Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Apis_20cerana_20[refseq_20GCF_5F001442555.1_202015-11-12] 2,431 sequences; 228,331,812 total letters Query= NC_027335.1 Length=145518 Score E Sequences producing significant alignments: (Bits) Value seq2171 96.9 3e-15 >seq2171 Length=7937 Score = 96.9 bits (106), Expect = 3e-15 Identities = 122/168 (73%), Gaps = 0/168 (0%) Strand=Plus/Plus Query 89552 CCATGAGCCATAGCGACCTGCTACATACTCATCAGCTACTCGTTCTTGGTTGGCAGGTGA 89611 ||| |||||||| | | | ||||||| | ||||| ||||| || || |||||||| Sbjct 3179 CCAAGAGCCATACCTGTCAGACACATACTTACTTGCTACACGTTCCTGATTAGCAGGTGA 3238 Query 89612 ATAGTCACCATTTAAATAAGAGGCAGATAATTGGTAACGACCAATATACTGACCATTTGT 89671 |||||||| |||||||| || | || || | || ||||| | || ||| Sbjct 3239 GTAGTCACCGTTTAAATATGATTCGTCCAACTGAAATTTTCCGATATATTTCCCGTTTTG 3298 Query 89672 TGCATCATAAGAACCACTAGATTCACGTTGTGCAATCCACTCTTTTGC 89719 |||| ||| ||||||| |||||||||||||||||||| ||||| || Sbjct 3299 TGCAGTATATGAACCACCTGATTCACGTTGTGCAATCCATTCTTTAGC 3346 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 465515453719280