Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Apis_20cerana_20[refseq_20GCF_5F001442555.1_202015-11-12] 2,431 sequences; 228,331,812 total letters Query= NC_029026.1 Length=130952 Score E Sequences producing significant alignments: (Bits) Value seq2171 91.5 1e-13 >seq2171 Length=7937 Score = 91.5 bits (100), Expect = 1e-13 Identities = 121/168 (72%), Gaps = 0/168 (0%) Strand=Plus/Plus Query 121835 CCATGAGCCATAGCGACCTGCTACATACTCATCAGCTACTCGTTCTTGGTTGGCAGGTGA 121894 ||| |||||||| | | | ||||||| | ||||| ||||| || || |||||||| Sbjct 3179 CCAAGAGCCATACCTGTCAGACACATACTTACTTGCTACACGTTCCTGATTAGCAGGTGA 3238 Query 121895 ATAGTCACCATTTAAATAAGAGGCAGATAGTTGGTAACGACCAATATACTGACCATTTGT 121954 |||||||| |||||||| || | | || | || ||||| | || ||| Sbjct 3239 GTAGTCACCGTTTAAATATGATTCGTCCAACTGAAATTTTCCGATATATTTCCCGTTTTG 3298 Query 121955 TGCATCATAAGAACCACTAGATTCACGTTGTGCAATCCACTCTTTTGC 122002 |||| ||| ||||||| |||||||||||||||||||| ||||| || Sbjct 3299 TGCAGTATATGAACCACCTGATTCACGTTGTGCAATCCATTCTTTAGC 3346 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 418909188269383