Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Apis_20dorsata_20[refseq_20GCF_5F000469605.1_202013-09-24] 4,040 sequences; 230,340,171 total letters Query= NC_015780.1 Length=205791 Score E Sequences producing significant alignments: (Bits) Value seq4 114 2e-20 seq64 87.8 2e-12 >seq4 Length=912327 Score = 114 bits (126), Expect = 2e-20 Identities = 134/181 (74%), Gaps = 0/181 (0%) Strand=Plus/Plus Query 104867 GAATTATTATGGGTGATGAAAGGTTTAACAAATTCTAACTTGTTAAATGAAATTGGTGTT 104926 ||||| |||||| | || ||||| | |||||| | || ||| |||| | |||| Sbjct 866596 GAATTGTTATGGTTTATTAAAGGATCCACAAATGCAAAGAAACTAAGCGAAAAAGATGTT 866655 Query 104927 AAAGTATGGAATGATAATGGTTCACGTAAGTTTTTAGATTCTTGTGGATTTCACTTTCGA 104986 | | ||| ||| ||| |||||||| |||| |||||||||||||| ||| | | Sbjct 866656 CATATTTGGGATGCAAATAGTTCACGTGAGTTCTTAGATTCTTGTGGTTTTACAGATAGG 866715 Query 104987 AAAGAAGGTGATTTAGGACCAATTTATGGATTTCAATGGAGACATGCTGGAGCTCAATAT 105046 ||||||| |||||||| || |||||||||||||||||||||||| ||| || |||| Sbjct 866716 GAAGAAGGAGATTTAGGTCCTATTTATGGATTTCAATGGAGACATTTTGGTGCAACATAT 866775 Query 105047 A 105047 | Sbjct 866776 A 866776 >seq64 Length=711803 Score = 87.8 bits (96), Expect = 2e-12 Identities = 123/170 (72%), Gaps = 2/170 (1%) Strand=Plus/Minus Query 126591 CGTATACCAGAAATTGGAGACAAATTTTGTTCTGGA-ATGGCCCAAAAAGGAACTTGTGG 126649 ||||| ||| |||| || || |||||| ||| | |||| | ||||||| |||||||| Sbjct 22266 CGTATTCCACAAATCGGTGATAAATTTGCTTCACGTCATGGAC-AAAAAGGTACTTGTGG 22208 Query 126650 TATGATTTATGCACAAGAAGATATGCCGTTTACACAATCAGGTATGACCCCCGATATTAT 126709 || ||| |||||| |||||||| ||| || |||| | || || |||||||| Sbjct 22207 AATTCAATATAGACAAGAGGATATGCCATTTTCATGTGAAGGTCTTACACCAGATATTAT 22148 Query 126710 AATTAATCCAAATTGTATACCGTCAAGAATGACCATAAATCAAATAATTG 126759 ||||||||| || ||| || ||| | ||||| || ||| |||||| Sbjct 22147 AATTAATCCTCATGCTATTCCATCACGTATGACTATTGGTCACTTAATTG 22098 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 658369950638400