Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Apis_20cerana_20[refseq_20GCF_5F001442555.1_202015-11-12] 2,431 sequences; 228,331,812 total letters Query= NC_029009.1 Length=147589 Score E Sequences producing significant alignments: (Bits) Value seq2171 82.4 7e-11 >seq2171 Length=7937 Score = 82.4 bits (90), Expect = 7e-11 Identities = 99/135 (73%), Gaps = 0/135 (0%) Strand=Plus/Minus Query 62618 GCAAAAGAATGGATTGCACAAAAAGAATCTAGCGGTTCTTACTCAGCAACTAACGGACGT 62677 || |||||||||||||||||| ||||| | ||||| || | ||| ||||| Sbjct 3346 GCTAAAGAATGGATTGCACAACGTGAATCAGGTGGTTCATATACTGCACAAAACGGGAAA 3287 Query 62678 TACATTGGACGTTACCAATTAGATGCTTCATACTTAAACGGTGACTACTCACCAGAAAAC 62737 || || ||| | || || || | ||||| |||||||||||||||||||| | || Sbjct 3286 TATATCGGAAAATTTCAGTTGGACGAATCATATTTAAACGGTGACTACTCACCTGCTAAT 3227 Query 62738 CAAGAACGTGTAGCA 62752 || |||||||||||| Sbjct 3226 CAGGAACGTGTAGCA 3212 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 472142452335240