Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Apis_20dorsata_20[refseq_20GCF_5F000469605.1_202013-09-24] 4,040 sequences; 230,340,171 total letters Query= NC_001993.1 Length=236120 Score E Sequences producing significant alignments: (Bits) Value seq348 210 3e-49 seq108 179 6e-40 seq4 163 4e-35 seq31 154 2e-32 seq2544 152 8e-32 seq87 145 1e-29 seq1683 141 1e-28 seq65 118 2e-21 seq83 86.0 9e-12 >seq348 Length=983679 Score = 210 bits (232), Expect = 3e-49 Identities = 384/553 (69%), Gaps = 11/553 (2%) Strand=Plus/Plus Query 203113 ATGTTCATTTAGTGTTTTTATTGCCCAATTATTAGCACCATTTATATTATCGTAATTTTC 203172 ||| | ||||| ||||| ||| |||||| || ||||| | || ||| || ||||| Sbjct 639974 ATGCTTATTTAATGTTTCTATAGCCCAAGGATAGGCACCTTCAATCAGATCATATTTTTC 640033 Query 203173 ATTATAATAACAAAAATTATCACATAGTTCTTTACGAATAATAGCTTCTT-CACAAAAAA 203231 ||||||| | ||||||||||||| |||||||| | |||||||||||||| || ||| | Sbjct 640034 ATTATAAAAGCAAAAATTATCACTAAGTTCTTTTCTAATAATAGCTTCTTCCATAAAGGA 640093 Query 203232 CTTCTACCGATTTAGGATATAATTTTTTATATTTGTTAATTTCTAATATTATTCTTTGAG 203291 | || || || || ||||||||||||||| | || ||||| || || | ||| Sbjct 640094 C-TCAACTGACTTTTTATATAATTTTTTATACTCTTTTATTTCCAAAATACAACGTTGTA 640152 Query 203292 TTGAAATTTGACCAAAATGTATCCATGGTGATAAATTACTTATTGCATTAGCATTTGGAT 203351 ||| || |||||||| | ||| ||||||||||| || || ||||| | |||| Sbjct 640153 CTGAGATCATGCCAAAATGAAACCAGGGTGATAAATTGCTGATGGCATTTGATAAAGGAT 640212 Query 203352 CATTTCtttttttagcataatcttttaatctattttgtataaatatatctaatattttaa 203411 ||| | || | |||| | || ||| | ||| |||| ||| | || | | |||| Sbjct 640213 TATTACGTTCATCTCCATATTTTTCTAAACGATTCTGTAAAAAATTTTCAAGTTCCTTAA 640272 Query 203412 atgcatattttGTA-CCAGATTTTGCCCAAGAAACAGGTTTAACATTTCTATCAATATTT 203470 ||| || | || || | || ||||| | || ||| || |||| | | | Sbjct 640273 TACCAT-TTCTATATCCTGGCTTAGCCCATGTAATTTCTTTTACTGACTTATCTACTTCT 640331 Query 203471 AATGATTGTTCTGCttttttccaattattattt----attttaatatatgtattataagt 203526 | |||| ||| ||||||||||||| ||| | ||| | | ||| |||| | Sbjct 640332 ATATTTTGTAAAGCTATTTTCCAATTATTTTTTTCAAACTTTTCT-TTTGTTATATATGG 640390 Query 203527 atgtttaataataggtataaattCAGTTAAATATTCTGATAATTTATAATTTATTTTATT 203586 |||||| |||| |||| |||||| |||||| |||| || ||| |||||||||||| Sbjct 640391 ATGTTTTATAACAGGTGGAAATTCTGTTAAAAATTCCTCTAGTTTTGTATTTATTTTATT 640450 Query 203587 TCTAATGGTTTTTGCAGAATATTC-TAATTTATTACTAGCAATCCAACATGGTACAATAT 203645 |||||| ||||| |||| | |||| | ||| | | ||| |||||| || ||||||| Sbjct 640451 TCTAATTGTTTTAGCAGCAAATTCTTGCTTTGATGAT-GCATACCAACAAGGCACAATAT 640509 Query 203646 TATGTGAATCAAC 203658 |||| | ||| || Sbjct 640510 TATGAGCATCTAC 640522 Score = 165 bits (182), Expect = 1e-35 Identities = 181/243 (74%), Gaps = 2/243 (1%) Strand=Plus/Plus Query 202868 CCAACATATCCATTTGGATCACGTCCATCTATAAAATATTTATCATTTAAATNNNNNNNN 202927 || ||||| ||||| ||||||| ||||||||| ||| |||| |||||||| Sbjct 639664 CCTACATAACCATTAGGATCACAACCATCTATACTATACTTATTATTTAAATAATTGGCC 639723 Query 202928 NNNNNNAATGCTTCTTCTGGTGATTTTGTCCATTCTAATAtttttttAGCCCAATACATT 202987 || || ||| || | || ||||||||||||||||| || |||||||||||| Sbjct 639724 CATTTTAAAGCAATTTCAGGAGTTTCAGTCCATTCTAATATTTTCTTTGCCCAATACATT 639783 Query 202988 CTTAAATATCCATGCAT-TTTACCATAGATAATCATTTGTTTTTGTGATGCATTCCATAA 203046 |||||| | |||||||| ||| | || | | | |||||| ||||| |||||||||| || Sbjct 639784 CTTAAAAACCCATGCATCTTTCCTATTG-TTACCATTTGATTTTGACATGCATTCCACAA 639842 Query 203047 ATTGTCATGAGTTAATGCATTTTCAAGTTGATATAAACTATATATATGTTTTCTAGTATC 203106 || ||||||||| || |||||| | |||| |||| |||||||| |||||| |||| Sbjct 639843 ATCATCATGAGTTTCTGAATTTTCCAAATGATTTAAAAAATATATATATTTTCTTTTATC 639902 Query 203107 ATT 203109 || Sbjct 639903 TTT 639905 Score = 134 bits (148), Expect = 2e-26 Identities = 198/273 (73%), Gaps = 7/273 (3%) Strand=Plus/Plus Query 203714 ATTTTAATAGGATAAAAATCAACAATCAATACACCAATATTATAtttttttATAAATTTT 203773 |||||||| ||||||||||| ||| | | || ||||||||| ||||||||||||| Sbjct 640652 ATTTTAAT-GGATAAAAATCTGTAATAACAGCTCCCATATTATATATTTTTATAAATTTA 640710 Query 203774 GGTAATACATCTACTGATATTCCTATC-AATAGATGAAAATGTATATTTAAATTTTTACA 203832 | ||||| | || | | | || || |||||||||| ||||||||| |||||||| Sbjct 640711 AG-AATACTTATATTTGGTTCACCATGTAAAAGATGAAAATTTATATTTAATTTTTTACA 640769 Query 203833 TTCTTCTTCCATTTGTTTAACACCATTCAACATAAAATCAAATTGTCTAATTGTAGCATT 203892 ||||| ||| |||| || | || |||| | ||| | | | | ||| || | |||||| Sbjct 640770 TTCTTTTTCAATTTCTTCTAATCCTTTCAGAAGAAATTTATAATATCTTATAGAAGCATT 640829 Query 203893 AAGAAATTCTGGTACTAAACATATACACATATGTAATG--ACGATTTTGATTTTAATGCT 203950 |||||| | || | || || | ||| ||||| | || || ||| | |||||| ||| Sbjct 640830 AAGAAAATTTGACATTATGCAAAAACATATATGAAGTGGTAC-ATTAT-TTTTTAAAGCT 640887 Query 203951 AATTCTTGTGCATAAATTAAACCCCAATTATCT 203983 || ||| ||| ||| ||| ||||||||||| Sbjct 640888 GTTTTTTGAGCAAAAAGTAATGCCCAATTATCT 640920 Score = 104 bits (114), Expect = 4e-17 Identities = 101/130 (78%), Gaps = 0/130 (0%) Strand=Plus/Plus Query 202740 ATTTTTTAATAAATAAATCAACATCAAATTTACGTCTACATCCTTCATAACTCATATATC 202799 |||| ||| |||| | ||| | |||||| ||| |||| ||||||||| ||||||||| Sbjct 639436 ATTTCATAACAAATTCAGCAATGTTAAATTTTCGTTTACAACCTTCATAATTCATATATC 639495 Query 202800 TAATTTTACCAAATATTGGTCTTTCTTTCCATGCTCTATCATGAATACCACAAATTGACC 202859 ||||||| |||||||| ||||||| ||| | |||||| | |||||| || |||| Sbjct 639496 TAATTTTTCCAAATATATCTCTTTCTGGCCAACCATGATCATGGACACCACAGATAGACC 639555 Query 202860 ACATACATCC 202869 ||||||| || Sbjct 639556 ACATACAACC 639565 >seq108 Length=811940 Score = 179 bits (198), Expect = 6e-40 Identities = 183/239 (77%), Gaps = 0/239 (0%) Strand=Plus/Minus Query 124538 AATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAA 124597 ||||||||| ||| | || ||||| || || |||||||| ||| |||| ||||||| Sbjct 251193 AATGCAAATTTTTGTCAAAACACTTACTGGAAAAACTATTACTTTAGAAGTTGAAGCTTC 251134 Query 124598 TGATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCA 124657 ||||| ||| ||| | ||| |||||||| |||||||||||||| || || ||||| Sbjct 251133 AGATACCATTGAAAATGTTAAAGCTAAAATTCAGGATAAAGAAGGTATTCCTCCCGATCA 251074 Query 124658 ACAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAA 124717 ||| || | |||||||| ||||||||||| || ||| |||| ||| | |||||||| Sbjct 251073 ACAGAGATTGATTTTTGCTGGAAAACAATTGGAAGATGGTCGTACACTTTCTGATTATAA 251014 Query 124718 TATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGTATTAAAAATT 124776 ||||||||||||||| || | ||| | ||||| || | || |||||||| ||| || Sbjct 251013 TATTCAAAAAGAATCTACACTTCATCTTGTTTTGCGACTTCGTGGTGGTATGCAAATTT 250955 Score = 176 bits (194), Expect = 7e-39 Identities = 184/239 (77%), Gaps = 2/239 (1%) Strand=Plus/Minus Query 124539 ATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAAT 124598 |||||||| || | ||||| || ||||| |||||||| ||| |||| |||||||| Sbjct 250736 ATGCAAATTTTCGTTAAGACTCTTACAGGAAAAACTATTACTTTAGAAGTTGAAGCATCC 250677 Query 124599 GATACAATTTCTAAT-TTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCA 124657 ||||| ||| ||| |||| || |||||||| |||||||||||||| || || ||||| Sbjct 250676 GATACTATTGAAAATGTTAAGACT-AAAATTCAGGATAAAGAAGGTATTCCTCCCGATCA 250618 Query 124658 ACAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAA 124717 ||| || | |||||||| || ||||| | || ||| |||| ||| | |||||||| Sbjct 250617 ACAGAGATTGATTTTTGCTGGTAAACAGCTGGAAGATGGTCGTACACTTTCGGATTATAA 250558 Query 124718 TATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGTATTAAAAATT 124776 |||||||||||||||||| | ||||| || || ||||| ||||||| || ||| || Sbjct 250557 TATTCAAAAAGAATCAACACTACATTTAGTATTGCGTTTGAGAGGTGGAATGCAAATTT 250499 Score = 168 bits (186), Expect = 1e-36 Identities = 174/228 (76%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 124539 ATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAAT 124598 |||||||| ||| | ||||| || || || |||||||| ||| | || ||||||| Sbjct 249225 ATGCAAATTTTTGTCAAGACTCTCACGGGTAAAACTATTACTCTTGAAGTTGAAGCTTCC 249166 Query 124599 GATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCAA 124658 || |||||| ||| ||||| ||||||||||| ||||||||||| || ||||||||| Sbjct 249165 GACACAATTGAAAATGTAAAAGCAAAAATTCAAGACAAAGAAGGTATTCCTCCTGATCAA 249106 Query 124659 CAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAAT 124718 || || | || ||||| ||||||||||| || ||| | || ||| | ||||||||| Sbjct 249105 CAGAGATTGATCTTTGCTGGAAAACAATTGGAAGATGGACGTACACTTTCTGATTATAAT 249046 Query 124719 ATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGT 124766 |||||||||||||| ||| | || | || | ||| | ||||||||| Sbjct 249045 ATTCAAAAAGAATCGACTCTTCACCTTGTACTTCGTCTCCGAGGTGGT 248998 Score = 168 bits (186), Expect = 1e-36 Identities = 180/238 (76%), Gaps = 0/238 (0%) Strand=Plus/Minus Query 124539 ATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAAT 124598 ||||| || ||| | || ||| | ||||| ||||| |||||| | ||| | || || Sbjct 251420 ATGCAGATCTTTGTCAAAACATTGACAGGTAAAACAATAACTCTGGAGGTAGAGGCCTCA 251361 Query 124599 GATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCAA 124658 ||||| ||| ||| ||||| |||||||||||| || ||||| || ||||| ||||| Sbjct 251360 GATACCATTGAAAATGTAAAAGCGAAAATTCAAGACAAGGAAGGAATTCCACCAGATCAG 251301 Query 124659 CAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAAT 124718 ||||| | || ||||| || |||||| |||| ||| | || |||||| ||||||||| Sbjct 251300 CAAAGATTGATCTTTGCTGGTAAACAACTAGAAGATGGACGTACATTATCTGATTATAAT 251241 Query 124719 ATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGTATTAAAAATT 124776 ||||||||||| ||||| | ||||| || || ||||| ||||||| || ||| || Sbjct 251240 ATTCAAAAAGAGTCAACACTACATTTAGTATTGCGTTTGAGAGGTGGAATGCAAATTT 251183 Score = 163 bits (180), Expect = 4e-35 Identities = 179/238 (75%), Gaps = 0/238 (0%) Strand=Plus/Minus Query 124539 ATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAAT 124598 |||||||| ||| | ||||| || || || |||||||| ||| | || ||||||| || Sbjct 249453 ATGCAAATTTTTGTCAAGACTCTCACGGGTAAAACTATTACTCTTGAAGTTGAAGCTTAT 249394 Query 124599 GATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCAA 124658 ||| | ||| ||| ||||| ||||||||||| ||||||||||| || ||||| ||| Sbjct 249393 GATGCCATTGAAAATGTAAAAGCAAAAATTCAAGACAAAGAAGGTATTCCGCCTGACCAA 249334 Query 124659 CAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAAT 124718 || || || || ||||| || ||||| || || ||| |||| || | ||||||||| Sbjct 249333 CAGAGACTGATCTTTGCTGGTAAACAGTTGGAAGATGGTCGTACTCTTTCCGATTATAAT 249274 Query 124719 ATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGTATTAAAAATT 124776 || ||||||||||| || | ||| | ||||| || | || |||||||| ||| || Sbjct 249273 ATCCAAAAAGAATCTACACTTCATCTTGTTTTGCGACTTCGTGGTGGTATGCAAATTT 249216 Score = 145 bits (160), Expect = 1e-29 Identities = 175/238 (74%), Gaps = 0/238 (0%) Strand=Plus/Minus Query 124539 ATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAAT 124598 |||||||| || | || || || || || || ||||| ||| | || ||||||| Sbjct 250964 ATGCAAATTTTCGTCAAAACTCTTACGGGAAAGACTATTACTCTTGAAGTTGAAGCTTCC 250905 Query 124599 GATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCAA 124658 ||||| ||| ||| ||||| || |||||||| ||||||||||| || ||||| ||| Sbjct 250904 GATACCATTGAAAATGTAAAAGCCAAGATTCAAGACAAAGAAGGTATTCCTCCTGACCAA 250845 Query 124659 CAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAAT 124718 || || | || ||||| ||||||||||| || ||| | || || | ||||| ||| Sbjct 250844 CAGAGATTGATCTTTGCTGGAAAACAATTGGAAGATGGCCGTACTCTTTCCGATTACAAT 250785 Query 124719 ATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGTATTAAAAATT 124776 ||||||||||||||||| | ||| | ||| |||| | || |||||||| ||| || Sbjct 250784 ATTCAAAAAGAATCAACCCTCCATCTCGTTCTACGACTTCGTGGTGGTATGCAAATTT 250727 Score = 120 bits (132), Expect = 5e-22 Identities = 126/166 (76%), Gaps = 0/166 (0%) Strand=Plus/Minus Query 124611 AATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCAACAAAGGCTTATT 124670 ||| ||||| ||||||||||| ||||||||||| || ||||| ||||| || || || Sbjct 249609 AATGTAAAAGCAAAAATTCAAGACAAAGAAGGTATTCCGCCTGACCAACAGAGACTGATC 249550 Query 124671 TTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAATATTCAAAAAGAA 124730 ||||| || ||||| || || ||| |||| || | ||||| ||||||||||||||| Sbjct 249549 TTTGCTGGTAAACAGTTGGAAGATGGTCGTACTCTTTCCGATTACAATATTCAAAAAGAA 249490 Query 124731 TCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGTATTAAAAATT 124776 || || | ||| | ||||| || | || |||||||| ||| || Sbjct 249489 TCTACACTTCATCTTGTTTTGCGACTTCGTGGTGGTATGCAAATTT 249444 >seq4 Length=912327 Score = 163 bits (180), Expect = 4e-35 Identities = 195/263 (74%), Gaps = 5/263 (2%) Strand=Plus/Minus Query 205435 TTTAAATTAGTTAAATGTGCAATCATATAAGTCAATAAACTATAACTAGCAACATTAAAT 205494 ||||| || || | |||||| | |||||| | || ||| |||| |||| ||||||| Sbjct 867150 TTTAAGTTTGTAATATGTGCCAGTATATAAATTAACAAAGAATAAGATGCAATATTAAAT 867091 Query 205495 GGTACACCTAAACCCATATCAGCTGATCTTTGATACATTTGACATGTAAGATATTTATT- 205553 |||||||| | ||||||||| || ||||||||| | ||| |||| ||| || || Sbjct 867090 GGTACACCAAGACCCATATCCGCACTTCTTTGATAAAGTTGGCATG----ATAATTCTTC 867035 Query 205554 ATTAATTACATGAAATTGTACAAAACAATGACAAGGTGGTATAACCATATTTTCAACATC 205613 ||| |||||| |||||| ||||||||||||||||| |||| | |||| ||| || ||| Sbjct 867034 ATTGCTTACATAAAATTGAACAAAACAATGACAAGGAGGTAAAGCCATTTTTGGAATATC 866975 Query 205614 TATAGGATTCCAGGCTGTTAATATTATATTTCTAGATTCAGGtttattttttattttatt 205673 || |||||||| ||||| | ||| || ||||| | || || | ||| |||| Sbjct 866974 GATTGGATTCCATGCTGTCATTATAATTCTTCTATCATTGGGAGAATATCGTATCTTATC 866915 Query 205674 tatAATATGTGTTAATTGATCAA 205696 ||||| | | |||||||||||| Sbjct 866914 TATAACTTCTTTTAATTGATCAA 866892 Score = 156 bits (172), Expect = 6e-33 Identities = 199/272 (73%), Gaps = 3/272 (1%) Strand=Plus/Minus Query 205709 TATAATTTGTATCCATATCAATATATTTAGCACCAAAATGACGCCATTGAAAACCATAAA 205768 |||||| | | | |||||| ||||| | ||||||||||| | ||||||||| ||||||| Sbjct 866797 TATAATCTTTGTACATATCTTTATATGTTGCACCAAAATGTCTCCATTGAAATCCATAAA 866738 Query 205769 CTGGACCTAAATCACCTTCTTTTCTATCATTAAAACCACGtttttttatatattttaatg 205828 ||||||||||| ||||||| ||||| ||||||||| | || | | || Sbjct 866737 TAGGACCTAAATCTCCTTCTTCCCTATCTGTAAAACCACAAGAATCTAAGAACTCACGTG 866678 Query 205829 atccattttcatcccaaatatggattcctttattttttaGAATATTTGTATTAGTTGATC 205888 | | |||| ||||||||||||| | |||| | |||| | |||| ||| || |||| Sbjct 866677 AACTATTTGCATCCCAAATATGAACATCTTTTTCGCTTAGTTTCTTTGCATTTGTGGATC 866618 Query 205889 CAGATATAAACCATAATAATTCTTCAACAATTCCTCTCCAAAACATTGATTTTGTTGTAA 205948 | ||||||||||| ||||| || || | ||| ||||||| | |||||| || | Sbjct 866617 CTTTAATAAACCATAACAATTCCTCCACTACACCTTTCCAAAATACGCGTTTTGTAGTTA 866558 Query 205949 ATAATGGAAATGAATCATCTAAT--TTATATT 205978 ||||||||||| ||| | |||| ||||||| Sbjct 866557 ATAATGGAAATATATC-TATAATAATTATATT 866527 >seq31 Length=1439309 Score = 154 bits (170), Expect = 2e-32 Identities = 157/205 (77%), Gaps = 0/205 (0%) Strand=Plus/Minus Query 124538 AATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAA 124597 |||||| || ||| | ||||| ||||||| |||||||| || |||| ||||||| Sbjct 964983 AATGCAGATCTTTGTTAAGACTTTAACAGGAAAAACTATCACCTTAGAAGTTGAAGCTTC 964924 Query 124598 TGATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCA 124657 || ||||| ||| |||| || |||||||||||||| || || ||||| ||||| Sbjct 964923 AGACACAATAGAGAATGTAAAGGCTAAGATTCAAGATAAAGAGGGAATTCCACCAGATCA 964864 Query 124658 ACAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAA 124717 |||| | | |||||||| ||||||||| | || ||| || ||||| | ||||||||| Sbjct 964863 ACAACGTTTGATTTTTGCTGGAAAACAACTTGAAGATGGTAGAACACTCTCAGATTATAA 964804 Query 124718 TATTCAAAAAGAATCAACTTTGCAT 124742 ||||||||||||||| ||| | ||| Sbjct 964803 TATTCAAAAAGAATCTACTCTTCAT 964779 Score = 145 bits (160), Expect = 1e-29 Identities = 170/230 (74%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 124539 ATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAAT 124598 ||||| || ||| | || || ||||| || ||||| || ||| | || ||||||| Sbjct 961734 ATGCAGATTTTTGTTAAAACCCTAACTGGAAAAACCATCACTCTTGAAGTTGAAGCTTCA 961675 Query 124599 GATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCAA 124658 |||||||| ||| |||| || ||||||||||||||||| || || |||||||| Sbjct 961674 GATACAATAGAGAATGTAAAGGCTAAGATTCAAGATAAAGAAGGAATTCCTCCTGATCAG 961615 Query 124659 CAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAAT 124718 ||| | | || ||||| ||||||||| | || ||| | ||||| | |||||||||| Sbjct 961614 CAACGATTGATCTTTGCTGGAAAACAACTTGAAGATGGAAGAACACTCTCAGATTATAAT 961555 Query 124719 ATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGTAT 124768 ||||| |||||||| ||| | |||||||| || | | ||||| || || Sbjct 961554 ATTCAGAAAGAATCTACTCTTCATTTGGTATTGAGACTTCGAGGAGGAAT 961505 Score = 136 bits (150), Expect = 6e-27 Identities = 158/213 (74%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 124538 AATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAA 124597 ||||||||| ||| | || || || || || || ||||| || | || ||||||| Sbjct 960758 AATGCAAATCTTTGTCAAAACTCTTACTGGAAAGACTATTACACTTGAAGTTGAAGCTTC 960699 Query 124598 TGATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCA 124657 |||||||| || ||||| || ||||||||||||||||| || || |||||||| Sbjct 960698 GGATACAATAGAGAACGTAAAAGCTAAGATTCAAGATAAAGAAGGAATTCCTCCTGATCA 960639 Query 124658 ACAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAA 124717 ||| | | |||||||| ||||||||| | || ||| | ||||| | |||||| || Sbjct 960638 GCAACGATTGATTTTTGCTGGAAAACAACTTGAAGATGGAAGAACACTCTTAGATTACAA 960579 Query 124718 TATTCAAAAAGAATCAACTTTGCATTTGGTTTT 124750 ||| ||||||||||| || |||| ||||| || Sbjct 960578 TATCCAAAAAGAATCTACACTGCACTTGGTATT 960546 Score = 134 bits (148), Expect = 2e-26 Identities = 173/239 (72%), Gaps = 0/239 (0%) Strand=Plus/Minus Query 124538 AATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAA 124597 ||||||||| ||| | || || || || || || ||||| || | || ||||||| Sbjct 961507 AATGCAAATCTTTGTCAAAACTCTCACTGGAAAGACTATTACACTTGACGTTGAAGCTTC 961448 Query 124598 TGATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCA 124657 ||||| || || |||| || |||||||| |||||||| || || ||||| || Sbjct 961447 GGATACGATAGAGAACGTAAAGGCTAAGATTCAAGACAAAGAAGGAATTCCCCCTGACCA 961388 Query 124658 ACAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAA 124717 |||| | | |||||||| || |||||| |||| ||| | ||||| | ||||||||| Sbjct 961387 ACAACGTTTGATTTTTGCTGGTAAACAACTAGAAGATGGAAGAACACTCTCAGATTATAA 961328 Query 124718 TATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGTATTAAAAATT 124776 |||||| |||||||| ||| | |||||||| || | | ||||| || || ||| || Sbjct 961327 TATTCAGAAAGAATCTACTCTTCATTTGGTATTGAGACTTCGAGGAGGAATGCAAATTT 961269 Score = 123 bits (136), Expect = 4e-23 Identities = 157/216 (73%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 124538 AATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAA 124597 ||||||||| ||| | || || || || || || ||||| || | || ||||||| Sbjct 960986 AATGCAAATCTTTGTCAAAACTCTCACTGGAAAGACTATTACACTTGAAGTTGAAGCTTC 960927 Query 124598 TGATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCA 124657 ||||| || || |||| || ||||||||||||||||| || || |||||||| Sbjct 960926 GGATACGATAGAGAACGTAAAGGCTAAGATTCAAGATAAAGAAGGAATTCCTCCTGATCA 960867 Query 124658 ACAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAA 124717 |||| | | |||||||| || ||||| | || ||| | ||||| | |||||||| Sbjct 960866 ACAACGTTTGATTTTTGCTGGCAAACAGCTTGAAGATGGAAGAACACTCTCTGATTATAA 960807 Query 124718 TATTCAAAAAGAATCAACTTTGCATTTGGTTTTACG 124753 |||||| |||||||| ||| | ||| |||| || || Sbjct 960806 TATTCAGAAAGAATCTACTCTTCATCTGGTATTGCG 960771 Score = 120 bits (132), Expect = 5e-22 Identities = 114/146 (78%), Gaps = 0/146 (0%) Strand=Plus/Minus Query 124623 AAAATTCAAGATAAAGAAGGTATACCACCTGATCAACAAAGGCTTATTTTTGCAGGAAAA 124682 |||||||||||||||||||| || || |||||||| || | | |||||||| |||||| Sbjct 961129 AAAATTCAAGATAAAGAAGGAATTCCTCCTGATCAGCAGCGATTGATTTTTGCTGGAAAA 961070 Query 124683 CAATTAGAGGATAGTCGAACATTAGAAGATTATAATATTCAAAAAGAATCAACTTTGCAT 124742 ||| | || ||| | ||||| | ||||||||||||||| |||||||| ||| | ||| Sbjct 961069 CAACTTGAAGATGGAAGAACACTCTCAGATTATAATATTCAGAAAGAATCTACTCTTCAT 961010 Query 124743 TTGGTTTTACGTTTACGAGGTGGTAT 124768 ||||| || | | ||||| || || Sbjct 961009 TTGGTATTGAGACTTCGAGGAGGAAT 960984 Score = 113 bits (124), Expect = 7e-20 Identities = 143/197 (73%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 124539 ATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAAT 124598 |||||||| ||| | || || || || || || || || || |||| ||||||| Sbjct 964320 ATGCAAATCTTTGTCAAAACTCTCACTGGTAAGACCATTACCTTAGAAGTTGAAGCTTCA 964261 Query 124599 GATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCAA 124658 || ||||| ||| | ||| || ||||||||||||||||| || || || |||||| Sbjct 964260 GACACAATAGAGAATGTTAAAGCTAAGATTCAAGATAAAGAAGGAATTCCTCCAGATCAA 964201 Query 124659 CAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAAT 124718 ||| | | || ||||| || |||||| |||| ||| | |||| | ||||||||| Sbjct 964200 CAACGTTTAATCTTTGCTGGTAAACAACTAGAAGATGGAAGAACTCTTTCAGATTATAAC 964141 Query 124719 ATTCAAAAAGAATCAAC 124735 ||||| |||||||| || Sbjct 964140 ATTCAGAAAGAATCTAC 964124 Score = 93.3 bits (102), Expect = 6e-14 Identities = 108/146 (74%), Gaps = 0/146 (0%) Strand=Plus/Minus Query 124623 AAAATTCAAGATAAAGAAGGTATACCACCTGATCAACAAAGGCTTATTTTTGCAGGAAAA 124682 || |||||||| |||||||| || || ||||| |||||| | | |||||||| || ||| Sbjct 964464 AAGATTCAAGACAAAGAAGGAATTCCCCCTGACCAACAACGTTTGATTTTTGCTGGTAAA 964405 Query 124683 CAATTAGAGGATAGTCGAACATTAGAAGATTATAATATTCAAAAAGAATCAACTTTGCAT 124742 || |||| ||| | |||| | |||||||||||| ||||| ||||| || | ||| Sbjct 964404 CAGCTAGAAGATGGAAGAACTCTCTCAGATTATAATATCCAAAAGGAATCTACACTCCAT 964345 Query 124743 TTGGTTTTACGTTTACGAGGTGGTAT 124768 || || || | | |||| ||||| Sbjct 964344 TTAGTGTTGAGACTTAGAGGAGGTAT 964319 >seq2544 Length=277 Score = 152 bits (168), Expect = 8e-32 Identities = 165/216 (76%), Gaps = 2/216 (1%) Strand=Plus/Plus Query 124539 ATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAAT 124598 |||||||||||| |||| || || || || ||||| || ||| |||| ||||||| | Sbjct 56 ATGCAAATATTTGTAAAAACTCTTACTGGAAAAACAATTACTTTAGAAGTTGAAGCTTCT 115 Query 124599 GATACAATTTCTAAT-TTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCA 124657 ||||||||| ||| ||||||| |||||||||||||| |||||||| || || ||||| Sbjct 116 GATACAATTGAAAATGTTAAAAC-TAAAATTCAAGATAAGGAAGGTATTCCTCCGGATCA 174 Query 124658 ACAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAA 124717 ||| || || || ||||| || || || || || ||| | || || | ||||| || Sbjct 175 ACAGAGACTGATCTTTGCTGGTAAGCAGTTGGAAGATGGCCGTACTCTTTCCGATTACAA 234 Query 124718 TATTCAAAAAGAATCAACTTTGCATTTGGTTTTACG 124753 ||||||||||||||| || | ||| | ||||| || Sbjct 235 TATTCAAAAAGAATCTACACTTCATCTTGTTTTGCG 270 >seq87 Length=1479609 Score = 145 bits (160), Expect = 1e-29 Identities = 148/193 (77%), Gaps = 0/193 (0%) Strand=Plus/Minus Query 124536 ACAATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCA 124595 || ||||| |||||| | || || | || || |||||||| ||| | || | |||||| Sbjct 253292 ACGATGCAGATATTTGTGAAAACTTTGACGGGTAAAACTATCACTCTTGAAGTAGAAGCA 253233 Query 124596 AATGATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGAT 124655 ||||| || ||| | ||| |||||||| ||||||||||| |||||||||||| Sbjct 253232 TCAGATACTATAGAAAATGTGAAAGCTAAAATTCAGGATAAAGAAGGAATACCACCTGAT 253173 Query 124656 CAACAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTAT 124715 || ||| | ||||||||||| ||||| |||||||| ||| | || || ||| || ||| Sbjct 253172 CAGCAACGTCTTATTTTTGCTGGAAAGCAATTAGAAGATGGACGTACTTTATCGGACTAT 253113 Query 124716 AATATTCAAAAAG 124728 ||||||||||||| Sbjct 253112 AATATTCAAAAAG 253100 >seq1683 Length=220 Score = 141 bits (156), Expect = 1e-28 Identities = 159/213 (75%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 124541 GCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAATGA 124600 |||||| || | ||||| || ||||| |||||||| ||| | || ||||||| ||| Sbjct 1 GCAAATTTTCGTCAAGACTCTTACAGGAAAAACTATTACTCTTGAAGTTGAAGCTTCTGA 60 Query 124601 TACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCAACA 124660 ||| ||| ||| | || ||||||||||| ||||||||||| || ||||| ||||| Sbjct 61 TACTATTGAAAATGTTAAGGCTAAAATTCAAGACAAAGAAGGTATTCCCCCTGACCAACA 120 Query 124661 AAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAATAT 124720 ||| | |||||||| || ||||| | || ||| |||| || | ||||||||||| Sbjct 121 AAGATTGATTTTTGCTGGTAAACAGCTGGAAGATGGTCGTACTCTTTCTGATTATAATAT 180 Query 124721 TCAAAAAGAATCAACTTTGCATTTGGTTTTACG 124753 ||||||||||| || | ||| | ||||| || Sbjct 181 CCAAAAAGAATCTACACTTCATCTTGTTTTGCG 213 >seq65 Length=484858 Score = 118 bits (130), Expect = 2e-21 Identities = 107/135 (79%), Gaps = 0/135 (0%) Strand=Plus/Plus Query 124640 AGGTATACCACCTGATCAACAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCG 124699 ||| || ||||||| ||||||||| | || ||||| ||||||||||| || ||| || | Sbjct 16952 AGGAATTCCACCTGGTCAACAAAGATTAATCTTTGCTGGAAAACAATTGGAAGATGGTAG 17011 Query 124700 AACATTAGAAGATTATAATATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACG 124759 ||| | ||||||||||||||| || ||||| || || |||||||| |||||||| | Sbjct 17012 GACACTTTCAGATTATAATATTCAGAAGGAATCTACATTACATTTGGTACTACGTTTAAG 17071 Query 124760 AGGTGGTATTAAAAA 124774 |||||| |||||| Sbjct 17072 GGGTGGTGCTAAAAA 17086 Score = 93.3 bits (102), Expect = 6e-14 Identities = 88/110 (80%), Gaps = 2/110 (2%) Strand=Plus/Plus Query 124536 ACAATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCA 124595 || ||||| |||||| | ||||| ||||| ||||||||||| ||| | || | |||||| Sbjct 16784 ACCATGCAGATATTTGTGAAGACTCTAACTGGCAAAACTATTACTCTTGAAGTCGAAGCA 16843 Query 124596 AATGATACAATTTCTAAT-TTAAAACAGAAAATTCAAGATAAAGAAGGTA 124644 ||||| ||| ||| ||||| || |||||||||||||||||||||| Sbjct 16844 TCAGATACTATTGAAAATGTTAAAGCA-AAAATTCAAGATAAAGAAGGTA 16892 >seq83 Length=2348123 Score = 86.0 bits (94), Expect = 9e-12 Identities = 348/523 (67%), Gaps = 54/523 (10%) Strand=Plus/Minus Query 228532 AATTTTAATATAAATAT--TTCATCATTACCAAAATCATTGATTACATTAAATATTAATT 228589 ||| ||||||||||||| | | || | || | || ||| |||| |||| |||| Sbjct 2296339 AATATTAATATAAATATAAATAAATATAATGTAATTAATAATTTATATTATATATAAATT 2296280 Query 228590 CATGTTATATAAAACACACTAATTTTATAAATGATTTATATAATTTGAAGGAATTGGATA 228649 || ||||||| | | | || ||||| || | |||||| || | | |||| || Sbjct 2296279 -ATATTATATATA----AATTATATTATATATAAATTATATTATAT--ATAAATTATAT- 2296228 Query 228650 TATCTAGAAATTATAATATAAATATTTCATCATTACCAAAATCATTAATCAAATTAAATA 228709 ||| || |||||||| |||| ||| | || ||| | || || ||| | |||| ||| Sbjct 2296227 TATATATAAATTATATTATATATAAATTAT-ATT----ATAT-ATAAATTATATTATATA 2296174 Query 228710 TTAGTGATTGCGATATTAAAAAT-ACTAATTTTATAAATGATTTAGATAATTTGAAAGAA 228768 | | ||| |||||| | || | | || ||||| || | ||| || || | | || Sbjct 2296173 TAA---ATT---ATATTATATATAAATTATATTATATATAAATTATATTATAT--ATAAA 2296122 Query 228769 TTAGATATATCTAACAATTATAATATAAATATTTCATCATTACCAAAAACATTGACTACA 228828 ||| || ||| || ||||||| |||| ||| | || ||| | | || | || | Sbjct 2296121 TTATAT-TATATATAAATTATATTATATATAAATTAT-ATT-----ATATATAAATTATA 2296069 Query 228829 TTAAATATTAGTTCATGTAATATAAAAAATACtaattttataattaatttagataatttg 228888 ||| |||| | || || | ||||| ||| | || ||||| ||| ||| || || | Sbjct 2296068 TTATATATAAATT-ATATTATATATAAA----TTATATTATATATAAATTATATTATAT- 2296015 Query 228889 aaagaattagatatatctaaaaattttaatataaatatttCATCATTACCAAAATCATTG 228948 | ||||| || ||| || ||||| || |||| ||| | || ||| | || || Sbjct 2296014 -ATAAATTATAT-TATATATAAATTATATTATATATAAATTAT-ATT----ATAT-ATAA 2295963 Query 228949 ATTACATTAAATATTAATTCATGTTATATAAACCATACTAATTTTATAAATGATTTATAT 229008 |||| |||| |||| |||| || ||||||| | | | || ||||| || | |||||| Sbjct 2295962 ATTATATTATATATAAATT-ATATTATATATA----AATTATATTATATATAAATTATAT 2295908 Query 229009 AATTTGAAAGAATTAGATATATCTAACAATTATAATATAAATA 229051 || | | ||||| || ||| || ||||||| |||| ||| Sbjct 2295907 TATAT--ATAAATTATAT-TATATATAAATTATATTATATATA 2295868 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 755417849472000