CTCCAGAGTTATTGTTTTACCTGTCAATGTTTTGACAAAGATCTGCATGATTAT 1262808 Score = 185 bits (204), Expect = 2e-41 Identities = 177/227 (78%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 82584 CCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGAT 82643 || ||||||||||||| ||||| || || || |||||||| || ||||||||||| || Sbjct 1263724 CCACCTCTCAAACGCAATACTAAATGTAGTGTTGATTCTTTTTGAATATTATAATCGGAA 1263665 Query 82644 AGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGT 82703 ||| | | ||| ||||| || ||||| |||||||| || | |||||| ||||||||||| Sbjct 1263664 AGAGTACGACCATCTTCCAGCTGTTTACCAGCAAAAATCAATCTTTGCTGATCTGGAGGA 1263605 Query 82704 ATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACT 82763 || || ||||||||||| || || | ||| ||||||||||| |||||| | ||| || Sbjct 1263604 ATACCCTCCTTATCTTGGATTTTAGTTTTAACATTTTCAATAGTATCAGATGCTTCAACC 1263545 Query 82764 TCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810 ||||| || || || || || || | ||||| || || || ||||| Sbjct 1263544 TCCAATGTAATGGTTTTTCCCGTAAGAGTCTTAACGAAAATTTGCAT 1263498 Score = 179 bits (198), Expect = 7e-40 Identities = 177/229 (77%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 82582 TACCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAG 82641 |||| |||| | ||| ||||| | || || || |||||||| || ||||| ||||| | Sbjct 1263498 TACCACCTCGAAGACGTAGAACAAGATGGAGGGTTGATTCTTTTTGAATATTGTAATCGG 1263439 Query 82642 ATAGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAG 82701 | ||| | | ||| |||||||| ||||| || |||||||| ||||| |||||||| || | Sbjct 1263438 AAAGAGTACGACCATCTTCTAGCTGTTTACCGGCAAAGATCAGTCTCTGTTGATCAGGTG 1263379 Query 82702 GTATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTA 82761 | || ||||| || |||||||| |||||||||||||||||||| |||||| || ||| | Sbjct 1263378 GAATACCTTCTTTGTCTTGAATTTTTGCTTTTACATTTTCAATGGTATCAGAAGCTTCAA 1263319 Query 82762 CTTCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810 |||| | ||| || || || || || | || || || || || ||||| Sbjct 1263318 CTTCAAGAGTAATAGTTTTTCCCGTAAGAGTTTTGACGAAAATTTGCAT 1263270 Score = 178 bits (196), Expect = 3e-39 Identities = 176/228 (77%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 82584 CCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGAT 82643 || ||||||||||||| ||||| || || || || ||||| || ||||||||||| || Sbjct 1263952 CCACCTCTCAAACGCAATACTAAATGTAGTGTCGACTCTTTTTGAATATTATAATCCGAA 1263893 Query 82644 AGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGT 82703 || | | ||| ||||| || ||||| |||||||| || | |||||| |||||||| || Sbjct 1263892 AGTGTACGACCATCTTCCAGCTGTTTACCAGCAAAAATCAATCTTTGCTGATCTGGGGGA 1263833 Query 82704 ATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACT 82763 || || ||||||||||| || || | ||| ||||||||||| |||||| | ||| || Sbjct 1263832 ATACCCTCCTTATCTTGGATTTTAGTTTTAACATTTTCAATAGTATCAGATGCTTCAACC 1263773 Query 82764 TCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCATT 82811 |||||||| || || || || || | ||||| || || || |||||| Sbjct 1263772 TCCAAAGTGATGGTTTTTCCCGTAAGAGTCTTAACGAAAATTTGCATT 1263725 Score = 178 bits (196), Expect = 3e-39 Identities = 169/216 (78%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 82596 CGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACCG 82655 |||| ||| | || || || |||||||| || ||||| ||||| || ||| | | ||| Sbjct 1264168 CGCAAAACAAGATGGAGGGTTGATTCTTTTTGAATATTGTAATCGGAAAGAGTACGACCA 1264109 Query 82656 TCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTTA 82715 ||||||| |||||||||||||||||| | ||| ||||| || ||||| || ||||| || Sbjct 1264108 TCTTCTAATTGTTTTCCAGCAAAGATCAATCTCTGTTGGTCAGGAGGAATACCTTCTTTG 1264049 Query 82716 TCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTTATC 82775 |||||||| || ||||| ||||||||||| ||||| || ||| ||||| ||||| || Sbjct 1264048 TCTTGAATTTTAGCTTTCACATTTTCAATAGTATCGGAAGCTTCAACTTCTAAAGTAATA 1263989 Query 82776 GTCTTGCCTGTCAACGTCTTTACAAATATCTGCATT 82811 ||||| ||||| | || || || || || |||||| Sbjct 1263988 GTCTTTCCTGTAAGAGTTTTGACGAAAATTTGCATT 1263953 Score = 178 bits (196), Expect = 3e-39 Identities = 176/228 (77%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 82583 ACCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGA 82642 ||| |||| | ||| || || | ||| ||||| |||||||| || ||||| ||||| || Sbjct 1264409 ACCACCTCGGAGACGAAGTACAAGGTGAAGAGTCGATTCTTTTTGAATATTGTAATCGGA 1264350 Query 82643 TAGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGG 82702 || | | || ||||| | |||||||||||||||||| | ||| |||||||| ||||| Sbjct 1264349 AAGTGTACGTCCATCTTCCAATTGTTTTCCAGCAAAGATCAATCTCTGTTGATCAGGAGG 1264290 Query 82703 TATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTAC 82762 || ||||| || |||||||| |||||||||||||||||||| |||||| || ||| || Sbjct 1264289 AATACCTTCTTTGTCTTGAATTTTTGCTTTTACATTTTCAATGGTATCAGAAGCTTCAAC 1264230 Query 82763 TTCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810 ||| | ||| || || || || || | || || || || || ||||| Sbjct 1264229 TTCAAGAGTAATAGTTTTTCCGGTAAGAGTTTTAACGAAAATTTGCAT 1264182 Score = 156 bits (172), Expect = 8e-33 Identities = 157/204 (77%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 82608 TGCAGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACCGTCTTCTAGTTGT 82667 || || ||||||||||| || ||||| ||||| || ||| | | || ||||| | ||| Sbjct 1263244 TGAAGTGTAGATTCTTTTTGAATATTGTAATCGGAAAGAGTACGGCCATCTTCCAACTGT 1263185 Query 82668 TTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTTATCTTGAATCTTT 82727 || || |||||||| | ||| |||||||| ||||| || ||||| ||||| ||||| || Sbjct 1263184 TTACCGGCAAAGATCAATCTCTGTTGATCAGGAGGAATACCTTCTTTATCCTGAATTTTA 1263125 Query 82728 GCTTTTACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTTATCGTCTTGCCTGTC 82787 ||||| ||||||||||| ||||| || ||| ||||| ||||| || || || || || Sbjct 1263124 GCTTTAACATTTTCAATGGTATCTGAAGCTTCAACTTCTAAAGTAATAGTTTTTCCAGTG 1263065 Query 82788 AACGTCTTTACAAATATCTGCATT 82811 | || || ||||| || |||||| Sbjct 1263064 AGTGTTTTGACAAAAATTTGCATT 1263041 >seq2209 Length=4115427 Score = 215 bits (238), Expect = 1e-50 Identities = 173/209 (83%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 82602 ACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACCGTCTTCT 82661 |||||||| || |||||||||||||| ||||||||||| || ||| |||| || |||||| Sbjct 648218 ACTAAGTGAAGTGTAGATTCTTTCTGAATATTATAATCTGAAAGAGTTCTTCCATCTTCT 648277 Query 82662 AGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTTATCTTGA 82721 |||||||| ||||||||||||| | ||||||||||||||| |||||||| ||||||||| Sbjct 648278 AGTTGTTTACCAGCAAAGATTAAACGTTGTTGATCTGGAGGAATTCCTTCTTTATCTTGA 648337 Query 82722 ATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTTATCGTCTTG 82781 ||||| ||||| |||||||| || || || || ||| ||||| || || || |||||| Sbjct 648338 ATCTTAGCTTTAACATTTTCTATTGTGTCTGAAGCTTCAACTTCTAAGGTAATGGTCTTG 648397 Query 82782 CCTGTCAACGTCTTTACAAATATCTGCAT 82810 || || | || || ||||| || ||||| Sbjct 648398 CCAGTGAGAGTTTTGACAAAGATTTGCAT 648426 Score = 199 bits (220), Expect = 8e-46 Identities = 184/233 (79%), Gaps = 0/233 (0%) Strand=Plus/Plus Query 82584 CCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGAT 82643 ||||||| | | || |||| || |||||||| |||||||| ||||||||||| || Sbjct 648656 CCTCCTCGAAGTCTCAATACTAGATGAAGAGTAGACTCTTTCTGAATATTATAATCTGAG 648715 Query 82644 AGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGT 82703 || ||||||| ||||| |||||||| |||||||| || | | |||||||||||| || Sbjct 648716 AGTGTTCTACCATCTTCAAGTTGTTTGCCAGCAAAAATCAAACGTTGTTGATCTGGTGGA 648775 Query 82704 ATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACT 82763 ||||| || |||||||||||||| ||||||||||| || || || || || ||| ||| Sbjct 648776 ATTCCCTCTTTATCTTGAATCTTAGCTTTTACATTCTCTATTGTGTCTGAAGCTTCAACT 648835 Query 82764 TCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCATTATTAT 82816 || || || || || || ||||| || ||||| ||||| ||||||||| |||| Sbjct 648836 TCTAAGGTGATGGTTTTTCCTGTTAAAGTCTTAACAAAGATCTGCATTTTTAT 648888 Score = 194 bits (214), Expect = 3e-44 Identities = 179/227 (79%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 82584 CCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGAT 82643 ||||||| | | || |||| || |||||||| |||||||| ||||||||||| || Sbjct 663621 CCTCCTCGAAGTCTCAATACTAGATGAAGAGTAGACTCTTTCTGAATATTATAATCTGAG 663680 Query 82644 AGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGT 82703 || ||||||| ||||| |||||||| ||||||||||| | || ||| ||||| ||||| Sbjct 663681 AGTGTTCTACCATCTTCAAGTTGTTTGCCAGCAAAGATCAATCGTTGCTGATCAGGAGGA 663740 Query 82704 ATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACT 82763 |||||||| |||||||||||||| ||||| ||||| || || ||||| || ||| ||| Sbjct 663741 ATTCCTTCTTTATCTTGAATCTTAGCTTTAACATTCTCTATTGTATCTGAAGCTTCAACT 663800 Query 82764 TCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810 || || || || |||||||| || | || || ||||| || ||||| Sbjct 663801 TCTAAGGTAATGGTCTTGCCAGTGAGAGTTTTGACAAAAATTTGCAT 663847 Score = 190 bits (210), Expect = 4e-43 Identities = 180/230 (78%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 82582 TACCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAG 82641 |||||||||| | | || ||||| || || |||||||| || || ||||||||||| | Sbjct 663847 TACCTCCTCTAAGTCTCAACACTAAATGGAGTGTAGATTCCTTTTGGATATTATAATCTG 663906 Query 82642 ATAGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAG 82701 | || ||||||| ||||| |||||||| |||||||| || | || |||||||||||| | Sbjct 663907 AGAGTGTTCTACCATCTTCAAGTTGTTTGCCAGCAAAAATCAATCGTTGTTGATCTGGTG 663966 Query 82702 GTATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTA 82761 | |||||||| |||||||||||||| || |||||||| || || ||||| || ||| | Sbjct 663967 GAATTCCTTCTTTATCTTGAATCTTAGCCTTTACATTCTCTATAGTATCTGAAGCTTCAA 664026 Query 82762 CTTCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCATT 82811 |||| | ||| || || || || || | || || ||||| || |||||| Sbjct 664027 CTTCAAGAGTGATGGTTTTTCCAGTGAGAGTTTTGACAAAGATTTGCATT 664076 Score = 179 bits (198), Expect = 7e-40 Identities = 162/204 (79%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 82608 TGCAGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACCGTCTTCTAGTTGT 82667 || |||||||||||||| || ||||| ||||| || || |||| || ||||| |||||| Sbjct 664101 TGAAGAGTAGATTCTTTTTGAATATTGTAATCTGAGAGTGTTCTTCCATCTTCAAGTTGT 664160 Query 82668 TTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTTATCTTGAATCTTT 82727 |||||||||||||| | || ||| ||||| ||||| |||||||| |||||||||||||| Sbjct 664161 TTTCCAGCAAAGATCAATCGTTGCTGATCGGGAGGAATTCCTTCTTTATCTTGAATCTTA 664220 Query 82728 GCTTTTACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTTATCGTCTTGCCTGTC 82787 || |||||||| || || ||||| || ||| ||||| | ||| || || || || || Sbjct 664221 GCCTTTACATTCTCTATAGTATCTGAAGCTTCAACTTCAAGAGTGATGGTTTTTCCAGTG 664280 Query 82788 AACGTCTTTACAAATATCTGCATT 82811 | || || ||||| || |||||| Sbjct 664281 AGAGTTTTGACAAAGATTTGCATT 664304 Score = 172 bits (190), Expect = 1e-37 Identities = 175/228 (77%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 82584 CCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGAT 82643 ||||||| | | || || ||||||| |||||||||||||| ||||| ||||| | Sbjct 663393 CCTCCTCGAAGTCTCAATACCAAGTGCAATGTAGATTCTTTCTGAATATTGTAATCTAAG 663452 Query 82644 AGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGT 82703 || | || || ||||| ||||||||||||||||| || | || ||| ||||| ||||| Sbjct 663453 AGTGTCCTTCCATCTTCAAGTTGTTTTCCAGCAAAAATCAATCGTTGCTGATCAGGAGGA 663512 Query 82704 ATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACT 82763 |||||||| |||||||||||||| || ||||| ||||| || ||||| || ||| ||| Sbjct 663513 ATTCCTTCTTTATCTTGAATCTTAGCCTTTACGTTTTCTATTGTATCCGAAGCTTCAACT 663572 Query 82764 TCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCATT 82811 || | || || ||||| || || | || || ||||| || |||||| Sbjct 663573 TCAAGTGTAATAGTCTTTCCAGTAAGAGTTTTGACAAAAATTTGCATT 663620 Score = 163 bits (180), Expect = 6e-35 Identities = 174/230 (76%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 82582 TACCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAG 82641 |||||||||| | | || ||||| || || |||||||| || || ||||||||||| | Sbjct 648426 TACCTCCTCTAAGTCTCAATACTAAATGGAGTGTAGATTCCTTTTGAATATTATAATCTG 648485 Query 82642 ATAGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAG 82701 | ||| |||| || |||||||| ||||| |||||||| || | | ||| || || |||| Sbjct 648486 AGAGAGTTCTTCCATCTTCTAGCTGTTTACCAGCAAAAATCAAACGTTGCTGGTCAGGAG 648545 Query 82702 GTATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTA 82761 | |||||||| || || |||||||| || ||||||||||| || || || || ||| | Sbjct 648546 GAATTCCTTCTTTGTCCTGAATCTTAGCCTTTACATTTTCTATTGTGTCTGAAGCTTCAA 648605 Query 82762 CTTCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCATT 82811 |||| | || || || || || || | || || ||||| || |||||| Sbjct 648606 CTTCAAGTGTGATAGTTTTCCCAGTAAGAGTTTTGACAAAAATTTGCATT 648655 >seq2021 Length=1035722 Score = 158 bits (174), Expect = 2e-33 Identities = 149/190 (78%), Gaps = 0/190 (0%) Strand=Plus/Plus Query 82621 CTTTCTGTATATTATAATCAGATAGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGA 82680 |||| || |||||||| || |||| | | | || ||||||| ||| ||||||||||| | Sbjct 239203 CTTTTTGAATATTATAGTCCGATAAAGTACGTCCATCTTCTAATTGCTTTCCAGCAAAAA 239262 Query 82681 TTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTT 82740 | || | ||| ||||| || ||||||||||| ||||| ||||| || ||||| ||||||| Sbjct 239263 TAAGACGTTGCTGATCAGGTGGTATTCCTTCTTTATCCTGAATTTTAGCTTTCACATTTT 239322 Query 82741 CAATCGTATCATTAGGTTCTACTTCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAA 82800 | || ||||| | ||||||||| | ||| || || || || ||||| || || |||| Sbjct 239323 CTATAGTATCTGATGCTTCTACTTCAAGAGTGATAGTTTTACCCGTCAAAGTTTTCACAA 239382 Query 82801 ATATCTGCAT 82810 |||||||||| Sbjct 239383 ATATCTGCAT 239392 >seq1112 Length=5701942 Score = 123 bits (136), Expect = 5e-23 Identities = 279/415 (67%), Gaps = 11/415 (3%) Strand=Plus/Minus Query 143783 TAGAATAAAAATACTGATAGGTATAACTGGCAGCGTAGCTACCGTTAAGTTACCTAATCT 143842 || || ||| || |||| ||| ||||| || || || || |||| ||||| | | Sbjct 3493426 TAAAAAAAAGATTTTGATTGGTTGTACTGGTAGTGTTGCAACAATTAAATTACCACAATT 3493367 Query 143843 AGTAAAAGAATTAACTCGTTTAGAAAATATAGAATTAAGAATAGTCGCTACAGAAAATGC 143902 |||| | ||||| ||| | || | ||| | |||||||| | || ||||| || Sbjct 3493366 AGTAGATAAATTATGGCGTA---ATAACTTTGAAGTGAGAATAGTAGTCACTGAAAAAGC 3493310 Query 143903 TATGAAATTT---ACAGACCAAAAAA---CTATAGGTATTCCTATTTATACAGATAAAGA 143956 || | | ||| | ||| | || || ||| |||| ||| | |||| || Sbjct 3493309 TAAGCATTTTTTGAAAGAGGCAGAACTGCCTCCAGGAATTCAAGTTTTATCTGATACAGT 3493250 Query 143957 TGAGTGGACTACTTGGaaaaaaaTACCCGATCCAGTCTTGCATATAGAACTTAG-GAGAT 144015 || ||| || ||||| || | | | ||||| || |||||||| || |||| || || Sbjct 3493249 GGAATGGGCTGCTTGGCAAGACAGAGGTGATCCTGTATTGCATATTGAT-TTAGTGAAAT 3493191 Query 144016 GGGCTGATGTTTTTATTATAGCGCCCTTAACAGCAAATACGTTAGCAAAAATAGCCAATG 144075 |||| ||| | ||| | || || || ||| || ||||| | | |||||||| | || Sbjct 3493190 GGGCCGATTTATTTTTAATTGCTCCATTAGATGCTAATACTCTTGGCAAAATAGCTAGTG 3493131 Query 144076 GTATATGCGATAATTTACTAACATCTATAGTAAGAGCCTGGGATATAAATAAACCTCTTA 144135 ||||||| |||||| || |||| | | | | | | ||||||||| | || ||| | Sbjct 3493130 GTATATGTGATAATATATTAACTTGTGTTGCACGTGCCTGGGATCCATTAAAGCCTTTGG 3493071 Query 144136 TTTTTTGCCCCGCTATGAATACCCTTATGTGGGAACATCCTATTACAGAAAAACA 144190 | ||||| || || |||||||| ||||||||||||||| |||| | || ||| Sbjct 3493070 TCTTTTGTCCTGCCATGAATACAAAAATGTGGGAACATCCTGTTACTGCAACACA 3493016 >seq2420 Length=677074 Score = 116 bits (128), Expect = 7e-21 Identities = 102/127 (80%), Gaps = 0/127 (0%) Strand=Plus/Minus Query 82583 ACCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGA 82642 ||| || || ||||| || || || || | |||||||| ||||| ||||||||||| || Sbjct 459228 ACCACCCCTTAAACGTAGCACCAAATGTAATGTAGATTCCTTCTGAATATTATAATCTGA 459169 Query 82643 TAGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGG 82702 || | ||||| ||||| | |||||||||||||||||||| |||||||||| | || || Sbjct 459168 AAGTGTCCTACCATCTTCCAATTGTTTTCCAGCAAAGATTAATCTTTGTTGACCAGGTGG 459109 Query 82703 TATTCCT 82709 |||||| Sbjct 459108 AATTCCT 459102 Score = 104 bits (114), Expect = 5e-17 Identities = 91/112 (81%), Gaps = 1/112 (1%) Strand=Plus/Minus Query 82703 TATT-CCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTA 82761 |||| ||||| ||||||||||| |||||||| ||||||||||| ||||| | ||| | Sbjct 459051 TATTACCTTCTTTATCTTGAATTTTTGCTTTAACATTTTCAATGGTATCTGATGCTTCAA 458992 Query 82762 CTTCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCATTAT 82813 |||| | ||| || |||||||| || | ||||| |||||||||||||| || Sbjct 458991 CTTCAAGAGTAATAGTCTTGCCAGTTAGAGTCTTCACAAATATCTGCATGAT 458940 >seq546 Length=368327 Score = 113 bits (124), Expect = 9e-20 Identities = 98/122 (80%), Gaps = 0/122 (0%) Strand=Plus/Plus Query 198514 TAGGTTGTATGTGGTCTATTTGCGGATTACATGATCGAGCGTGGAAAGAAAGACCTATAT 198573 |||||||||||||||||||||| || | ||||||| | ||| ||||||| ||||| Sbjct 22750 TAGGTTGTATGTGGTCTATTTGTGGTGTCCATGATCATGGTTGGCCAGAAAGAGATATAT 22809 Query 198574 TTGGGAAGATAAGATATATGAATTATGAGGGTTCTAAGAAAAAATTTGATGTTGCTGCAT 198633 |||| || || ||||||||||||||||| |||| ||| ||||||| | |||||| || Sbjct 22810 TTGGAAAAATTAGATATATGAATTATGAAGGTTGTAAACGAAAATTTAACATTGCTGAAT 22869 Query 198634 TT 198635 || Sbjct 22870 TT 22871 Score = 109 bits (120), Expect = 1e-18 Identities = 165/235 (70%), Gaps = 0/235 (0%) Strand=Plus/Plus Query 198285 AGAAAGTATATCTATTCTATTAAACAACTCGAAAAGGCGGAAACACATGACCCTCTATGG 198344 ||||| ||||| |||| | | || || | ||||| | ||||| ||||| | | ||| Sbjct 22397 AGAAAATATATATATTTTTTAAATCATTTGGAAAATTCAGAAACTCATGATGATTTGTGG 22456 Query 198345 AATGCATCGCAAATACAGATGATAAGAGAAGGAAAAATGCATAGTTTTTTAAGAATGTAC 198404 ||||||| |||| || ||| ||| | |||||| |||||| | |||||||||||||| Sbjct 22457 AATGCATGTCAAAATCAAATGGTAACAATAGGAAAGATGCATGGATTTTTAAGAATGTAT 22516 Query 198405 TGGGCTAAAAAGATACTTGAATGGACAAGAACACCGGAAGACGCTTTGAGTTATAGTATC 198464 ||||| || || ||| | |||||||| ||| || ||| ||||| | | | Sbjct 22517 TGGGCAAAGAAAATATTAGAATGGACTGAAACTCCTGAAATTGCTTTAAAATGGGCCAAT 22576 Query 198465 TATCTAAACAATAAGTACGAACTAGACGGCACGGATCCTAACGGATACGTAGGTT 198519 ||| |||| ||||| || |||| || |||||||| || || ||||||| Sbjct 22577 TATTTAAATAATAAATATAGTATAGATGGTTGTGATCCTAATGGTTATGTAGGTT 22631 >seq80 Length=609990 Score = 86.0 bits (94), Expect = 1e-11 Identities = 100/135 (74%), Gaps = 0/135 (0%) Strand=Plus/Plus Query 83098 ACATGGTGTTTATATTTATGTAGAGCTTGTCTAGCTTTAGTTACTAACATATTTTTATCG 83157 |||| |||||||||||||| || || | ||| ||||| | | || | ||| | || Sbjct 519340 ACATTGTGTTTATATTTATTTAATGCATCTCTTGCTTTTGAAATTAGAAGATTGTCCTCA 519399 Query 83158 GTTTCTAATTTGAATGATACTACAAAAGCATTTGGACACCATTCATCTACTAAATGAAAT 83217 |||||||||||||| ||||| |||||||| | |||| |||| | ||| | | || | Sbjct 519400 GTTTCTAATTTGAAAGATACCACAAAAGCTTCTGGAACCCATAAACTTACAAGAGGAGCT 519459 Query 83218 AACATTTTAGGTACT 83232 || ||||| |||||| Sbjct 519460 AAGATTTTTGGTACT 519474 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 981796618844109