Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Apis_20dorsata_20[refseq_20GCF_5F000469605.1_202013-09-24] 4,040 sequences; 230,340,171 total letters Query= NC_005309.1 Length=359853 Score E Sequences producing significant alignments: (Bits) Value seq108 217 3e-51 seq31 214 4e-50 seq87 185 2e-41 seq2544 174 4e-38 seq1683 161 2e-34 seq65 120 7e-22 seq348 98.7 2e-15 seq50 93.3 1e-13 seq69 87.8 4e-12 >seq108 Length=811940 Score = 217 bits (240), Expect = 3e-51 Identities = 174/210 (83%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 104351 ACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCT 104410 || ||||| | |||||||||||| ||||||||||| ||||| || || | ||| ||||| Sbjct 250984 ACAAGATGAAGTGTAGATTCTTTTTGAATATTATAATCAGAAAGTGTACGACCATCTTCC 251043 Query 104411 AGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGA 104470 | |||||||||||||||||| | ||||||||||| ||||| || ||||||||||||||| Sbjct 251044 AATTGTTTTCCAGCAAAAATCAATCTCTGTTGATCGGGAGGAATACCTTCTTTATCCTGA 251103 Query 104471 ATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTA 104530 || || ||||| |||||||| | |||||| || ||| || |||| |||||||| || Sbjct 251104 ATTTTAGCTTTAACATTTTCAATGGTATCTGAAGCTTCAACTTCTAAAGTAATAGTTTTT 251163 Query 104531 CCAGTAAGTGTTTTTACAAATATCTGCATT 104560 |||||||||||||| ||||| || |||||| Sbjct 251164 CCAGTAAGTGTTTTGACAAAAATTTGCATT 251193 Score = 188 bits (208), Expect = 2e-42 Identities = 178/227 (78%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 104333 CCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGAT 104392 || |||| || | |||||| || || | || |||||||| ||||||||||| ||||| Sbjct 248999 CCACCTCGGAGACGAAGTACAAGGTGAAGAGTCGATTCTTTTTGAATATTATAATCAGAA 249058 Query 104393 AGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGT 104452 || || | || ||||| | ||||||||||||||| || | ||||||||||||||||| Sbjct 249059 AGTGTACGTCCATCTTCCAATTGTTTTCCAGCAAAGATCAATCTCTGTTGATCAGGAGGA 249118 Query 104453 ATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCTACC 104512 || |||||||| || ||||| ||||||||||||||||| | || ||| || ||| || Sbjct 249119 ATACCTTCTTTGTCTTGAATTTTTGCTTTTACATTTTCAATTGTGTCGGAAGCTTCAACT 249178 Query 104513 TCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559 || || |||||||| ||||| || || || || ||||| || ||||| Sbjct 249179 TCAAGAGTAATAGTTTTACCCGTGAGAGTCTTGACAAAAATTTGCAT 249225 Score = 188 bits (208), Expect = 2e-42 Identities = 169/212 (80%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 104348 AGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCT 104407 || || ||||| | || |||||||| |||||||| || || || ||||| | || ||| Sbjct 250753 AGAACGAGATGGAGGGTTGATTCTTTTTGAATATTGTAATCGGAAAGAGTACGGCCATCT 250812 Query 104408 TCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCC 104467 || | ||||||||||||||| || | |||||||| |||||||| || |||||||| || Sbjct 250813 TCCAATTGTTTTCCAGCAAAGATCAATCTCTGTTGGTCAGGAGGAATACCTTCTTTGTCT 250872 Query 104468 TGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTC 104527 |||||||| |||||||||||||| | ||||||| || ||| || || || ||||||||| Sbjct 250873 TGAATCTTGGCTTTTACATTTTCAATGGTATCGGAAGCTTCAACTTCAAGAGTAATAGTC 250932 Query 104528 TTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559 || || ||||| ||||| || || || ||||| Sbjct 250933 TTTCCCGTAAGAGTTTTGACGAAAATTTGCAT 250964 Score = 181 bits (200), Expect = 2e-40 Identities = 178/230 (77%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 104330 ATTCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCA 104389 ||||| ||||| | | | ||||| ||||| ||| |||||||| ||||||||||| || Sbjct 250507 ATTCCACCTCTCAAACGCAATACTAAATGTAGTGTTGATTCTTTTTGAATATTATAATCC 250566 Query 104390 GATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGA 104449 || || || | ||| ||||| || ||||| ||||||||||| | ||||||||||| ||| Sbjct 250567 GAAAGTGTACGACCATCTTCCAGCTGTTTACCAGCAAAAATCAATCTCTGTTGATCGGGA 250626 Query 104450 GGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCT 104509 || || ||||||||||||||||| || | || |||||||| | |||||| | ||| Sbjct 250627 GGAATACCTTCTTTATCCTGAATTTTAGTCTTAACATTTTCAATAGTATCGGATGCTTCA 250686 Query 104510 ACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559 || |||| |||||||| || || ||||| || || || || || ||||| Sbjct 250687 ACTTCTAAAGTAATAGTTTTTCCTGTAAGAGTCTTAACGAAAATTTGCAT 250736 Score = 181 bits (200), Expect = 2e-40 Identities = 178/230 (77%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 104330 ATTCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCA 104389 ||||| ||||| | | | ||||| ||||| ||| || ||||| ||||||||||| ||| Sbjct 251191 ATTCCACCTCTCAAACGCAATACTAAATGTAGTGTTGACTCTTTTTGAATATTATAATCA 251250 Query 104390 GATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGA 104449 |||| || | || |||||||||||||| |||||||| || | || || ||||| || Sbjct 251251 GATAATGTACGTCCATCTTCTAGTTGTTTACCAGCAAAGATCAATCTTTGCTGATCTGGT 251310 Query 104450 GGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCT 104509 || |||||||| || || ||||| || |||||||||||||| | |||||| | ||| Sbjct 251311 GGAATTCCTTCCTTGTCTTGAATTTTCGCTTTTACATTTTCAATGGTATCTGAGGCCTCT 251370 Query 104510 ACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559 ||||| || || || || ||||| || | |||||| ||||| |||||||| Sbjct 251371 ACCTCCAGAGTTATTGTTTTACCTGTCAATGTTTTGACAAAGATCTGCAT 251420 Score = 179 bits (198), Expect = 9e-40 Identities = 165/209 (79%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 104351 ACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCT 104410 || ||||| | |||||||||||| || |||||||| || || ||||| | ||| ||||| Sbjct 249245 ACAAGATGAAGTGTAGATTCTTTTTGGATATTATAATCGGAAAGAGTACGACCATCTTCC 249304 Query 104411 AGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGA 104470 | ||||| |||||||| || || |||||||| ||||| || || |||||||| || ||| Sbjct 249305 AACTGTTTACCAGCAAAGATCAGTCTCTGTTGGTCAGGCGGAATACCTTCTTTGTCTTGA 249364 Query 104471 ATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTA 104530 || ||||||||||||||||| | || ||| || ||| || || || |||||||| ||| Sbjct 249365 ATTTTTGCTTTTACATTTTCAATGGCATCATAAGCTTCAACTTCAAGAGTAATAGTTTTA 249424 Query 104531 CCAGTAAGTGTTTTTACAAATATCTGCAT 104559 || || || || || ||||| || ||||| Sbjct 249425 CCCGTGAGAGTCTTGACAAAAATTTGCAT 249453 Score = 140 bits (154), Expect = 7e-28 Identities = 115/140 (82%), Gaps = 0/140 (0%) Strand=Plus/Plus Query 104351 ACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCT 104410 || ||||| | |||||||||||| |||||||| || || || ||||| | ||| ||||| Sbjct 249473 ACAAGATGAAGTGTAGATTCTTTTTGAATATTGTAATCGGAAAGAGTACGACCATCTTCC 249532 Query 104411 AGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGA 104470 | ||||| |||||||| || || |||||||| ||||| || || |||||||| || ||| Sbjct 249533 AACTGTTTACCAGCAAAGATCAGTCTCTGTTGGTCAGGCGGAATACCTTCTTTGTCTTGA 249592 Query 104471 ATCTTTGCTTTTACATTTTC 104490 || ||||||||||||||||| Sbjct 249593 ATTTTTGCTTTTACATTTTC 249612 >seq31 Length=1439309 Score = 214 bits (236), Expect = 4e-50 Identities = 189/236 (80%), Gaps = 0/236 (0%) Strand=Plus/Plus Query 104324 TTATTTATTCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTA 104383 |||| ||||| |||| || || | ||||| || | |||||||||||||||||| ||| Sbjct 964085 TTATACATTCCTCCTCGAAGTCTCAACACTAGGTGAAGTGTAGATTCTTTCTGAATGTTA 964144 Query 104384 TAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGA 104443 || || || |||||||| || |||||||||||||| |||||||| |||| | |||||| Sbjct 964145 TAATCTGAAAGAGTTCTTCCATCTTCTAGTTGTTTACCAGCAAAGATTAAACGTTGTTGA 964204 Query 104444 TCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTA 104503 || ||||| |||||||||||||| |||||||| ||||| ||||| |||| || || | Sbjct 964205 TCTGGAGGAATTCCTTCTTTATCTTGAATCTTAGCTTTAACATTCTCTATTGTGTCTGAA 964264 Query 104504 GGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559 | ||| || |||| ||||| ||||||||||| || ||||| ||||| || ||||| Sbjct 964265 GCTTCAACTTCTAAGGTAATGGTCTTACCAGTGAGAGTTTTGACAAAGATTTGCAT 964320 Score = 210 bits (232), Expect = 5e-49 Identities = 173/211 (82%), Gaps = 0/211 (0%) Strand=Plus/Plus Query 104350 TACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTC 104409 ||| ||||| | ||||||||||||||||||||||| ||||| || ||||| || ||||| Sbjct 960776 TACCAGATGAAGAGTAGATTCTTTCTGAATATTATAATCAGAGAGTGTTCTTCCATCTTC 960835 Query 104410 TAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTG 104469 || ||||| ||||||||||| | | |||||||||||||| |||||||||||||| || Sbjct 960836 AAGCTGTTTGCCAGCAAAAATCAAACGTTGTTGATCAGGAGGAATTCCTTCTTTATCTTG 960895 Query 104470 AATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTT 104529 |||||| || ||||| || |||| ||||| || ||| || || |||||||||||||| Sbjct 960896 AATCTTAGCCTTTACGTTCTCTATCGTATCCGAAGCTTCAACTTCAAGTGTAATAGTCTT 960955 Query 104530 ACCAGTAAGTGTTTTTACAAATATCTGCATT 104560 ||||| || ||||| ||||| || |||||| Sbjct 960956 TCCAGTGAGAGTTTTGACAAAGATTTGCATT 960986 Score = 205 bits (226), Expect = 2e-47 Identities = 184/231 (80%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 104330 ATTCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCA 104389 ||||| |||| || || | ||| | ||| | ||||||||||||||||||||||| || Sbjct 961277 ATTCCTCCTCGAAGTCTCAATACCAAATGAAGAGTAGATTCTTTCTGAATATTATAATCT 961336 Query 104390 GATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGA 104449 || || ||||| || |||||||||||||| ||||||||||| | | ||||| ||||| Sbjct 961337 GAGAGTGTTCTTCCATCTTCTAGTTGTTTACCAGCAAAAATCAAACGTTGTTGGTCAGGG 961396 Query 104450 GGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCT 104509 || ||||||||||| || |||||||| || ||||| || |||| ||||| || ||| Sbjct 961397 GGAATTCCTTCTTTGTCTTGAATCTTAGCCTTTACGTTCTCTATCGTATCCGAAGCTTCA 961456 Query 104510 ACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCATT 104560 || || |||||||||||||| ||||| || ||||| ||||| || |||||| Sbjct 961457 ACGTCAAGTGTAATAGTCTTTCCAGTGAGAGTTTTGACAAAGATTTGCATT 961507 Score = 201 bits (222), Expect = 3e-46 Identities = 182/229 (79%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 104332 TCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGA 104391 ||| |||| || || | ||| | || | |||||||||||| || ||||| || || | Sbjct 960530 TCCTCCTCGAAGTCTCAATACCAAGTGCAGTGTAGATTCTTTTTGGATATTGTAATCTAA 960589 Query 104392 TAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGG 104451 || ||||| || ||||| |||||||||||||||||||| | | || ||||||||||| Sbjct 960590 GAGTGTTCTTCCATCTTCAAGTTGTTTTCCAGCAAAAATCAATCGTTGCTGATCAGGAGG 960649 Query 104452 TATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCTAC 104511 |||||||||||||| |||||||| |||||||| || |||| ||||| || ||| || Sbjct 960650 AATTCCTTCTTTATCTTGAATCTTAGCTTTTACGTTCTCTATTGTATCCGAAGCTTCAAC 960709 Query 104512 CTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCATT 104560 || |||||||||||||| |||||||| ||||| ||||| || |||||| Sbjct 960710 TTCAAGTGTAATAGTCTTTCCAGTAAGAGTTTTGACAAAGATTTGCATT 960758 Score = 199 bits (220), Expect = 9e-46 Identities = 182/230 (79%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 104330 ATTCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCA 104389 ||||| |||| || || | ||| | ||| | ||||||||||||||||||||||| || Sbjct 961505 ATTCCTCCTCGAAGTCTCAATACCAAATGAAGAGTAGATTCTTTCTGAATATTATAATCT 961564 Query 104390 GATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGA 104449 || || ||||| || ||||| ||||||||||||||||| || | | || ||||||||| Sbjct 961565 GAGAGTGTTCTTCCATCTTCAAGTTGTTTTCCAGCAAAGATCAATCGTTGCTGATCAGGA 961624 Query 104450 GGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCT 104509 || |||||||||||||| |||||||| || |||||||| |||| ||||| || ||| Sbjct 961625 GGAATTCCTTCTTTATCTTGAATCTTAGCCTTTACATTCTCTATTGTATCTGAAGCTTCA 961684 Query 104510 ACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559 || || || || || || || ||||| || ||||| ||||| |||||||| Sbjct 961685 ACTTCAAGAGTGATGGTTTTTCCAGTTAGGGTTTTAACAAAAATCTGCAT 961734 Score = 192 bits (212), Expect = 1e-43 Identities = 166/206 (81%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 104330 ATTCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCA 104389 ||||| |||| || || | ||| | ||| | ||||||||||||||||||||||| || Sbjct 960984 ATTCCTCCTCGAAGTCTCAATACCAAATGAAGAGTAGATTCTTTCTGAATATTATAATCT 961043 Query 104390 GATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGA 104449 || || ||||| || ||||| |||||||||||||||||||| | | ||| ||||||||| Sbjct 961044 GAGAGTGTTCTTCCATCTTCAAGTTGTTTTCCAGCAAAAATCAATCGCTGCTGATCAGGA 961103 Query 104450 GGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCT 104509 || |||||||||||||| ||||| || || ||||| || |||| ||||| || ||| Sbjct 961104 GGAATTCCTTCTTTATCTTGAATTTTAGCCTTTACGTTCTCTATCGTATCCGAAGCTTCA 961163 Query 104510 ACCTCTAGTGTAATAGTCTTACCAGT 104535 || || |||||||||||||| ||||| Sbjct 961164 ACTTCAAGTGTAATAGTCTTTCCAGT 961189 Score = 181 bits (200), Expect = 2e-40 Identities = 166/210 (79%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 104353 TAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAG 104412 |||||| | ||||||||||| ||||||||||| || || || |||||||| ||||| || Sbjct 964776 TAGATGAAGAGTAGATTCTTTTTGAATATTATAATCTGAGAGTGTTCTACCATCTTCAAG 964835 Query 104413 TTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAAT 104472 |||||||||||||||||| | | |||||||| || || ||||| |||||||| ||||| Sbjct 964836 TTGTTTTCCAGCAAAAATCAAACGTTGTTGATCTGGTGGAATTCCCTCTTTATCTTGAAT 964895 Query 104473 CTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACC 104532 ||| || |||||||| |||| || || || ||| || |||| || ||||| || || Sbjct 964896 CTTAGCCTTTACATTCTCTATTGTGTCTGAAGCTTCAACTTCTAAGGTGATAGTTTTTCC 964955 Query 104533 AGTAAGTGTTTTTACAAATATCTGCATTTT 104562 || | || || ||||| ||||||||||| Sbjct 964956 TGTTAAAGTCTTAACAAAGATCTGCATTTT 964985 Score = 129 bits (142), Expect = 1e-24 Identities = 116/146 (79%), Gaps = 0/146 (0%) Strand=Plus/Plus Query 104330 ATTCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCA 104389 || || ||||| || || | |||| ||| | ||||||||| || || |||||||| || Sbjct 964319 ATACCTCCTCTAAGTCTCAACACTAAATGGAGTGTAGATTCCTTTTGGATATTATAATCT 964378 Query 104390 GATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGA 104449 || |||||||| || |||||||| ||||| ||||||||||| | | ||||| ||||| Sbjct 964379 GAGAGAGTTCTTCCATCTTCTAGCTGTTTACCAGCAAAAATCAAACGTTGTTGGTCAGGG 964438 Query 104450 GGTATTCCTTCTTTATCCTGAATCTT 104475 || ||||||||||| || |||||||| Sbjct 964439 GGAATTCCTTCTTTGTCTTGAATCTT 964464 >seq87 Length=1479609 Score = 185 bits (204), Expect = 2e-41 Identities = 155/190 (82%), Gaps = 0/190 (0%) Strand=Plus/Plus Query 104370 CTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAA 104429 |||| |||||||||||||| |||| ||| | || ||||||| ||| ||||||||||||| Sbjct 253100 CTTTTTGAATATTATAGTCCGATAAAGTACGTCCATCTTCTAATTGCTTTCCAGCAAAAA 253159 Query 104430 TTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTT 104489 | || | || |||||||| ||||||||||||||||||||||| || ||||| ||||||| Sbjct 253160 TAAGACGTTGCTGATCAGGTGGTATTCCTTCTTTATCCTGAATTTTAGCTTTCACATTTT 253219 Query 104490 CTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAA 104549 ||| ||||| | |||||| || || || ||||| ||||| || | ||||| |||| Sbjct 253220 CTATAGTATCTGATGCTTCTACTTCAAGAGTGATAGTTTTACCCGTCAAAGTTTTCACAA 253279 Query 104550 ATATCTGCAT 104559 |||||||||| Sbjct 253280 ATATCTGCAT 253289 >seq2544 Length=277 Score = 174 bits (192), Expect = 4e-38 Identities = 164/209 (78%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 104351 ACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCT 104410 || ||||| | |||||||||||| |||||||| || || || ||||| | || ||||| Sbjct 264 ACAAGATGAAGTGTAGATTCTTTTTGAATATTGTAATCGGAAAGAGTACGGCCATCTTCC 205 Query 104411 AGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGA 104470 | || || |||||||| || || ||||||||||| ||||| || ||||| ||||| ||| Sbjct 204 AACTGCTTACCAGCAAAGATCAGTCTCTGTTGATCCGGAGGAATACCTTCCTTATCTTGA 145 Query 104471 ATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTA 104530 || || | ||| |||||||| | ||||| || ||| || |||| ||||| || || Sbjct 144 ATTTTAGTTTTAACATTTTCAATTGTATCAGAAGCTTCAACTTCTAAAGTAATTGTTTTT 85 Query 104531 CCAGTAAGTGTTTTTACAAATATCTGCAT 104559 |||||||| |||||||||||||| ||||| Sbjct 84 CCAGTAAGAGTTTTTACAAATATTTGCAT 56 >seq1683 Length=220 Score = 161 bits (178), Expect = 2e-34 Identities = 160/207 (77%), Gaps = 0/207 (0%) Strand=Plus/Minus Query 104351 ACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCT 104410 || ||||| | |||||||||||| || |||||||| ||||| ||||| | ||| ||||| Sbjct 207 ACAAGATGAAGTGTAGATTCTTTTTGGATATTATAATCAGAAAGAGTACGACCATCTTCC 148 Query 104411 AGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGA 104470 || ||||| ||||||||||| | || ||||| ||||| || || |||||||| || ||| Sbjct 147 AGCTGTTTACCAGCAAAAATCAATCTTTGTTGGTCAGGGGGAATACCTTCTTTGTCTTGA 88 Query 104471 ATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTA 104530 || || || || |||||||| | ||||| || ||| || || || |||||||| || Sbjct 87 ATTTTAGCCTTAACATTTTCAATAGTATCAGAAGCTTCAACTTCAAGAGTAATAGTTTTT 28 Query 104531 CCAGTAAGTGTTTTTACAAATATCTGC 104557 || ||||| || || || || || ||| Sbjct 27 CCTGTAAGAGTCTTGACGAAAATTTGC 1 >seq65 Length=484858 Score = 120 bits (132), Expect = 7e-22 Identities = 93/111 (84%), Gaps = 0/111 (0%) Strand=Plus/Minus Query 104348 AGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCT 104407 ||||| | ||||||||||||||| |||||||||||||| || || || || ||||| ||| Sbjct 17062 AGTACCAAATGTAATGTAGATTCCTTCTGAATATTATAATCTGAAAGTGTCCTACCATCT 17003 Query 104408 TCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCT 104458 || | ||||||||||||||| |||| || |||||| |||| || |||||| Sbjct 17002 TCCAATTGTTTTCCAGCAAAGATTAATCTTTGTTGACCAGGTGGAATTCCT 16952 Score = 95.1 bits (104), Expect = 3e-14 Identities = 87/109 (80%), Gaps = 1/109 (1%) Strand=Plus/Minus Query 104452 TATT-CCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCTA 104510 |||| ||||||||||| ||||| |||||||| |||||||| | ||||| | ||| | Sbjct 16895 TATTACCTTCTTTATCTTGAATTTTTGCTTTAACATTTTCAATAGTATCTGATGCTTCGA 16836 Query 104511 CCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559 | || || |||||||| || ||||| || || || |||||||||||||| Sbjct 16835 CTTCAAGAGTAATAGTTTTGCCAGTTAGAGTCTTCACAAATATCTGCAT 16787 >seq348 Length=983679 Score = 98.7 bits (108), Expect = 2e-15 Identities = 120/164 (73%), Gaps = 0/164 (0%) Strand=Plus/Minus Query 238527 AATGATAGAAGAAAATATATTTACTCTTTAAAACAGCTCGAGAGAGCCGAAACTCACGAT 238586 || |||| |||||||||||| || | |||||| || | || | | |||||||| ||| Sbjct 639905 AAAGATAAAAGAAAATATATATATTTTTTAAATCATTTGGAAAATTCAGAAACTCATGAT 639846 Query 238587 CCCCTATGGAATTCCGCCCAGATACAAATGGTAAGACTAGGCAAAATGCATAGTTTCTTA 238646 | |||||| | || | |||||||||| | |||| || |||||| | || ||| Sbjct 639845 GATTTGTGGAATGCATGTCAAAATCAAATGGTAACAATAGGAAAGATGCATGGGTTTTTA 639786 Query 238647 CGAATGTATTGGGCTAAAAAGATACTTGAATGGACTAGATCTCC 238690 ||||||||||||| || || ||| | ||||||||| | |||| Sbjct 639785 AGAATGTATTGGGCAAAGAAAATATTAGAATGGACTGAAACTCC 639742 Score = 86.0 bits (94), Expect = 1e-11 Identities = 83/107 (78%), Gaps = 0/107 (0%) Strand=Plus/Minus Query 238765 TAGGTTGTATGTGGTCAATATGTGGATTACACGATAGGGCATGGTCTGAGAGACCTATAT 238824 |||||||||||||||| || ||||| | || ||| | ||| | || ||| ||||| Sbjct 639567 TAGGTTGTATGTGGTCTATCTGTGGTGTCCATGATCATGGTTGGCCAGAAAGAGATATAT 639508 Query 238825 TTGGAAAAGTTAGATACATGAATTATGAAGGAACTAAGAAAAAATTT 238871 |||||||| ||||||| |||||||||||||| ||| ||||||| Sbjct 639507 TTGGAAAAATTAGATATATGAATTATGAAGGTTGTAAACGAAAATTT 639461 >seq50 Length=3512070 Score = 93.3 bits (102), Expect = 1e-13 Identities = 121/167 (72%), Gaps = 3/167 (2%) Strand=Plus/Minus Query 269069 TGTGTGAGaaaaaaaTCTGAATGGGCTCTGAAATGGATAAACGAT---AGCGCGCCTTAC 269125 ||||| ||||||| || | ||||| | || ||||||||| || || || ||| Sbjct 996316 TGTGTTGCAAAAAAAGCTCATTGGGCGTTAAATTGGATAAACCATGAAAGTGCTACTTTT 996257 Query 269126 GGAGAAAGGTTAGTTGCTTTTGCCGCTGTAGAAGGTATATTCTTTTCGGGGTCTTTTGCC 269185 ||| | | ||||||||||| || ||||||||||| |||||| || ||| || Sbjct 996256 CCTGAACGTGTGGTTGCTTTTGCTGCAGTAGAAGGTATTTTCTTTAGTGGTAGTTTCGCT 996197 Query 269186 GCTATCTTTTGGTTGAAGAAAAGAGGCCTTATGCCAGGATTAACTTT 269232 ||||| || ||||| || || ||||| |||||||||||| | || || Sbjct 996196 GCTATTTTCTGGTTAAAAAAGAGAGGTCTTATGCCAGGACTTACATT 996150 >seq69 Length=3598413 Score = 87.8 bits (96), Expect = 4e-12 Identities = 141/201 (70%), Gaps = 4/201 (2%) Strand=Plus/Plus Query 165134 GATCCTGTTTTACATATAGAGCTAAGAAGATGGGCAGATATGATGTTGATAGCACCCTTA 165193 |||||||| || ||||| || || | |||||| ||| | | || || || || ||| Sbjct 701971 GATCCTGTATTGCATATTGATTTAGTGAAATGGGCTGATTTATTTTTAATTGCTCCATTA 702030 Query 165194 ACAGCAAACAGTTTAGCGAAGATAGCTAACGGTATCTGTAATAACTTGTTAACGTGTATA 165253 || || | | | | || ||||||| ||||| ||| |||| | ||||| ||| | Sbjct 702031 GATGCTAATACTCTTGGTAAAATAGCTAGTGGTATATGTGATAATATATTAACTTGTGTT 702090 Query 165254 GTTAGAGCGTGGAAT--ATTAATAAACCTTTACTTTTCTGTCCAGCTATGAATACACTTA 165311 | | || ||| || ||||| | ||||| | || ||||| || ||||||||| | Sbjct 702091 GCACGTGCCTGGGATCCATTAA--AGCCTTTGGTCTTTTGTCCTGCCATGAATACAAAAA 702148 Query 165312 TGTGGGAACATCCTATTACTG 165332 |||||||||||||| |||||| Sbjct 702149 TGTGGGAACATCCTGTTACTG 702169 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1151338800740320