Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Apis_20dorsata_20[refseq_20GCF_5F000469605.1_202013-09-24] 4,040 sequences; 230,340,171 total letters Query= NC_004117.1 Length=158482 Score E Sequences producing significant alignments: (Bits) Value seq108 134 1e-26 seq31 125 7e-24 seq2544 118 1e-21 seq87 100 3e-16 seq1683 96.9 4e-15 >seq108 Length=811940 Score = 134 bits (148), Expect = 1e-26 Identities = 168/228 (74%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 142958 CCTCCTCGTAAACGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTC 143017 || |||| |||||||| |||||||| | ||| || |||||||| || || ||||| Sbjct 251194 CCACCTCTCAAACGCAATACTAAATGTAGTGTTGACTCTTTTTGAATATTATAATCAGAT 251253 Query 143018 ATTGTGC-TCGAGTCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGG 143076 | ||| | || | ||||| ||||||||||||||| |||||| | ||||||||| || || Sbjct 251254 AATGTACGTCCA-TCTTCTAGTTGTTTACCAGCAAAGATCAATCTTTGCTGATCTGGTGG 251312 Query 143077 TATGCCTTCTTTGTCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCCGTGGGTTCTAC 143136 || ||||| ||||| |||||| ||||| | ||| | || || | || ||||| Sbjct 251313 AATTCCTTCCTTGTCTTGAATTTTCGCTTTTACATTTTCAATGGTATCTGAGGCCTCTAC 251372 Query 143137 TTCAACAGTCACCGTCTTGCCGGTCAATGTTTTTACGAATATTTGCAT 143184 || | ||| | || || || ||||||||||| || || || ||||| Sbjct 251373 CTCCAGAGTTATTGTTTTACCTGTCAATGTTTTGACAAAGATCTGCAT 251420 Score = 113 bits (124), Expect = 5e-20 Identities = 164/229 (72%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 142958 CCTCCTCGTAAACGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTC 143017 || |||| |||||||| |||||||| | ||| ||||||||||| || || ||||| Sbjct 250510 CCACCTCTCAAACGCAATACTAAATGTAGTGTTGATTCTTTTTGAATATTATAATCCGAA 250569 Query 143018 ATTGTGCTCGAGTCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 143077 | ||| | ||||| || |||||||||||| | |||| | || ||||||||||| Sbjct 250570 AGTGTACGACCATCTTCCAGCTGTTTACCAGCAAAAATCAATCTCTGTTGATCGGGAGGA 250629 Query 143078 ATGCCTTCTTTGTCGGTAATTTTTTGTTTTAGC-TGTTCCACCGTGTCCGTGGGTTCTAC 143136 || |||||||| || | | |||| || ||| | | ||| | || || | | ||| || Sbjct 250630 ATACCTTCTTTATC-CTGAATTTTAGTCTTAACATTTTCAATAGTATCGGATGCTTCAAC 250688 Query 143137 TTCAACAGTCACCGTCTTGCCGGTCAATGTTTTTACGAATATTTGCATA 143185 ||| | ||| | || || || || | || || ||||| ||||||||| Sbjct 250689 TTCTAAAGTAATAGTTTTTCCTGTAAGAGTCTTAACGAAAATTTGCATA 250737 Score = 109 bits (120), Expect = 6e-19 Identities = 163/229 (71%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 142958 CCTCCTCGTAAACGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTC 143017 || ||||| | ||| | || | |||| || ||||||||||| || || ||||| Sbjct 248999 CCACCTCGGAGACGAAGTACAAGGTGAAGAGTCGATTCTTTTTGAATATTATAATCAGAA 249058 Query 143018 ATTGTGC-TCGAGTCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGG 143076 | ||| | || | ||||| | |||||| |||||| |||||| | || ||||| ||||| Sbjct 249059 AGTGTACGTCCA-TCTTCCAATTGTTTTCCAGCAAAGATCAATCTCTGTTGATCAGGAGG 249117 Query 143077 TATGCCTTCTTTGTCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCCGTGGGTTCTAC 143136 || ||||||||||| ||||||| ||||| | ||| | ||||| | | ||| || Sbjct 249118 AATACCTTCTTTGTCTTGAATTTTTGCTTTTACATTTTCAATTGTGTCGGAAGCTTCAAC 249177 Query 143137 TTCAACAGTCACCGTCTTGCCGGTCAATGTTTTTACGAATATTTGCATA 143185 ||||| ||| | || || || || | || || || || ||||||||| Sbjct 249178 TTCAAGAGTAATAGTTTTACCCGTGAGAGTCTTGACAAAAATTTGCATA 249226 Score = 109 bits (120), Expect = 6e-19 Identities = 153/215 (71%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 142970 CGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTCATTGTGCTCGAG 143029 |||||||| | ||||| ||||||||||||||| || || ||||| | ||| | Sbjct 250978 CGCAAAACAAGATGAAGTGTAGATTCTTTTTGAATATTATAATCAGAAAGTGTACGACCA 251037 Query 143030 TCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTG 143089 ||||| | |||||| |||||| | |||| | || ||||||||||| || |||||||| Sbjct 251038 TCTTCCAATTGTTTTCCAGCAAAAATCAATCTCTGTTGATCGGGAGGAATACCTTCTTTA 251097 Query 143090 TCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCCGTGGGTTCTACTTCAACAGTCACC 143149 || |||||| ||| | | ||| | || || | | ||| ||||| | ||| | Sbjct 251098 TCCTGAATTTTAGCTTTAACATTTTCAATGGTATCTGAAGCTTCAACTTCTAAAGTAATA 251157 Query 143150 GTCTTGCCGGTCAATGTTTTTACGAATATTTGCAT 143184 || || || || | |||||| || || |||||||| Sbjct 251158 GTTTTTCCAGTAAGTGTTTTGACAAAAATTTGCAT 251192 Score = 105 bits (116), Expect = 7e-18 Identities = 153/216 (71%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 142970 CGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTCATTGTGCTCGAG 143029 |||||||| | ||||| ||||||||||||||| || || |||||| | || | Sbjct 249239 CGCAAAACAAGATGAAGTGTAGATTCTTTTTGGATATTATAATCGGAAAGAGTACGACCA 249298 Query 143030 TCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTG 143089 ||||| | |||||||||||| ||||||| | || || || || || || ||||||||| Sbjct 249299 TCTTCCAACTGTTTACCAGCAAAGATCAGTCTCTGTTGGTCAGGCGGAATACCTTCTTTG 249358 Query 143090 TCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCCGTGGGTTCTACTTCAACAGTCACC 143149 || ||||||| ||||| | ||| | | || | ||| ||||||| ||| | Sbjct 249359 TCTTGAATTTTTGCTTTTACATTTTCAATGGCATCATAAGCTTCAACTTCAAGAGTAATA 249418 Query 143150 GTCTTGCCGGTCAATGTTTTTACGAATATTTGCATA 143185 || || || || | || || || || ||||||||| Sbjct 249419 GTTTTACCCGTGAGAGTCTTGACAAAAATTTGCATA 249454 Score = 102 bits (112), Expect = 8e-17 Identities = 149/211 (71%), Gaps = 0/211 (0%) Strand=Plus/Plus Query 142975 AACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTCATTGTGCTCGAGTCTTC 143034 ||| | ||| | || ||||||||||| || ||||||||| | || | ||||| Sbjct 250755 AACGAGATGGAGGGTTGATTCTTTTTGAATATTGTAATCGGAAAGAGTACGGCCATCTTC 250814 Query 143035 GAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGT 143094 | |||||| |||||| |||||| | || || || ||||| || ||||||||||| Sbjct 250815 CAATTGTTTTCCAGCAAAGATCAATCTCTGTTGGTCAGGAGGAATACCTTCTTTGTCTTG 250874 Query 143095 AATTTTTTGTTTTAGCTGTTCCACCGTGTCCGTGGGTTCTACTTCAACAGTCACCGTCTT 143154 ||| || ||||| | ||| | || || | | ||| ||||||| ||| | ||||| Sbjct 250875 AATCTTGGCTTTTACATTTTCAATGGTATCGGAAGCTTCAACTTCAAGAGTAATAGTCTT 250934 Query 143155 GCCGGTCAATGTTTTTACGAATATTTGCATA 143185 || || | ||||| ||||| ||||||||| Sbjct 250935 TCCCGTAAGAGTTTTGACGAAAATTTGCATA 250965 Score = 98.7 bits (108), Expect = 1e-15 Identities = 105/139 (76%), Gaps = 0/139 (0%) Strand=Plus/Plus Query 142970 CGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTCATTGTGCTCGAG 143029 |||||||| | ||||| ||||||||||||||| || ||||||||| | || | Sbjct 249467 CGCAAAACAAGATGAAGTGTAGATTCTTTTTGAATATTGTAATCGGAAAGAGTACGACCA 249526 Query 143030 TCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTG 143089 ||||| | |||||||||||| ||||||| | || || || || || || ||||||||| Sbjct 249527 TCTTCCAACTGTTTACCAGCAAAGATCAGTCTCTGTTGGTCAGGCGGAATACCTTCTTTG 249586 Query 143090 TCGGTAATTTTTTGTTTTA 143108 || ||||||| ||||| Sbjct 249587 TCTTGAATTTTTGCTTTTA 249605 >seq31 Length=1439309 Score = 125 bits (138), Expect = 7e-24 Identities = 164/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 142958 CCTCCTCGTAAACGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTC 143017 |||||||| | | ||| || || || | ||||||||||||||| || |||||||| Sbjct 960531 CCTCCTCGAAGTCTCAATACCAAGTGCAGTGTAGATTCTTTTTGGATATTGTAATCTAAG 960590 Query 143018 ATTGTGCTCGAGTCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 143077 | ||| || ||||| |||||||| |||||| | |||| ||||||||||| ||||| Sbjct 960591 AGTGTTCTTCCATCTTCAAGTTGTTTTCCAGCAAAAATCAATCGTTGCTGATCAGGAGGA 960650 Query 143078 ATGCCTTCTTTGTCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCCGTGGGTTCTACT 143137 || |||||||| || ||| || ||||| | || | || |||| | ||| ||| Sbjct 960651 ATTCCTTCTTTATCTTGAATCTTAGCTTTTACGTTCTCTATTGTATCCGAAGCTTCAACT 960710 Query 143138 TCAACAGTCACCGTCTTGCCGGTCAATGTTTTTACGAATATTTGCAT 143184 |||| || | ||||| || || | ||||| || || |||||||| Sbjct 960711 TCAAGTGTAATAGTCTTTCCAGTAAGAGTTTTGACAAAGATTTGCAT 960757 Score = 120 bits (132), Expect = 3e-22 Identities = 165/231 (71%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 142958 CCTCCTCGTAAACGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTC 143017 |||||||| | | ||| |||| |||| |||||||||||| || ||||| ||||| Sbjct 964094 CCTCCTCGAAGTCTCAACACTAGGTGAAGTGTAGATTCTTTCTGAATGTTATAATCTGAA 964153 Query 143018 ATTGTGCTCGAGTCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 143077 | || || ||||| ||||||||||||||| |||| | |||||| ||||| ||||| Sbjct 964154 AGAGTTCTTCCATCTTCTAGTTGTTTACCAGCAAAGATTAAACGTTGTTGATCTGGAGGA 964213 Query 143078 ATGCCTTCTTTGTCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCCGTGGGTTCTACT 143137 || |||||||| || ||| || ||| | | || | ||||| | | ||| ||| Sbjct 964214 ATTCCTTCTTTATCTTGAATCTTAGCTTTAACATTCTCTATTGTGTCTGAAGCTTCAACT 964273 Query 143138 TCAACAGTCACCGTCTTGCCGGTCAATGTTTTTACGAATATTTGCATAGCT 143188 || | || | ||||| || || | ||||| || || ||||||||| || Sbjct 964274 TCTAAGGTAATGGTCTTACCAGTGAGAGTTTTGACAAAGATTTGCATACCT 964324 Score = 116 bits (128), Expect = 4e-21 Identities = 162/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 142958 CCTCCTCGTAAACGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTC 143017 |||||||| | | ||| || ||||||| ||||||||||| || || || ||||| Sbjct 961280 CCTCCTCGAAGTCTCAATACCAAATGAAGAGTAGATTCTTTCTGAATATTATAATCTGAG 961339 Query 143018 ATTGTGCTCGAGTCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 143077 | ||| || ||||| ||||||||||||||| | |||| |||||| || || || || Sbjct 961340 AGTGTTCTTCCATCTTCTAGTTGTTTACCAGCAAAAATCAAACGTTGTTGGTCAGGGGGA 961399 Query 143078 ATGCCTTCTTTGTCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCCGTGGGTTCTACT 143137 || ||||||||||| ||| || |||| | || | ||| |||| | ||| || Sbjct 961400 ATTCCTTCTTTGTCTTGAATCTTAGCCTTTACGTTCTCTATCGTATCCGAAGCTTCAACG 961459 Query 143138 TCAACAGTCACCGTCTTGCCGGTCAATGTTTTTACGAATATTTGCAT 143184 |||| || | ||||| || || | ||||| || || |||||||| Sbjct 961460 TCAAGTGTAATAGTCTTTCCAGTGAGAGTTTTGACAAAGATTTGCAT 961506 Score = 113 bits (124), Expect = 5e-20 Identities = 161/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 142958 CCTCCTCGTAAACGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTC 143017 ||||| || | ||||| || | ||||| ||||||||||| || || || ||||| Sbjct 960759 CCTCCGCGAAGTCGCAATACCAGATGAAGAGTAGATTCTTTCTGAATATTATAATCAGAG 960818 Query 143018 ATTGTGCTCGAGTCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 143077 | ||| || ||||| || ||||| |||||| | |||| |||||| ||||| ||||| Sbjct 960819 AGTGTTCTTCCATCTTCAAGCTGTTTGCCAGCAAAAATCAAACGTTGTTGATCAGGAGGA 960878 Query 143078 ATGCCTTCTTTGTCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCCGTGGGTTCTACT 143137 || |||||||| || ||| || |||| | || | ||| |||| | ||| ||| Sbjct 960879 ATTCCTTCTTTATCTTGAATCTTAGCCTTTACGTTCTCTATCGTATCCGAAGCTTCAACT 960938 Query 143138 TCAACAGTCACCGTCTTGCCGGTCAATGTTTTTACGAATATTTGCAT 143184 |||| || | ||||| || || | ||||| || || |||||||| Sbjct 960939 TCAAGTGTAATAGTCTTTCCAGTGAGAGTTTTGACAAAGATTTGCAT 960985 Score = 113 bits (124), Expect = 5e-20 Identities = 161/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 142958 CCTCCTCGTAAACGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTC 143017 |||||||| | | ||| || ||||||| ||||||||||| || || || ||||| Sbjct 961508 CCTCCTCGAAGTCTCAATACCAAATGAAGAGTAGATTCTTTCTGAATATTATAATCTGAG 961567 Query 143018 ATTGTGCTCGAGTCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 143077 | ||| || ||||| |||||||| |||||| |||||| ||||||||||| ||||| Sbjct 961568 AGTGTTCTTCCATCTTCAAGTTGTTTTCCAGCAAAGATCAATCGTTGCTGATCAGGAGGA 961627 Query 143078 ATGCCTTCTTTGTCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCCGTGGGTTCTACT 143137 || |||||||| || ||| || |||| | || | || || | | ||| ||| Sbjct 961628 ATTCCTTCTTTATCTTGAATCTTAGCCTTTACATTCTCTATTGTATCTGAAGCTTCAACT 961687 Query 143138 TCAACAGTCACCGTCTTGCCGGTCAATGTTTTTACGAATATTTGCAT 143184 |||| ||| | || || || || | ||||| || || || ||||| Sbjct 961688 TCAAGAGTGATGGTTTTTCCAGTTAGGGTTTTAACAAAAATCTGCAT 961734 Score = 105 bits (116), Expect = 7e-18 Identities = 145/203 (71%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 142958 CCTCCTCGTAAACGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTC 143017 |||||||| | | ||| || ||||||| ||||||||||| || || || ||||| Sbjct 960987 CCTCCTCGAAGTCTCAATACCAAATGAAGAGTAGATTCTTTCTGAATATTATAATCTGAG 961046 Query 143018 ATTGTGCTCGAGTCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 143077 | ||| || ||||| |||||||| |||||| | |||| || |||||||| ||||| Sbjct 961047 AGTGTTCTTCCATCTTCAAGTTGTTTTCCAGCAAAAATCAATCGCTGCTGATCAGGAGGA 961106 Query 143078 ATGCCTTCTTTGTCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCCGTGGGTTCTACT 143137 || |||||||| || |||||| |||| | || | ||| |||| | ||| ||| Sbjct 961107 ATTCCTTCTTTATCTTGAATTTTAGCCTTTACGTTCTCTATCGTATCCGAAGCTTCAACT 961166 Query 143138 TCAACAGTCACCGTCTTGCCGGT 143160 |||| || | ||||| || || Sbjct 961167 TCAAGTGTAATAGTCTTTCCAGT 961189 Score = 89.7 bits (98), Expect = 5e-13 Identities = 100/134 (75%), Gaps = 0/134 (0%) Strand=Plus/Plus Query 142958 CCTCCTCGTAAACGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTC 143017 ||||||| | | ||| |||||||| | ||||||||| ||||| || || ||||| Sbjct 964322 CCTCCTCTAAGTCTCAACACTAAATGGAGTGTAGATTCCTTTTGGATATTATAATCTGAG 964381 Query 143018 ATTGTGCTCGAGTCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 143077 | || || ||||| || |||||||||||| | |||| |||||| || || || || Sbjct 964382 AGAGTTCTTCCATCTTCTAGCTGTTTACCAGCAAAAATCAAACGTTGTTGGTCAGGGGGA 964441 Query 143078 ATGCCTTCTTTGTC 143091 || ||||||||||| Sbjct 964442 ATTCCTTCTTTGTC 964455 Score = 86.0 bits (94), Expect = 6e-12 Identities = 143/207 (69%), Gaps = 0/207 (0%) Strand=Plus/Plus Query 142978 TAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTCATTGTGCTCGAGTCTTCGAG 143037 || ||||| |||||||||||||| || || ||||| | ||| || ||||| || Sbjct 964776 TAGATGAAGAGTAGATTCTTTTTGAATATTATAATCTGAGAGTGTTCTACCATCTTCAAG 964835 Query 143038 TTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTAAT 143097 |||||| |||||| | |||| |||||| ||||| || || || || ||||| || ||| Sbjct 964836 TTGTTTTCCAGCAAAAATCAAACGTTGTTGATCTGGTGGAATTCCCTCTTTATCTTGAAT 964895 Query 143098 TTTTTGTTTTAGCTGTTCCACCGTGTCCGTGGGTTCTACTTCAACAGTCACCGTCTTGCC 143157 || |||| | || | ||||| | | ||| ||||| | || | || || || Sbjct 964896 CTTAGCCTTTACATTCTCTATTGTGTCTGAAGCTTCAACTTCTAAGGTGATAGTTTTTCC 964955 Query 143158 GGTCAATGTTTTTACGAATATTTGCAT 143184 || || || || || || || ||||| Sbjct 964956 TGTTAAAGTCTTAACAAAGATCTGCAT 964982 >seq2544 Length=277 Score = 118 bits (130), Expect = 1e-21 Identities = 158/217 (73%), Gaps = 2/217 (1%) Strand=Plus/Minus Query 142970 CGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTCATTGTGCTCGAG 143029 |||||||| | ||||| ||||||||||||||| || ||||||||| | || | Sbjct 270 CGCAAAACAAGATGAAGTGTAGATTCTTTTTGAATATTGTAATCGGAAAGAGTACGGCCA 211 Query 143030 TCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTG 143089 ||||| | || ||||||||| ||||||| | || ||||| ||||| || ||||| || Sbjct 210 TCTTCCAACTGCTTACCAGCAAAGATCAGTCTCTGTTGATCCGGAGGAATACCTTCCTTA 151 Query 143090 TCGGTAATTTTTTGTTTTAGC-TGTTCCACCGTGTCCGTGGGTTCTACTTCAACAGTCAC 143148 || |||||| |||||| | | ||| | || || | | ||| ||||| | ||| | Sbjct 150 TCTTGAATTTTA-GTTTTAACATTTTCAATTGTATCAGAAGCTTCAACTTCTAAAGTAAT 92 Query 143149 CGTCTTGCCGGTCAATGTTTTTACGAATATTTGCATA 143185 || || || || | |||||||| |||||||||||| Sbjct 91 TGTTTTTCCAGTAAGAGTTTTTACAAATATTTGCATA 55 >seq87 Length=1479609 Score = 100 bits (110), Expect = 3e-16 Identities = 115/155 (74%), Gaps = 0/155 (0%) Strand=Plus/Plus Query 143030 TCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTG 143089 ||||| | ||| || |||||| | || |||||||||||||| || ||||| |||||||| Sbjct 253135 TCTTCTAATTGCTTTCCAGCAAAAATAAGACGTTGCTGATCAGGTGGTATTCCTTCTTTA 253194 Query 143090 TCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCCGTGGGTTCTACTTCAACAGTCACC 143149 || |||||| ||| | | ||| | || || | | ||||||||||| ||| | Sbjct 253195 TCCTGAATTTTAGCTTTCACATTTTCTATAGTATCTGATGCTTCTACTTCAAGAGTGATA 253254 Query 143150 GTCTTGCCGGTCAATGTTTTTACGAATATTTGCAT 143184 || || || ||||| ||||| || ||||| ||||| Sbjct 253255 GTTTTACCCGTCAAAGTTTTCACAAATATCTGCAT 253289 >seq1683 Length=220 Score = 96.9 bits (106), Expect = 4e-15 Identities = 149/213 (70%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 142970 CGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTCATTGTGCTCGAG 143029 |||||||| | ||||| ||||||||||||||| || || ||||| | || | Sbjct 213 CGCAAAACAAGATGAAGTGTAGATTCTTTTTGGATATTATAATCAGAAAGAGTACGACCA 154 Query 143030 TCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTG 143089 ||||| || |||||||||||| | |||| | ||| || || || || || ||||||||| Sbjct 153 TCTTCCAGCTGTTTACCAGCAAAAATCAATCTTTGTTGGTCAGGGGGAATACCTTCTTTG 94 Query 143090 TCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCCGTGGGTTCTACTTCAACAGTCACC 143149 || |||||| || | | ||| | || || | | ||| ||||||| ||| | Sbjct 93 TCTTGAATTTTAGCCTTAACATTTTCAATAGTATCAGAAGCTTCAACTTCAAGAGTAATA 34 Query 143150 GTCTTGCCGGTCAATGTTTTTACGAATATTTGC 143182 || || || || | || || ||||| |||||| Sbjct 33 GTTTTTCCTGTAAGAGTCTTGACGAAAATTTGC 1 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 506988795772800