Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Apis_20dorsata_20[refseq_20GCF_5F000469605.1_202013-09-24] 4,040 sequences; 230,340,171 total letters Query= NC_025462.1 Length=99730 Score E Sequences producing significant alignments: (Bits) Value seq4 86.0 4e-12 >seq4 Length=912327 Score = 86.0 bits (94), Expect = 4e-12 Identities = 110/152 (72%), Gaps = 0/152 (0%) Strand=Plus/Plus Query 19970 TGGAATCCTCATGATGTTGCAGATGTAGATTTACCACCTTGCCATACACTATTTCAATTC 20029 |||||||| ||| || || | | | |||||| ||||| ||| | ||||||| Sbjct 866963 TGGAATCCAATCGATATTCCAAAAATGGCTTTACCTCCTTGTCATTGTTTTGTTCAATTT 867022 Query 20030 TTTGTGAAAGATGGTAAATTATCTTGCCAGTTGTATCAACGAAGTGCTGACTTATTACTT 20089 | ||| | ||| ||||||| ||||| | |||||| ||||||| || | ||| Sbjct 867023 TATGTAAGCAATGAAGAATTATCATGCCAACTTTATCAAAGAAGTGCGGATATGGGTCTT 867082 Query 20090 GGTGTTCCATTTAATATTGCATCTTATGCTTT 20121 ||||| ||||||||||||||||||||| |||| Sbjct 867083 GGTGTACCATTTAATATTGCATCTTATTCTTT 867114 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 318995492686040