Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Apis_20cerana_20[refseq_20GCF_5F001442555.1_202015-11-12] 2,431 sequences; 228,331,812 total letters Query= NC_025462.1 Length=99730 Score E Sequences producing significant alignments: (Bits) Value seq3 89.7 3e-13 >seq3 Length=676877 Score = 89.7 bits (98), Expect = 3e-13 Identities = 111/152 (73%), Gaps = 0/152 (0%) Strand=Plus/Minus Query 19970 TGGAATCCTCATGATGTTGCAGATGTAGATTTACCACCTTGCCATACACTATTTCAATTC 20029 |||||||| |||| || || | | | |||||| ||||| ||| | ||||||| Sbjct 624436 TGGAATCCAATTGATATTCCAAAAATGGCTTTACCTCCTTGTCATTGTTTCGTTCAATTT 624377 Query 20030 TTTGTGAAAGATGGTAAATTATCTTGCCAGTTGTATCAACGAAGTGCTGACTTATTACTT 20089 | ||| | ||| ||||||| ||||| | |||||| ||||||| || | ||| Sbjct 624376 TATGTAAGCAATGAAGAATTATCATGCCAACTTTATCAAAGAAGTGCGGATATGGGTCTT 624317 Query 20090 GGTGTTCCATTTAATATTGCATCTTATGCTTT 20121 ||||| ||||||||||||||||||||| |||| Sbjct 624316 GGTGTACCATTTAATATTGCATCTTATTCTTT 624285 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 319001748395981