Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Apis_20dorsata_20[refseq_20GCF_5F000469605.1_202013-09-24] 4,040 sequences; 230,340,171 total letters Query= NC_021248.1 Length=307691 Score E Sequences producing significant alignments: (Bits) Value seq108 208 2e-48 seq31 190 4e-43 seq87 170 4e-37 seq2544 152 1e-31 seq1683 136 8e-27 seq65 116 7e-21 seq50 109 1e-18 seq737 86.0 1e-11 >seq108 Length=811940 Score = 208 bits (230), Expect = 2e-48 Identities = 184/230 (80%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 192307 ATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCA 192366 || |||||||| | ||| ||||||||||||| || | |||||| |||||||||||| Sbjct 251191 ATTCCACCTCTCAAACGCAATACTAAATGTAGTGTTGACTCTTTTTGAATATTATAATCA 251250 Query 192367 GATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGT 192426 |||||||| ||| |||| || | |||||||||||||||||| ||||| || ||||| ||| Sbjct 251251 GATAATGTACGTCCATCTTCTAGTTGTTTACCAGCAAAGATCAATCTTTGCTGATCTGGT 251310 Query 192427 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCT 192486 || |||||||| || ||||| ||||| ||||||||| || | |||||| | ||| Sbjct 251311 GGAATTCCTTCCTTGTCTTGAATTTTCGCTTTTACATTTTCAATGGTATCTGAGGCCTCT 251370 Query 192487 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCAT 192536 || || ||||| || |||||||| || |||||||| | ||| |||||||| Sbjct 251371 ACCTCCAGAGTTATTGTTTTACCTGTCAATGTTTTGACAAAGATCTGCAT 251420 Score = 183 bits (202), Expect = 6e-41 Identities = 179/231 (77%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 192307 ATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCA 192366 |||||||| | ||| || || || | ||| | |||| ||||| |||||||||||| Sbjct 250963 ATACCACCACGAAGTCGCAAAACAAGATGAAGTGTAGATTCTTTTTGAATATTATAATCA 251022 Query 192367 GATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGT 192426 || | ||| || |||| ||||||||||| |||||||| || |||||||||||||| || Sbjct 251023 GAAAGTGTACGACCATCTTCCAATTGTTTTCCAGCAAAAATCAATCTCTGTTGATCGGGA 251082 Query 192427 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCT 192486 || || ||||||||||| || |||||| ||| ||||| || | |||||| | ||| Sbjct 251083 GGAATACCTTCTTTATCCTGAATTTTAGCTTTAACATTTTCAATGGTATCTGAAGCTTCA 251142 Query 192487 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCATT 192537 ||||||| |||||| ||||| ||||| | |||||| | ||| || |||||| Sbjct 251143 ACTTCTAAAGTAATAGTTTTTCCAGTAAGTGTTTTGACAAAAATTTGCATT 251193 Score = 172 bits (190), Expect = 1e-37 Identities = 175/228 (77%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 192309 ACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCAGA 192368 |||||||| ||||| | ||| | || | ||| | ||||| |||||||||||||| Sbjct 248998 ACCACCTCGGAGACGAAGTACAAGGTGAAGAGTCGATTCTTTTTGAATATTATAATCAGA 249057 Query 192369 TAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGTGG 192428 | ||| ||| |||| ||||||||||| ||||||||||| ||||||||||||||||| || Sbjct 249058 AAGTGTACGTCCATCTTCCAATTGTTTTCCAGCAAAGATCAATCTCTGTTGATCAGGAGG 249117 Query 192429 TATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCTAC 192488 || |||||||| ||||| ||||| ||||||||| || | || || | ||| || Sbjct 249118 AATACCTTCTTTGTCTTGAATTTTTGCTTTTACATTTTCAATTGTGTCGGAAGCTTCAAC 249177 Query 192489 TTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCAT 192536 ||| |||||||| |||||||| || | || || | ||| || ||||| Sbjct 249178 TTCAAGAGTAATAGTTTTACCCGTGAGAGTCTTGACAAAAATTTGCAT 249225 Score = 172 bits (190), Expect = 1e-37 Identities = 176/230 (77%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 192307 ATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCA 192366 || |||||||| | ||| ||||||||||||| || | ||||| ||||||||||| Sbjct 250507 ATTCCACCTCTCAAACGCAATACTAAATGTAGTGTTGATTCTTTTTGAATATTATAATCC 250566 Query 192367 GATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGT 192426 || | ||| || |||| |||| |||||||||||||| || |||||||||||||| || Sbjct 250567 GAAAGTGTACGACCATCTTCCAGCTGTTTACCAGCAAAAATCAATCTCTGTTGATCGGGA 250626 Query 192427 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCT 192486 || || ||||||||||| || |||||| | || ||||| |||| ||| || | ||| Sbjct 250627 GGAATACCTTCTTTATCCTGAATTTTAGTCTTAACATTTTCAATAGTATCGGATGCTTCA 250686 Query 192487 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCAT 192536 ||||||| |||||| ||||| || || | || |||| || || ||||| Sbjct 250687 ACTTCTAAAGTAATAGTTTTTCCTGTAAGAGTCTTAACGAAAATTTGCAT 250736 Score = 158 bits (174), Expect = 2e-33 Identities = 173/230 (75%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 192307 ATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCA 192366 |||||||| | ||| || || || | ||| | |||| ||||| |||||||||||| Sbjct 249224 ATACCACCACGAAGTCGCAAAACAAGATGAAGTGTAGATTCTTTTTGGATATTATAATCG 249283 Query 192367 GATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGT 192426 || | || || |||| ||||| ||||||||||||||||| | ||||||||| ||||| Sbjct 249284 GAAAGAGTACGACCATCTTCCAACTGTTTACCAGCAAAGATCAGTCTCTGTTGGTCAGGC 249343 Query 192427 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCT 192486 || || |||||||| ||||| ||||| ||||||||| || | ||| | | ||| Sbjct 249344 GGAATACCTTCTTTGTCTTGAATTTTTGCTTTTACATTTTCAATGGCATCATAAGCTTCA 249403 Query 192487 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCAT 192536 ||||| |||||||| |||||||| || | || || | ||| || ||||| Sbjct 249404 ACTTCAAGAGTAATAGTTTTACCCGTGAGAGTCTTGACAAAAATTTGCAT 249453 Score = 140 bits (154), Expect = 6e-28 Identities = 169/230 (73%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 192307 ATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCA 192366 |||||||| | ||| |||| || | ||| | || | ||||| ||||| ||||| Sbjct 250735 ATACCACCACGAAGTCGTAGAACGAGATGGAGGGTTGATTCTTTTTGAATATTGTAATCG 250794 Query 192367 GATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGT 192426 || | || || |||| ||||||||||| ||||||||||| ||||||||||| ||||| Sbjct 250795 GAAAGAGTACGGCCATCTTCCAATTGTTTTCCAGCAAAGATCAATCTCTGTTGGTCAGGA 250854 Query 192427 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCT 192486 || || |||||||| ||||| || || ||||||||| || | ||| || | ||| Sbjct 250855 GGAATACCTTCTTTGTCTTGAATCTTGGCTTTTACATTTTCAATGGTATCGGAAGCTTCA 250914 Query 192487 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCAT 192536 ||||| |||||||| || || || || | ||||| | || || ||||| Sbjct 250915 ACTTCAAGAGTAATAGTCTTTCCCGTAAGAGTTTTGACGAAAATTTGCAT 250964 Score = 118 bits (130), Expect = 2e-21 Identities = 121/158 (77%), Gaps = 0/158 (0%) Strand=Plus/Plus Query 192307 ATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCA 192366 |||||||| | ||| || || || | ||| | |||| ||||| ||||| ||||| Sbjct 249452 ATACCACCACGAAGTCGCAAAACAAGATGAAGTGTAGATTCTTTTTGAATATTGTAATCG 249511 Query 192367 GATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGT 192426 || | || || |||| ||||| ||||||||||||||||| | ||||||||| ||||| Sbjct 249512 GAAAGAGTACGACCATCTTCCAACTGTTTACCAGCAAAGATCAGTCTCTGTTGGTCAGGC 249571 Query 192427 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATT 192464 || || |||||||| ||||| ||||| ||||||||| Sbjct 249572 GGAATACCTTCTTTGTCTTGAATTTTTGCTTTTACATT 249609 >seq31 Length=1439309 Score = 190 bits (210), Expect = 4e-43 Identities = 180/230 (78%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 192307 ATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCA 192366 || || |||| ||| | ||||| ||||| | ||||| ||||| ||||||||||| Sbjct 961505 ATTCCTCCTCGAAGTCTCAATACCAAATGAAGAGTAGATTCTTTCTGAATATTATAATCT 961564 Query 192367 GATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGT 192426 || | ||||| | |||| || | |||||| ||||||||||| |||| || |||||||| Sbjct 961565 GAGAGTGTTCTTCCATCTTCAAGTTGTTTTCCAGCAAAGATCAATCGTTGCTGATCAGGA 961624 Query 192427 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCT 192486 || ||||||||||||||||| || ||| |||||||| ||| | |||||| | ||| Sbjct 961625 GGAATTCCTTCTTTATCTTGAATCTTAGCCTTTACATTCTCTATTGTATCTGAAGCTTCA 961684 Query 192487 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCAT 192536 ||||| ||||| |||||||| ||||||| ||||||| ||| |||||||| Sbjct 961685 ACTTCAAGAGTGATGGTTTTTCCAGTTAGGGTTTTAACAAAAATCTGCAT 961734 Score = 154 bits (170), Expect = 3e-32 Identities = 172/230 (75%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 192307 ATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCA 192366 || || |||| ||| | || |||| || | |||| ||||| || |||||||| Sbjct 964091 ATTCCTCCTCGAAGTCTCAACACTAGGTGAAGTGTAGATTCTTTCTGAATGTTATAATCT 964150 Query 192367 GATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGT 192426 || | |||| | |||| || | ||||||||||||||||||||| | |||||||| || Sbjct 964151 GAAAGAGTTCTTCCATCTTCTAGTTGTTTACCAGCAAAGATTAAACGTTGTTGATCTGGA 964210 Query 192427 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCT 192486 || ||||||||||||||||| || ||| ||| ||||| ||| | ||||| | ||| Sbjct 964211 GGAATTCCTTCTTTATCTTGAATCTTAGCTTTAACATTCTCTATTGTGTCTGAAGCTTCA 964270 Query 192487 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCAT 192536 ||||||| |||||||| |||||||| | ||||| | ||| || ||||| Sbjct 964271 ACTTCTAAGGTAATGGTCTTACCAGTGAGAGTTTTGACAAAGATTTGCAT 964320 Score = 150 bits (166), Expect = 4e-31 Identities = 172/231 (74%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 192307 ATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCA 192366 || || || | ||| || ||||| | ||| | ||||| ||||| |||||||||||| Sbjct 960756 ATTCCTCCGCGAAGTCGCAATACCAGATGAAGAGTAGATTCTTTCTGAATATTATAATCA 960815 Query 192367 GATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGT 192426 || | ||||| | |||| || | ||||| |||||||| || || | ||||||||||| Sbjct 960816 GAGAGTGTTCTTCCATCTTCAAGCTGTTTGCCAGCAAAAATCAAACGTTGTTGATCAGGA 960875 Query 192427 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCT 192486 || ||||||||||||||||| || ||| ||||| || ||| | ||| || | ||| Sbjct 960876 GGAATTCCTTCTTTATCTTGAATCTTAGCCTTTACGTTCTCTATCGTATCCGAAGCTTCA 960935 Query 192487 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCATT 192537 ||||| || ||||| || || ||||| | ||||| | ||| || |||||| Sbjct 960936 ACTTCAAGTGTAATAGTCTTTCCAGTGAGAGTTTTGACAAAGATTTGCATT 960986 Score = 150 bits (166), Expect = 4e-31 Identities = 157/206 (76%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 192307 ATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCA 192366 || || |||| ||| | ||||| ||||| | ||||| ||||| ||||||||||| Sbjct 960984 ATTCCTCCTCGAAGTCTCAATACCAAATGAAGAGTAGATTCTTTCTGAATATTATAATCT 961043 Query 192367 GATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGT 192426 || | ||||| | |||| || | |||||| |||||||| || |||| ||| |||||||| Sbjct 961044 GAGAGTGTTCTTCCATCTTCAAGTTGTTTTCCAGCAAAAATCAATCGCTGCTGATCAGGA 961103 Query 192427 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCT 192486 || ||||||||||||||||| |||||| ||||| || ||| | ||| || | ||| Sbjct 961104 GGAATTCCTTCTTTATCTTGAATTTTAGCCTTTACGTTCTCTATCGTATCCGAAGCTTCA 961163 Query 192487 ACTTCTAGAGTAATGGTTTTACCAGT 192512 ||||| || ||||| || || ||||| Sbjct 961164 ACTTCAAGTGTAATAGTCTTTCCAGT 961189 Score = 150 bits (166), Expect = 4e-31 Identities = 167/220 (76%), Gaps = 2/220 (1%) Strand=Plus/Plus Query 192330 TAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCAGATAATGTTCGTTCATCATCCAA 192389 || ||| | ||||| ||||| ||||||||||| || | ||||| |||| || | Sbjct 964776 TAGATGAAGAGTAGATTCTTTTTGAATATTATAATCTGAGAGTGTTCTACCATCTTCAAG 964835 Query 192390 TTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGTGGTATTCCTTCTTTATCTTGTAT 192449 |||||| |||||||| || || | |||||||| ||||| ||||| ||||||||||| || Sbjct 964836 TTGTTTTCCAGCAAAAATCAAACGTTGTTGATCTGGTGGAATTCCCTCTTTATCTTGAAT 964895 Query 192450 TTTATTTTTTACATTAGTTATAGAATCTGACGATTCTACTTCTAGAGTAATGGTTTTACC 192509 ||| |||||||| ||| | ||||| | ||| ||||||| || || ||||| || Sbjct 964896 CTTAGCCTTTACATTCTCTATTGTGTCTGAAGCTTCAACTTCTAAGGTGATAGTTTTTCC 964955 Query 192510 AGTTAATGTTTTAATAAATATCTGCA-TTTTAT-TAGAAA 192547 ||||| || |||| ||| ||||||| |||||| |||||| Sbjct 964956 TGTTAAAGTCTTAACAAAGATCTGCATTTTTATGTAGAAA 964995 Score = 147 bits (162), Expect = 4e-30 Identities = 171/231 (74%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 192307 ATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCA 192366 || || |||| ||| | ||||| ||||| | ||||| ||||| ||||||||||| Sbjct 961277 ATTCCTCCTCGAAGTCTCAATACCAAATGAAGAGTAGATTCTTTCTGAATATTATAATCT 961336 Query 192367 GATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGT 192426 || | ||||| | |||| || | ||||||||||||||| || || | ||||| ||||| Sbjct 961337 GAGAGTGTTCTTCCATCTTCTAGTTGTTTACCAGCAAAAATCAAACGTTGTTGGTCAGGG 961396 Query 192427 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCT 192486 || ||||||||||| ||||| || ||| ||||| || ||| | ||| || | ||| Sbjct 961397 GGAATTCCTTCTTTGTCTTGAATCTTAGCCTTTACGTTCTCTATCGTATCCGAAGCTTCA 961456 Query 192487 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCATT 192537 || || || ||||| || || ||||| | ||||| | ||| || |||||| Sbjct 961457 ACGTCAAGTGTAATAGTCTTTCCAGTGAGAGTTTTGACAAAGATTTGCATT 961507 Score = 145 bits (160), Expect = 2e-29 Identities = 169/228 (74%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 192310 CCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCAGAT 192369 || |||| ||| | ||||| || || | |||| ||||| |||||| ||||| | Sbjct 960531 CCTCCTCGAAGTCTCAATACCAAGTGCAGTGTAGATTCTTTTTGGATATTGTAATCTAAG 960590 Query 192370 AATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGTGGT 192429 | ||||| | |||| || | |||||| |||||||| || |||| || |||||||| || Sbjct 960591 AGTGTTCTTCCATCTTCAAGTTGTTTTCCAGCAAAAATCAATCGTTGCTGATCAGGAGGA 960650 Query 192430 ATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCTACT 192489 ||||||||||||||||| || ||| |||||| || ||| | ||| || | ||| ||| Sbjct 960651 ATTCCTTCTTTATCTTGAATCTTAGCTTTTACGTTCTCTATTGTATCCGAAGCTTCAACT 960710 Query 192490 TCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCATT 192537 || || ||||| || || ||||| | ||||| | ||| || |||||| Sbjct 960711 TCAAGTGTAATAGTCTTTCCAGTAAGAGTTTTGACAAAGATTTGCATT 960758 Score = 107 bits (118), Expect = 4e-18 Identities = 112/147 (76%), Gaps = 0/147 (0%) Strand=Plus/Plus Query 192307 ATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCA 192366 ||||| |||||||| | || |||||||| | |||| || || |||||||||||| Sbjct 964319 ATACCTCCTCTAAGTCTCAACACTAAATGGAGTGTAGATTCCTTTTGGATATTATAATCT 964378 Query 192367 GATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGT 192426 || | |||| | |||| || | |||||||||||||| || || | ||||| ||||| Sbjct 964379 GAGAGAGTTCTTCCATCTTCTAGCTGTTTACCAGCAAAAATCAAACGTTGTTGGTCAGGG 964438 Query 192427 GGTATTCCTTCTTTATCTTGTATTTTA 192453 || ||||||||||| ||||| || ||| Sbjct 964439 GGAATTCCTTCTTTGTCTTGAATCTTA 964465 >seq87 Length=1479609 Score = 170 bits (188), Expect = 4e-37 Identities = 147/182 (81%), Gaps = 0/182 (0%) Strand=Plus/Plus Query 192355 ATATTATAATCAGATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTC 192414 |||||||| || ||||| || ||| |||| || ||||| || |||||||| || | | Sbjct 253108 ATATTATAGTCCGATAAAGTACGTCCATCTTCTAATTGCTTTCCAGCAAAAATAAGACGT 253167 Query 192415 TGTTGATCAGGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAA 192474 || |||||||||||||||||||||||||| || |||||| ||| ||||| ||||| | Sbjct 253168 TGCTGATCAGGTGGTATTCCTTCTTTATCCTGAATTTTAGCTTTCACATTTTCTATAGTA 253227 Query 192475 TCTGACGATTCTACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGC 192534 ||||| | ||||||||| ||||| || |||||||| || || ||||| | |||||||||| Sbjct 253228 TCTGATGCTTCTACTTCAAGAGTGATAGTTTTACCCGTCAAAGTTTTCACAAATATCTGC 253287 Query 192535 AT 192536 || Sbjct 253288 AT 253289 >seq2544 Length=277 Score = 152 bits (168), Expect = 1e-31 Identities = 165/219 (75%), Gaps = 0/219 (0%) Strand=Plus/Minus Query 192318 AAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCAGATAATGTTCG 192377 ||| || || || | ||| | |||| ||||| ||||| ||||| || | || || Sbjct 274 AAGTCGCAAAACAAGATGAAGTGTAGATTCTTTTTGAATATTGTAATCGGAAAGAGTACG 215 Query 192378 TTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGTGGTATTCCTTC 192437 |||| ||||| || |||||||||||||| | |||||||||||| || || || ||||| Sbjct 214 GCCATCTTCCAACTGCTTACCAGCAAAGATCAGTCTCTGTTGATCCGGAGGAATACCTTC 155 Query 192438 TTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCTACTTCTAGAGT 192497 |||||||| |||||| |||| ||||| || | ||| || | ||| ||||||| ||| Sbjct 154 CTTATCTTGAATTTTAGTTTTAACATTTTCAATTGTATCAGAAGCTTCAACTTCTAAAGT 95 Query 192498 AATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCAT 192536 ||| ||||| ||||| | ||||| | |||||| ||||| Sbjct 94 AATTGTTTTTCCAGTAAGAGTTTTTACAAATATTTGCAT 56 >seq1683 Length=220 Score = 136 bits (150), Expect = 8e-27 Identities = 147/195 (75%), Gaps = 0/195 (0%) Strand=Plus/Minus Query 192318 AAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCAGATAATGTTCG 192377 ||| || || || | ||| | |||| ||||| ||||||||||||||| | || || Sbjct 217 AAGTCGCAAAACAAGATGAAGTGTAGATTCTTTTTGGATATTATAATCAGAAAGAGTACG 158 Query 192378 TTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGTGGTATTCCTTC 192437 |||| |||| |||||||||||||| || ||||| ||||| ||||| || || ||||| Sbjct 157 ACCATCTTCCAGCTGTTTACCAGCAAAAATCAATCTTTGTTGGTCAGGGGGAATACCTTC 98 Query 192438 TTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCTACTTCTAGAGT 192497 ||| ||||| |||||| || ||||| |||| ||| || | ||| ||||| ||||| Sbjct 97 TTTGTCTTGAATTTTAGCCTTAACATTTTCAATAGTATCAGAAGCTTCAACTTCAAGAGT 38 Query 192498 AATGGTTTTACCAGT 192512 ||| ||||| || || Sbjct 37 AATAGTTTTTCCTGT 23 >seq65 Length=484858 Score = 116 bits (128), Expect = 7e-21 Identities = 102/127 (80%), Gaps = 0/127 (0%) Strand=Plus/Minus Query 192309 ACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCAGA 192368 |||||| || | ||||| ||| |||||||| |||| || || ||||||||||| || Sbjct 17078 ACCACCCCTTAAACGTAGTACCAAATGTAATGTAGATTCCTTCTGAATATTATAATCTGA 17019 Query 192369 TAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGTGG 192428 | ||| | |||| ||||||||||| ||||||||||||||||| |||||| ||||||| Sbjct 17018 AAGTGTCCTACCATCTTCCAATTGTTTTCCAGCAAAGATTAATCTTTGTTGACCAGGTGG 16959 Query 192429 TATTCCT 192435 |||||| Sbjct 16958 AATTCCT 16952 Score = 95.1 bits (104), Expect = 2e-14 Identities = 87/109 (80%), Gaps = 1/109 (1%) Strand=Plus/Minus Query 192429 TATT-CCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCTA 192487 |||| |||||||||||||| ||||| ||| ||||| |||| |||||| | ||| | Sbjct 16895 TATTACCTTCTTTATCTTGAATTTTTGCTTTAACATTTTCAATAGTATCTGATGCTTCGA 16836 Query 192488 CTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCAT 192536 |||| |||||||| ||||| ||||||| || || | |||||||||||| Sbjct 16835 CTTCAAGAGTAATAGTTTTGCCAGTTAGAGTCTTCACAAATATCTGCAT 16787 >seq50 Length=3512070 Score = 109 bits (120), Expect = 1e-18 Identities = 141/195 (72%), Gaps = 0/195 (0%) Strand=Plus/Plus Query 50106 ATTAATAAAGAATACATTTCAGAATGTACAGCTTCCATAGCTATTTGAAATGAATAAAAT 50165 ||||| |||||||||||||| ||||| ||| |||||| || | |||||| ||| || Sbjct 996458 ATTAACAAAGAATACATTTCTGAATGAACATTTTCCATGGCAACTTGAAAACCATAGAAA 996517 Query 50166 TGTCTTGCTTCTGAATACTGAACTTCGGAAAAGAATCGTTCAACTAAATTCTCAGATACA 50225 | ||| |||| || ||||| | ||||||||||| | ||||||| || Sbjct 996518 CAACGTGCCTCTGTTATTTGTACTTCTTGACTAAATCGTTCAACAAGATTCTCATTGACG 996577 Query 50226 ATACCATCAGATGCTGCGAAGAATGCTAAAACGTATTTAATAAAATGTTTTTCATTATCT 50285 || |||||||| ||||| || |||||||| || | ||||||||||||||| | | Sbjct 996578 ATTCCATCAGAAGCTGCAAAAAATGCTAAGACATGAGATATAAAATGTTTTTCACTGGCA 996637 Query 50286 TTTAAATTTTCCCAA 50300 ||||||| | |||| Sbjct 996638 GTTAAATTATTCCAA 996652 Score = 107 bits (118), Expect = 4e-18 Identities = 161/225 (72%), Gaps = 4/225 (2%) Strand=Plus/Plus Query 49846 CCTCGTCCCTAGATATAAATTCATTACTAAAAGTTAATCCTGGCATTAATCCTCTCTTTT 49905 |||| || ||||| |||| |||||| ||||| || | ||||||||| | |||||||||| Sbjct 996121 CCTCATCTCTAGAAATAAGTTCATTGCTAAATGTAAGTCCTGGCATAAGACCTCTCTTTT 996180 Query 49906 TAAGCCAAAATATTGATGCAAAACTACTAGAAAAGAATATACCCTCGACACACGCAAATG 49965 | | ||| || || | || ||||||| | |||||| ||||| || || ||||| | Sbjct 996181 TTAACCAGAAAATAGCAGCGAAACTACCACTAAAGAAAATACCTTCTACTGCAGCAAAAG 996240 Query 49966 CTATTATTCTTGCTCCAAACATTA--ATTTATCATCTAATATCCAATTTATAGCCCAATC 50023 | | | | | | ||| | || | || |||| ||||||||||| ||||||| Sbjct 996241 CAACCACACGTTCAGGAAA-AGTAGCACTT-TCATGGTTTATCCAATTTAACGCCCAATG 996298 Query 50024 TGCtttttttttGATAGAAGGTATATTTTCTATAGCTTTAAATAA 50068 ||||||||| | | | || | |||||| ||||| |||||||| Sbjct 996299 AGCTTTTTTTGCAACACATGGCAAATTTTCAATAGCGTTAAATAA 996343 >seq737 Length=218022 Score = 86.0 bits (94), Expect = 1e-11 Identities = 88/115 (77%), Gaps = 0/115 (0%) Strand=Plus/Minus Query 263631 TGTACATGTGATAGGAAAAATAATTGGATTACCAAAGGGATTACATGGATTTCATATACA 263690 ||| ||| | | |||||||||| |||| | |||| ||||||||||| || ||| |||| Sbjct 24060 TGTTCATATTACTGGAAAAATAAGTGGACTTACAAAAGGATTACATGGTTTCCATGTACA 24001 Query 263691 CGAATATGGAGATTTAAGCAATGGATGTACGTCAGCTGGTGAACATTATAATCCT 263745 ||| | ||||||||| | ||||| || || || | ||| ||||| ||||||| Sbjct 24000 TGAAAAAGGAGATTTACGAAATGGTTGCACATCTACCGGTCCACATTTTAATCCT 23946 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 984429040854000