Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Apis_20dorsata_20[refseq_20GCF_5F000469605.1_202013-09-24] 4,040 sequences; 230,340,171 total letters Query= NC_008953.1 Length=3935 Score E Sequences producing significant alignments: (Bits) Value seq850 78.8 2e-11 >seq850 Length=279786 Score = 78.8 bits (86), Expect = 2e-11 Identities = 100/138 (72%), Gaps = 0/138 (0%) Strand=Plus/Minus Query 3367 TGTACTTTTCACAAATACGGTCCTTCGGGCTCCCTGGAAAACTACGAGGGACTCTGCATC 3426 ||||| || || ||||| ||| | || || | || | || | ||| || |||||| | Sbjct 163597 TGTACATTCCATAAATATGGTGCGTCCGGTACAGTGCAGAAATTCGATGGTCTCTGCGTA 163538 Query 3427 CTCCCGGAGAACGTGGTCAACGAGAAGATCTACATTTTCCTCTGGTTCTGGTTCTACGTG 3486 || ||| |||| | ||||| |||||||| ||| | || ||||||||||||||| | | Sbjct 163537 CTACCGTTGAACATCGTCAATGAGAAGATTTACGTGTTTCTCTGGTTCTGGTTCATCATC 163478 Query 3487 CTAGCCATCATCAGCGGT 3504 ||| || | | |||||| Sbjct 163477 CTATCCGTGTTAAGCGGT 163460 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 12479448540000