Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Apis_20dorsata_20[refseq_20GCF_5F000469605.1_202013-09-24] 4,040 sequences; 230,340,171 total letters Query= NC_021249.1 Length=282895 Score E Sequences producing significant alignments: (Bits) Value seq108 183 5e-41 seq31 181 2e-40 seq87 168 1e-36 seq2544 147 4e-30 seq1683 143 5e-29 seq50 104 4e-17 seq737 100 5e-16 seq65 98.7 2e-15 >seq108 Length=811940 Score = 183 bits (202), Expect = 5e-41 Identities = 189/245 (77%), Gaps = 2/245 (1%) Strand=Plus/Plus Query 171840 ATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCT 171899 || |||||||| | || ||||||||||||| || | |||||| |||||||||||| Sbjct 251191 ATTCCACCTCTCAAACGCAATACTAAATGTAGTGTTGACTCTTTTTGAATATTATAATCA 251250 Query 171900 GATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGT 171959 ||||| | ||| | || || | ||||||||||||||| || ||||| || || || ||| Sbjct 251251 GATAATGTACGTCCATCTTCTAGTTGTTTACCAGCAAAGATCAATCTTTGCTGATCTGGT 251310 Query 171960 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCT 172019 || |||||||| || ||||| ||||| ||||||||| || |||||||| | ||| Sbjct 251311 GGAATTCCTTCCTTGTCTTGAATTTTCGCTTTTACATTTTCAATGGTATCTGAGGCCTCT 251370 Query 172020 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCAT-TTTAT-TAT 172077 || || ||||| || |||||||| || |||||||| | || |||||||| |||| | | Sbjct 251371 ACCTCCAGAGTTATTGTTTTACCTGTCAATGTTTTGACAAAGATCTGCATGATTATCTGT 251430 Query 172078 AAAAA 172082 ||||| Sbjct 251431 AAAAA 251435 Score = 174 bits (192), Expect = 3e-38 Identities = 177/231 (77%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 171840 ATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCT 171899 |||||||| | |||||| || || | ||| | |||| ||||| |||||||||||| Sbjct 250963 ATACCACCACGAAGTCGCAAAACAAGATGAAGTGTAGATTCTTTTTGAATATTATAATCA 251022 Query 171900 GATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGT 171959 || | | || | || ||||||||||| ||||||||||| ||||||||||| || || Sbjct 251023 GAAAGTGTACGACCATCTTCCAATTGTTTTCCAGCAAAAATCAATCTCTGTTGATCGGGA 251082 Query 171960 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCT 172019 || || ||||||||||| || |||||| ||| ||||| || |||||||| | ||| Sbjct 251083 GGAATACCTTCTTTATCCTGAATTTTAGCTTTAACATTTTCAATGGTATCTGAAGCTTCA 251142 Query 172020 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCATT 172070 ||||||| |||||| ||||| ||||| | |||||| | || || |||||| Sbjct 251143 ACTTCTAAAGTAATAGTTTTTCCAGTAAGTGTTTTGACAAAAATTTGCATT 251193 Score = 167 bits (184), Expect = 4e-36 Identities = 175/230 (76%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 171840 ATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCT 171899 || |||||||| | || ||||||||||||| || | ||||| |||||||||||| Sbjct 250507 ATTCCACCTCTCAAACGCAATACTAAATGTAGTGTTGATTCTTTTTGAATATTATAATCC 250566 Query 171900 GATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGT 171959 || | | || | || |||| ||||||||||||||||| ||||||||||| || || Sbjct 250567 GAAAGTGTACGACCATCTTCCAGCTGTTTACCAGCAAAAATCAATCTCTGTTGATCGGGA 250626 Query 171960 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCT 172019 || || ||||||||||| || |||||| | || ||||| |||||||| || | ||| Sbjct 250627 GGAATACCTTCTTTATCCTGAATTTTAGTCTTAACATTTTCAATAGTATCGGATGCTTCA 250686 Query 172020 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCAT 172069 ||||||| |||||| ||||| || || | || |||| ||| || ||||| Sbjct 250687 ACTTCTAAAGTAATAGTTTTTCCTGTAAGAGTCTTAACGAAAATTTGCAT 250736 Score = 154 bits (170), Expect = 3e-32 Identities = 172/230 (75%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 171840 ATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCT 171899 |||||||| | |||||||| || | ||| | || | ||||| |||||| ||||| Sbjct 250735 ATACCACCACGAAGTCGTAGAACGAGATGGAGGGTTGATTCTTTTTGAATATTGTAATCG 250794 Query 171900 GATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGT 171959 || | || || | || ||||||||||| |||||||| || ||||||||||||||||| Sbjct 250795 GAAAGAGTACGGCCATCTTCCAATTGTTTTCCAGCAAAGATCAATCTCTGTTGGTCAGGA 250854 Query 171960 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCT 172019 || || |||||||| ||||| || || ||||||||| || ||||| || | ||| Sbjct 250855 GGAATACCTTCTTTGTCTTGAATCTTGGCTTTTACATTTTCAATGGTATCGGAAGCTTCA 250914 Query 172020 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCAT 172069 ||||| |||||||| || || || || | ||||| | ||| || ||||| Sbjct 250915 ACTTCAAGAGTAATAGTCTTTCCCGTAAGAGTTTTGACGAAAATTTGCAT 250964 Score = 149 bits (164), Expect = 1e-30 Identities = 171/230 (74%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 171840 ATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCT 171899 |||||||| | |||||| || || | ||| | |||| ||||| ||||||||||| Sbjct 249224 ATACCACCACGAAGTCGCAAAACAAGATGAAGTGTAGATTCTTTTTGGATATTATAATCG 249283 Query 171900 GATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGT 171959 || | || || | || ||||| |||||||||||||| || | ||||||||||||||| Sbjct 249284 GAAAGAGTACGACCATCTTCCAACTGTTTACCAGCAAAGATCAGTCTCTGTTGGTCAGGC 249343 Query 171960 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCT 172019 || || |||||||| ||||| ||||| ||||||||| || | ||| | | ||| Sbjct 249344 GGAATACCTTCTTTGTCTTGAATTTTTGCTTTTACATTTTCAATGGCATCATAAGCTTCA 249403 Query 172020 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCAT 172069 ||||| |||||||| |||||||| || | || || | || || ||||| Sbjct 249404 ACTTCAAGAGTAATAGTTTTACCCGTGAGAGTCTTGACAAAAATTTGCAT 249453 Score = 145 bits (160), Expect = 1e-29 Identities = 169/228 (74%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 171842 ACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCTGA 171901 |||||||| || || | ||| | || | ||| | ||||| |||||||||||| || Sbjct 248998 ACCACCTCGGAGACGAAGTACAAGGTGAAGAGTCGATTCTTTTTGAATATTATAATCAGA 249057 Query 171902 TAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGTGG 171961 | | ||| | || ||||||||||| |||||||| || ||||||||||| ||||| || Sbjct 249058 AAGTGTACGTCCATCTTCCAATTGTTTTCCAGCAAAGATCAATCTCTGTTGATCAGGAGG 249117 Query 171962 TATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCTAC 172021 || |||||||| ||||| ||||| ||||||||| || || || || | ||| || Sbjct 249118 AATACCTTCTTTGTCTTGAATTTTTGCTTTTACATTTTCAATTGTGTCGGAAGCTTCAAC 249177 Query 172022 TTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCAT 172069 ||| |||||||| |||||||| || | || || | || || ||||| Sbjct 249178 TTCAAGAGTAATAGTTTTACCCGTGAGAGTCTTGACAAAAATTTGCAT 249225 Score = 123 bits (136), Expect = 5e-23 Identities = 122/158 (77%), Gaps = 0/158 (0%) Strand=Plus/Plus Query 171840 ATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCT 171899 |||||||| | |||||| || || | ||| | |||| ||||| |||||| ||||| Sbjct 249452 ATACCACCACGAAGTCGCAAAACAAGATGAAGTGTAGATTCTTTTTGAATATTGTAATCG 249511 Query 171900 GATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGT 171959 || | || || | || ||||| |||||||||||||| || | ||||||||||||||| Sbjct 249512 GAAAGAGTACGACCATCTTCCAACTGTTTACCAGCAAAGATCAGTCTCTGTTGGTCAGGC 249571 Query 171960 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATT 171997 || || |||||||| ||||| ||||| ||||||||| Sbjct 249572 GGAATACCTTCTTTGTCTTGAATTTTTGCTTTTACATT 249609 >seq31 Length=1439309 Score = 181 bits (200), Expect = 2e-40 Identities = 178/230 (77%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 171840 ATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCT 171899 || || |||| ||||| ||||| ||||| | ||||| ||||| ||||||||||||| Sbjct 961505 ATTCCTCCTCGAAGTCTCAATACCAAATGAAGAGTAGATTCTTTCTGAATATTATAATCT 961564 Query 171900 GATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGT 171959 || | | || | | || || | |||||| |||||||| || |||| || || ||||| Sbjct 961565 GAGAGTGTTCTTCCATCTTCAAGTTGTTTTCCAGCAAAGATCAATCGTTGCTGATCAGGA 961624 Query 171960 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCT 172019 || ||||||||||||||||| || ||| |||||||| ||| |||||||| | ||| Sbjct 961625 GGAATTCCTTCTTTATCTTGAATCTTAGCCTTTACATTCTCTATTGTATCTGAAGCTTCA 961684 Query 172020 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCAT 172069 ||||| ||||| |||||||| ||||||| ||||||| || |||||||| Sbjct 961685 ACTTCAAGAGTGATGGTTTTTCCAGTTAGGGTTTTAACAAAAATCTGCAT 961734 Score = 156 bits (172), Expect = 8e-33 Identities = 158/206 (77%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 171840 ATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCT 171899 || || |||| ||||| ||||| ||||| | ||||| ||||| ||||||||||||| Sbjct 960984 ATTCCTCCTCGAAGTCTCAATACCAAATGAAGAGTAGATTCTTTCTGAATATTATAATCT 961043 Query 171900 GATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGT 171959 || | | || | | || || | |||||| ||||||||||| |||| ||| || ||||| Sbjct 961044 GAGAGTGTTCTTCCATCTTCAAGTTGTTTTCCAGCAAAAATCAATCGCTGCTGATCAGGA 961103 Query 171960 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCT 172019 || ||||||||||||||||| |||||| ||||| || ||| ||||| || | ||| Sbjct 961104 GGAATTCCTTCTTTATCTTGAATTTTAGCCTTTACGTTCTCTATCGTATCCGAAGCTTCA 961163 Query 172020 ACTTCTAGAGTAATGGTTTTACCAGT 172045 ||||| || ||||| || || ||||| Sbjct 961164 ACTTCAAGTGTAATAGTCTTTCCAGT 961189 Score = 156 bits (172), Expect = 8e-33 Identities = 173/231 (75%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 171840 ATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCT 171899 || || |||| ||||| ||||| ||||| | ||||| ||||| ||||||||||||| Sbjct 961277 ATTCCTCCTCGAAGTCTCAATACCAAATGAAGAGTAGATTCTTTCTGAATATTATAATCT 961336 Query 171900 GATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGT 171959 || | | || | | || || | |||||||||||||||||| || | ||||||||||| Sbjct 961337 GAGAGTGTTCTTCCATCTTCTAGTTGTTTACCAGCAAAAATCAAACGTTGTTGGTCAGGG 961396 Query 171960 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCT 172019 || ||||||||||| ||||| || ||| ||||| || ||| ||||| || | ||| Sbjct 961397 GGAATTCCTTCTTTGTCTTGAATCTTAGCCTTTACGTTCTCTATCGTATCCGAAGCTTCA 961456 Query 172020 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCATT 172070 || || || ||||| || || ||||| | ||||| | || || |||||| Sbjct 961457 ACGTCAAGTGTAATAGTCTTTCCAGTGAGAGTTTTGACAAAGATTTGCATT 961507 Score = 154 bits (170), Expect = 3e-32 Identities = 172/230 (75%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 171840 ATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCT 171899 || || |||| ||||| || |||| || | |||| ||||| ||| ||||||||| Sbjct 964091 ATTCCTCCTCGAAGTCTCAACACTAGGTGAAGTGTAGATTCTTTCTGAATGTTATAATCT 964150 Query 171900 GATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGT 171959 || | || || | | || || | ||||||||||||||| ||||| | ||||| || || Sbjct 964151 GAAAGAGTTCTTCCATCTTCTAGTTGTTTACCAGCAAAGATTAAACGTTGTTGATCTGGA 964210 Query 171960 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCT 172019 || ||||||||||||||||| || ||| ||| ||||| ||| || ||||| | ||| Sbjct 964211 GGAATTCCTTCTTTATCTTGAATCTTAGCTTTAACATTCTCTATTGTGTCTGAAGCTTCA 964270 Query 172020 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCAT 172069 ||||||| |||||||| |||||||| | ||||| | || || ||||| Sbjct 964271 ACTTCTAAGGTAATGGTCTTACCAGTGAGAGTTTTGACAAAGATTTGCAT 964320 Score = 145 bits (160), Expect = 1e-29 Identities = 158/210 (75%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 171863 TAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCTGATAAAGATCGTTCGTCATCCAA 171922 || ||| | ||||| ||||| ||||||||||||||| | | || | || || | Sbjct 964776 TAGATGAAGAGTAGATTCTTTTTGAATATTATAATCTGAGAGTGTTCTACCATCTTCAAG 964835 Query 171923 TTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGTGGTATTCCTTCTTTATCTTGTAT 171982 |||||| ||||||||||| || | ||||| || ||||| ||||| ||||||||||| || Sbjct 964836 TTGTTTTCCAGCAAAAATCAAACGTTGTTGATCTGGTGGAATTCCCTCTTTATCTTGAAT 964895 Query 171983 TTTATTTTTTACATTAGTTATAGTATCTGACGATTCTACTTCTAGAGTAATGGTTTTACC 172042 ||| |||||||| ||| || ||||| | ||| ||||||| || || ||||| || Sbjct 964896 CTTAGCCTTTACATTCTCTATTGTGTCTGAAGCTTCAACTTCTAAGGTGATAGTTTTTCC 964955 Query 172043 AGTTAATGTTTTAATGAATATCTGCATTTT 172072 ||||| || |||| || ||||||||||| Sbjct 964956 TGTTAAAGTCTTAACAAAGATCTGCATTTT 964985 Score = 141 bits (156), Expect = 2e-28 Identities = 170/231 (74%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 171840 ATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCT 171899 || || || | |||||| ||||| | ||| | ||||| ||||| |||||||||||| Sbjct 960756 ATTCCTCCGCGAAGTCGCAATACCAGATGAAGAGTAGATTCTTTCTGAATATTATAATCA 960815 Query 171900 GATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGT 171959 || | | || | | || || | ||||| ||||||||||| || | ||||| ||||| Sbjct 960816 GAGAGTGTTCTTCCATCTTCAAGCTGTTTGCCAGCAAAAATCAAACGTTGTTGATCAGGA 960875 Query 171960 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCT 172019 || ||||||||||||||||| || ||| ||||| || ||| ||||| || | ||| Sbjct 960876 GGAATTCCTTCTTTATCTTGAATCTTAGCCTTTACGTTCTCTATCGTATCCGAAGCTTCA 960935 Query 172020 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCATT 172070 ||||| || ||||| || || ||||| | ||||| | || || |||||| Sbjct 960936 ACTTCAAGTGTAATAGTCTTTCCAGTGAGAGTTTTGACAAAGATTTGCATT 960986 Score = 136 bits (150), Expect = 7e-27 Identities = 167/228 (73%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 171843 CCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCTGAT 171902 || |||| ||||| ||||| || || | |||| ||||| ||||| |||||| | Sbjct 960531 CCTCCTCGAAGTCTCAATACCAAGTGCAGTGTAGATTCTTTTTGGATATTGTAATCTAAG 960590 Query 171903 AAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGTGGT 171962 | | || | | || || | |||||| ||||||||||| |||| || || ||||| || Sbjct 960591 AGTGTTCTTCCATCTTCAAGTTGTTTTCCAGCAAAAATCAATCGTTGCTGATCAGGAGGA 960650 Query 171963 ATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCTACT 172022 ||||||||||||||||| || ||| |||||| || ||| ||||| || | ||| ||| Sbjct 960651 ATTCCTTCTTTATCTTGAATCTTAGCTTTTACGTTCTCTATTGTATCCGAAGCTTCAACT 960710 Query 172023 TCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCATT 172070 || || ||||| || || ||||| | ||||| | || || |||||| Sbjct 960711 TCAAGTGTAATAGTCTTTCCAGTAAGAGTTTTGACAAAGATTTGCATT 960758 Score = 116 bits (128), Expect = 7e-21 Identities = 114/147 (78%), Gaps = 0/147 (0%) Strand=Plus/Plus Query 171840 ATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCT 171899 ||||| |||||||||| || |||||||| | |||| || || |||||||||||| Sbjct 964319 ATACCTCCTCTAAGTCTCAACACTAAATGGAGTGTAGATTCCTTTTGGATATTATAATCT 964378 Query 171900 GATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGT 171959 || | || || | | || || | ||||||||||||||||| || | ||||||||||| Sbjct 964379 GAGAGAGTTCTTCCATCTTCTAGCTGTTTACCAGCAAAAATCAAACGTTGTTGGTCAGGG 964438 Query 171960 GGTATTCCTTCTTTATCTTGTATTTTA 171986 || ||||||||||| ||||| || ||| Sbjct 964439 GGAATTCCTTCTTTGTCTTGAATCTTA 964465 >seq87 Length=1479609 Score = 168 bits (186), Expect = 1e-36 Identities = 147/183 (80%), Gaps = 0/183 (0%) Strand=Plus/Plus Query 171887 AATATTATAATCTGATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCT 171946 ||||||||| || ||||||| ||| | || || ||||| || ||||||||||| | | Sbjct 253107 AATATTATAGTCCGATAAAGTACGTCCATCTTCTAATTGCTTTCCAGCAAAAATAAGACG 253166 Query 171947 CTGTTGGTCAGGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGT 172006 || || ||||||||||||||||||||||| || |||||| ||| ||||| |||||| Sbjct 253167 TTGCTGATCAGGTGGTATTCCTTCTTTATCCTGAATTTTAGCTTTCACATTTTCTATAGT 253226 Query 172007 ATCTGACGATTCTACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTG 172066 |||||| | ||||||||| ||||| || |||||||| || || ||||| | |||||||| Sbjct 253227 ATCTGATGCTTCTACTTCAAGAGTGATAGTTTTACCCGTCAAAGTTTTCACAAATATCTG 253286 Query 172067 CAT 172069 ||| Sbjct 253287 CAT 253289 >seq2544 Length=277 Score = 147 bits (162), Expect = 4e-30 Identities = 164/219 (75%), Gaps = 0/219 (0%) Strand=Plus/Minus Query 171851 AAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCTGATAAAGATCG 171910 |||||| || || | ||| | |||| ||||| |||||| ||||| || | || || Sbjct 274 AAGTCGCAAAACAAGATGAAGTGTAGATTCTTTTTGAATATTGTAATCGGAAAGAGTACG 215 Query 171911 TTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGTGGTATTCCTTC 171970 | || ||||| || ||||||||||| || | ||||||||| || || || || ||||| Sbjct 214 GCCATCTTCCAACTGCTTACCAGCAAAGATCAGTCTCTGTTGATCCGGAGGAATACCTTC 155 Query 171971 TTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCTACTTCTAGAGT 172030 |||||||| |||||| |||| ||||| || ||||| || | ||| ||||||| ||| Sbjct 154 CTTATCTTGAATTTTAGTTTTAACATTTTCAATTGTATCAGAAGCTTCAACTTCTAAAGT 95 Query 172031 AATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCAT 172069 ||| ||||| ||||| | ||||| | ||||| ||||| Sbjct 94 AATTGTTTTTCCAGTAAGAGTTTTTACAAATATTTGCAT 56 >seq1683 Length=220 Score = 143 bits (158), Expect = 5e-29 Identities = 162/217 (75%), Gaps = 0/217 (0%) Strand=Plus/Minus Query 171851 AAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCTGATAAAGATCG 171910 |||||| || || | ||| | |||| ||||| ||||||||||| || | || || Sbjct 217 AAGTCGCAAAACAAGATGAAGTGTAGATTCTTTTTGGATATTATAATCAGAAAGAGTACG 158 Query 171911 TTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGTGGTATTCCTTC 171970 | || |||| ||||||||||||||||| ||||| ||||||||||| || || ||||| Sbjct 157 ACCATCTTCCAGCTGTTTACCAGCAAAAATCAATCTTTGTTGGTCAGGGGGAATACCTTC 98 Query 171971 TTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCTACTTCTAGAGT 172030 ||| ||||| |||||| || ||||| |||||||| || | ||| ||||| ||||| Sbjct 97 TTTGTCTTGAATTTTAGCCTTAACATTTTCAATAGTATCAGAAGCTTCAACTTCAAGAGT 38 Query 172031 AATGGTTTTACCAGTTAATGTTTTAATGAATATCTGC 172067 ||| ||||| || || | || || | ||| || ||| Sbjct 37 AATAGTTTTTCCTGTAAGAGTCTTGACGAAAATTTGC 1 >seq50 Length=3512070 Score = 104 bits (114), Expect = 4e-17 Identities = 135/187 (72%), Gaps = 0/187 (0%) Strand=Plus/Plus Query 39416 AGAATACATTTCAGAATGTACAGCTTCCATAGCTATTTGAAATGAATAAAATTGCCTTGC 39475 |||||||||||| ||||| ||| |||||| || | |||||| ||| || | ||| Sbjct 996466 AGAATACATTTCTGAATGAACATTTTCCATGGCAACTTGAAAACCATAGAAACAACGTGC 996525 Query 39476 TTCTGAATACTGAACTTCGGAAAAGAATCGTTCAACTAAATTCTCAGATACAATACCATC 39535 |||| || ||||| | ||||||||||| | ||||||| || || ||||| Sbjct 996526 CTCTGTTATTTGTACTTCTTGACTAAATCGTTCAACAAGATTCTCATTGACGATTCCATC 996585 Query 39536 AGATGCTGCGAAGAATGCTAAAACATATTTAATAAAATGTTTTTCATTATCTTTTAAATT 39595 ||| ||||| || |||||||| |||| ||||||||||||||| | | ||||||| Sbjct 996586 AGAAGCTGCAAAAAATGCTAAGACATGAGATATAAAATGTTTTTCACTGGCAGTTAAATT 996645 Query 39596 TTCCCAA 39602 | |||| Sbjct 996646 ATTCCAA 996652 >seq737 Length=218022 Score = 100 bits (110), Expect = 5e-16 Identities = 91/115 (79%), Gaps = 0/115 (0%) Strand=Plus/Minus Query 239412 TGTACATGTGATAGGAAAAATAATTGGATTATCAAAGGGATTACATGGATTTCATATACA 239471 ||| ||| | | |||||||||| |||| | |||| ||||||||||| || ||| |||| Sbjct 24060 TGTTCATATTACTGGAAAAATAAGTGGACTTACAAAAGGATTACATGGTTTCCATGTACA 24001 Query 239472 CGAATATGGAGATTTAAGCAATGGTTGCACATCAGCTGGTGAACATTATAATCCT 239526 ||| | ||||||||| | |||||||||||||| | ||| ||||| ||||||| Sbjct 24000 TGAAAAAGGAGATTTACGAAATGGTTGCACATCTACCGGTCCACATTTTAATCCT 23946 >seq65 Length=484858 Score = 98.7 bits (108), Expect = 2e-15 Identities = 98/127 (77%), Gaps = 0/127 (0%) Strand=Plus/Minus Query 171842 ACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCTGA 171901 |||||| || | |||| ||| |||||||| |||| || || ||||||||||||||| Sbjct 17078 ACCACCCCTTAAACGTAGTACCAAATGTAATGTAGATTCCTTCTGAATATTATAATCTGA 17019 Query 171902 TAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGTGG 171961 | | | | || ||||||||||| |||||||| |||||||| ||||| ||||||| Sbjct 17018 AAGTGTCCTACCATCTTCCAATTGTTTTCCAGCAAAGATTAATCTTTGTTGACCAGGTGG 16959 Query 171962 TATTCCT 171968 |||||| Sbjct 16958 AATTCCT 16952 Score = 95.1 bits (104), Expect = 2e-14 Identities = 87/109 (80%), Gaps = 1/109 (1%) Strand=Plus/Minus Query 171962 TATT-CCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCTA 172020 |||| |||||||||||||| ||||| ||| ||||| ||||||||||| | ||| | Sbjct 16895 TATTACCTTCTTTATCTTGAATTTTTGCTTTAACATTTTCAATAGTATCTGATGCTTCGA 16836 Query 172021 CTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCAT 172069 |||| |||||||| ||||| ||||||| || || | ||||||||||| Sbjct 16835 CTTCAAGAGTAATAGTTTTGCCAGTTAGAGTCTTCACAAATATCTGCAT 16787 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 905090290632000