Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Apis_20dorsata_20[refseq_20GCF_5F000469605.1_202013-09-24] 4,040 sequences; 230,340,171 total letters Query= NC_015280.1 Length=181044 Score E Sequences producing significant alignments: (Bits) Value seq57 89.7 6e-13 >seq57 Length=445469 Score = 89.7 bits (98), Expect = 6e-13 Identities = 102/137 (74%), Gaps = 0/137 (0%) Strand=Plus/Minus Query 153288 TACACTCCCTATCAAGCTGAGATATCTCAGGGAAGATTGGAAGCTTTATTCAATTACCAA 153347 || || || |||||| | || || || || || ||| | |||| | |||| ||||||||| Sbjct 158565 TATACACCATATCAACCAGAAATTTCACAAGGCAGACTTGAAGGTCTATTGAATTACCAA 158506 Query 153348 ACGCTCATCACAGAACTTACAGGATTACCAATAGCAAACGCATCTCTATTAGATGAAGCA 153407 || | || || | || ||| | |||||| ||||||||||| |||||||||| Sbjct 158505 ACAATGATATGTGATTTAACTGGAATGGAAATAGCGAACGCATCTCTTTTAGATGAAGGT 158446 Query 153408 ACTGCAGCAGCAGAAGC 153424 |||||||||||||| || Sbjct 158445 ACTGCAGCAGCAGAGGC 158429 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 579183549753600