Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Apis_20dorsata_20[refseq_20GCF_5F000469605.1_202013-09-24] 4,040 sequences; 230,340,171 total letters Query= NC_006883.2 Length=252401 Score E Sequences producing significant alignments: (Bits) Value seq289 84.2 4e-11 >seq289 Length=151989 Score = 84.2 bits (92), Expect = 4e-11 Identities = 156/229 (68%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 193881 GCAAAGTTGTATGGTTATTGGATCATCAAGAATTATCGTGAGTCATATGGATTCCACGCT 193940 ||||| || ||| ||| |||||| | | |||||| | || ||||| | ||| Sbjct 5622 GCAAAATTATATAGTTTTTGGATTGTAATAAATTATAGAGAAGCATATAATATGTTTGCT 5563 Query 193941 AGTTCTGGTATTCTCTTCAATCACGAATCTCCAAGAAGAGGTGAGACATTTGTAACTCGT 194000 || ||||||| | || ||||| || ||| | ||||| |||| ||||| || | Sbjct 5562 TGTAATGGTATTTTATTTAATCATGAGAGTCCTCGTAGAGGAGAGAATTTTGTTACAAGA 5503 Query 194001 AAGATTACACAAGGTTTATCTAAGATCTCTGTTGGATTACAGAAGATTCTTTATCTTGGT 194060 || | || | | || | ||||| | |||| ||||| | |||||| | | || Sbjct 5502 AAAGTGACTAGATCTATAGCAAAGATACATCTTGGTTTACAAGATATTCTTGAATTAGGA 5443 Query 194061 AATCTTAATGCTAAGAGGGATTGGGGACACGCAAAGGATTATGTTGAAG 194109 ||| | ||||||| | ||||||||||| ||||| ||||||||||||| Sbjct 5442 AATTTAGATGCTAAACGAGATTGGGGACATGCAAAAGATTATGTTGAAG 5394 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 807514418462400