Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Apis_20cerana_20[refseq_20GCF_5F001442555.1_202015-11-12] 2,431 sequences; 228,331,812 total letters Query= NC_028091.1 Length=196300 Score E Sequences producing significant alignments: (Bits) Value seq69 84.2 3e-11 >seq69 Length=621926 Score = 84.2 bits (92), Expect = 3e-11 Identities = 85/111 (77%), Gaps = 0/111 (0%) Strand=Plus/Minus Query 110680 AAACTCACCTGCGAGGGTTCTTCTCAGGTAGATGTTTGTTGTGTATGGTTCAAAGCATTC 110739 |||||| |||| || |||||| |||||| || | ||||||||||| | |||| Sbjct 549357 AAACTCTCCTGACAGTACTCTTCTTGTGTAGATATTGCTGGTGTATGGTTCTATAGATTC 549298 Query 110740 ATTATTACCCAAGATTTGTGCGGTGGAGGCTGTTGGCATTGGTGCCATCAA 110790 |||||| || || |||||||| || || ||||||||||| ||||| || || Sbjct 549297 ATTATTTCCTAAAATTTGTGCCGTTGATGCTGTTGGCATAGGTGCAATTAA 549247 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 628012915677600