Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Apis_20dorsata_20[refseq_20GCF_5F000469605.1_202013-09-24] 4,040 sequences; 230,340,171 total letters Query= NC_001132.2 Length=161773 Score E Sequences producing significant alignments: (Bits) Value seq50 116 4e-21 >seq50 Length=3512070 Score = 116 bits (128), Expect = 4e-21 Identities = 144/197 (73%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 16792 TAATCTATCCGCTACAAATTCTATATATTGGCACATTAATTCGCAGTTCATTCCTATAAG 16851 ||||||||| || |||||||| |||||||| ||||| | || |||||||| ||||| | Sbjct 995819 TAATCTATCTGCAACAAATTCGATATATTGACACATAAGTTTACAGTTCATGCCTATCAT 995878 Query 16852 ACGTACCGGAAGAGCTTCCGTCAAAAATCGTTGCTCTATAACAACCGCTTCCTTAATAAT 16911 || || | || || ||||||||| ||| || || || || ||||||||||| Sbjct 995879 TTCAACAGGTAATGCATCTGTCAAAAATTCTTGTTCAATTTTGACAGCATCCTTAATAAT 995938 Query 16912 ACTAGCAACTCGTTCCTCGGACGGTGTATGTTTAAGATGTTTAAACATCAGACATGCGAA 16971 | |||||||| || ||| | ||| || ||||| ||||| | |||||| || Sbjct 995939 TGATGTGACTCGTTCAGAAGATGGTTTTTGTACAATGTGTTTGAACATTAAACATGCAAA 995998 Query 16972 ATCGCAATGTAATCCCT 16988 ||| ||||||||||||| Sbjct 995999 ATCACAATGTAATCCCT 996015 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 517519463947200