Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Apis_20dorsata_20[refseq_20GCF_5F000469605.1_202013-09-24] 4,040 sequences; 230,340,171 total letters Query= NC_022646.1 Length=101818 Score E Sequences producing significant alignments: (Bits) Value seq108 91.5 1e-13 >seq108 Length=811940 Score = 91.5 bits (100), Expect = 1e-13 Identities = 137/195 (70%), Gaps = 0/195 (0%) Strand=Plus/Plus Query 34786 CTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAA 34845 ||| || ||||| ||||| || |||| | || |||| || ||||| || || || || Sbjct 251229 CTCTTTTTGAATATTATAATCAGATAATGTACGTCCATCTTCTAGTTGTTTACCAGCAAA 251288 Query 34846 GATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGA 34905 ||||| || |||||| ||| | || | || |||||||| | ||||| ||| || Sbjct 251289 GATCAATCTTTGCTGATCTGGTGGAATTCCTTCCTTGTCTTGAATTTTCGCTTTTACATT 251348 Query 34906 TGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTAC 34965 | | || | || |||||| || || | ||||| || || || || | || || || Sbjct 251349 TTCAATGGTATCTGAGGCCTCTACCTCCAGAGTTATTGTTTTACCTGTCAATGTTTTGAC 251408 Query 34966 AAAGATCTGCATGAT 34980 ||||||||||||||| Sbjct 251409 AAAGATCTGCATGAT 251423 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 325676763700760