Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Apis_20dorsata_20[refseq_20GCF_5F000469605.1_202013-09-24]
4,040 sequences; 230,340,171 total letters
Query= NC_026922.1
Length=157977
Score E
Sequences producing significant alignments: (Bits) Value
seq108 141 9e-29
seq31 120 3e-22
seq2544 114 1e-20
seq1683 114 1e-20
>seq108
Length=811940
Score = 141 bits (156), Expect = 9e-29
Identities = 171/230 (74%), Gaps = 2/230 (1%)
Strand=Plus/Plus
Query 134485 TTCCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGC 134544
|||| ||||| | ||||| || | ||||| || ||||| |||||||| || || ||
Sbjct 250508 TTCCACCTCTCAAACGCAATACTAAATGTAGTGTTGATTCTTTTTGAATATTATAATCCG 250567
Query 134545 CAACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCG 134604
|| || || || || |||||||| || ||||||||||| | ||| |||||||| |
Sbjct 250568 AAAGTGTACGACCATCTTCCAGCTGTTTACCAGCAAAAATCAATCTCTGTTGATCGGGAG 250627
Query 134605 GTATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAAT-GTGTCGGACGATTCC 134663
| || |||||||| || |||| |||| || | | | | |||| || ||||| | |||
Sbjct 250628 GAATACCTTCTTTATCCTGAA-TTTTAGTCTTAACATTTTCAATAGTATCGGATGCTTCA 250686
Query 134664 ACGTCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713
|| || | |||||| ||||| || || | ||| |||||||||||||||||
Sbjct 250687 ACTTCTAAAGTAATAGTTTTTCCTGTAAGAGTCTTAACGAAAATTTGCAT 250736
Score = 134 bits (148), Expect = 1e-26
Identities = 166/227 (73%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546
|| |||| ||| || | || ||||| || || ||||| |||||||| || || || |
Sbjct 248999 CCACCTCGGAGACGAAGTACAAGGTGAAGAGTCGATTCTTTTTGAATATTATAATCAGAA 249058
Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606
| || | || || | ||||| || ||||| ||||| | ||| ||||| || ||
Sbjct 249059 AGTGTACGTCCATCTTCCAATTGTTTTCCAGCAAAGATCAATCTCTGTTGATCAGGAGGA 249118
Query 134607 ATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACG 134666
|| |||||||| |||||||||||| ||| || || | ||||||||| | ||| ||
Sbjct 249119 ATACCTTCTTTGTCTTGAATTTTTGCTTTTACATTTTCAATTGTGTCGGAAGCTTCAACT 249178
Query 134667 TCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713
|| |||||||| |||||||| || | ||| || || |||||||||||
Sbjct 249179 TCAAGAGTAATAGTTTTACCCGTGAGAGTCTTGACAAAAATTTGCAT 249225
Score = 120 bits (132), Expect = 3e-22
Identities = 158/219 (72%), Gaps = 0/219 (0%)
Strand=Plus/Plus
Query 134496 AGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGA 134555
|||||||| || || || || || ||||| |||||||| || || || || || ||
Sbjct 250975 AGTCGCAAAACAAGATGAAGTGTAGATTCTTTTTGAATATTATAATCAGAAAGTGTACGA 251034
Query 134556 GAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCT 134615
|| || | ||||| || ||||||||||| | ||| |||||||| || || ||||||
Sbjct 251035 CCATCTTCCAATTGTTTTCCAGCAAAAATCAATCTCTGTTGATCGGGAGGAATACCTTCT 251094
Query 134616 TTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTA 134675
|| || |||||||| ||| || || | || || || | ||| || || | ||||
Sbjct 251095 TTATCCTGAATTTTAGCTTTAACATTTTCAATGGTATCTGAAGCTTCAACTTCTAAAGTA 251154
Query 134676 ATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCATT 134714
|| ||||| || || | ||||| || ||||||||||||
Sbjct 251155 ATAGTTTTTCCAGTAAGTGTTTTGACAAAAATTTGCATT 251193
Score = 118 bits (130), Expect = 1e-21
Identities = 157/218 (72%), Gaps = 0/218 (0%)
Strand=Plus/Plus
Query 134496 AGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGA 134555
|||||||| || || || || || ||||| ||||| || || || ||| || || ||
Sbjct 249236 AGTCGCAAAACAAGATGAAGTGTAGATTCTTTTTGGATATTATAATCGGAAAGAGTACGA 249295
Query 134556 GAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCT 134615
|| || | |||||| || ||||| |||| | ||| || || ||||| || ||||||
Sbjct 249296 CCATCTTCCAACTGTTTACCAGCAAAGATCAGTCTCTGTTGGTCAGGCGGAATACCTTCT 249355
Query 134616 TTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTA 134675
|| |||||||||||| ||| || || | | || | | ||| || || ||||||
Sbjct 249356 TTGTCTTGAATTTTTGCTTTTACATTTTCAATGGCATCATAAGCTTCAACTTCAAGAGTA 249415
Query 134676 ATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713
|| |||||||| || | ||| || || |||||||||||
Sbjct 249416 ATAGTTTTACCCGTGAGAGTCTTGACAAAAATTTGCAT 249453
Score = 118 bits (130), Expect = 1e-21
Identities = 157/218 (72%), Gaps = 0/218 (0%)
Strand=Plus/Plus
Query 134496 AGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGA 134555
||||| | ||||| || || || ||||| |||||||| ||||| ||| || || |
Sbjct 250747 AGTCGTAGAACGAGATGGAGGGTTGATTCTTTTTGAATATTGTAATCGGAAAGAGTACGG 250806
Query 134556 GAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCT 134615
|| || | ||||| || ||||| ||||| | ||| || || || || || ||||||
Sbjct 250807 CCATCTTCCAATTGTTTTCCAGCAAAGATCAATCTCTGTTGGTCAGGAGGAATACCTTCT 250866
Query 134616 TTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTA 134675
|| |||||||| || ||| || || | || ||||| | ||| || || ||||||
Sbjct 250867 TTGTCTTGAATCTTGGCTTTTACATTTTCAATGGTATCGGAAGCTTCAACTTCAAGAGTA 250926
Query 134676 ATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713
|| || || || || | |||||| ||||||||||||||
Sbjct 250927 ATAGTCTTTCCCGTAAGAGTTTTGACGAAAATTTGCAT 250964
Score = 98.7 bits (108), Expect = 1e-15
Identities = 159/229 (69%), Gaps = 0/229 (0%)
Strand=Plus/Plus
Query 134485 TTCCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGC 134544
|||| ||||| | ||||| || | ||||| || || || |||||||| || || ||
Sbjct 251192 TTCCACCTCTCAAACGCAATACTAAATGTAGTGTTGACTCTTTTTGAATATTATAATCAG 251251
Query 134545 CAACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCG 134604
| || | || || || ||||| || ||||| ||||| | |||||||| || |
Sbjct 251252 ATAATGTACGTCCATCTTCTAGTTGTTTACCAGCAAAGATCAATCTTTGCTGATCTGGTG 251311
Query 134605 GTATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCA 134664
| || ||||| || ||||||||||| ||| || || | || || || | || |
Sbjct 251312 GAATTCCTTCCTTGTCTTGAATTTTCGCTTTTACATTTTCAATGGTATCTGAGGCCTCTA 251371
Query 134665 CGTCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713
| || ||||| || |||||||| || || ||||| || || || |||||
Sbjct 251372 CCTCCAGAGTTATTGTTTTACCTGTCAATGTTTTGACAAAGATCTGCAT 251420
Score = 96.9 bits (106), Expect = 4e-15
Identities = 107/143 (75%), Gaps = 0/143 (0%)
Strand=Plus/Plus
Query 134496 AGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGA 134555
|||||||| || || || || || ||||| |||||||| ||||| ||| || || ||
Sbjct 249464 AGTCGCAAAACAAGATGAAGTGTAGATTCTTTTTGAATATTGTAATCGGAAAGAGTACGA 249523
Query 134556 GAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCT 134615
|| || | |||||| || ||||| |||| | ||| || || ||||| || ||||||
Sbjct 249524 CCATCTTCCAACTGTTTACCAGCAAAGATCAGTCTCTGTTGGTCAGGCGGAATACCTTCT 249583
Query 134616 TTTTCTTGAATTTTTTGTTTGAC 134638
|| |||||||||||| ||| ||
Sbjct 249584 TTGTCTTGAATTTTTGCTTTTAC 249606
>seq31
Length=1439309
Score = 120 bits (132), Expect = 3e-22
Identities = 168/234 (72%), Gaps = 4/234 (2%)
Strand=Plus/Plus
Query 134483 CTTTCCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTC 134542
|| |||||||| |||| ||| || | ||| || || ||||| ||||| || ||||| ||
Sbjct 960527 CTCTCCTCCTCGAAGTCTCAATACCAAGTGCAGTGTAGATTCTTTTTGGATATTGTAATC 960586
Query 134543 GCCAACGGTGTGAGAG--TCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCG 134600
|| |||| || || || ||||| || ||||||||||| || ||||||||
Sbjct 960587 T--AAGAGTGTTCTTCCATCTTCAAGTTGTTTTCCAGCAAAAATCAATCGTTGCTGATCA 960644
Query 134601 GGCGGTATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGAT 134660
|| || || |||||||| |||||||| || ||| || || | ||| || || | |
Sbjct 960645 GGAGGAATTCCTTCTTTATCTTGAATCTTAGCTTTTACGTTCTCTATTGTATCCGAAGCT 960704
Query 134661 TCCACGTCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCATT 134714
|| || || || ||||| || || || || | |||||| || || |||||||||
Sbjct 960705 TCAACTTCAAGTGTAATAGTCTTTCCAGTAAGAGTTTTGACAAAGATTTGCATT 960758
Score = 116 bits (128), Expect = 4e-21
Identities = 166/231 (72%), Gaps = 2/231 (1%)
Strand=Plus/Plus
Query 134485 TTCCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTC-G 134543
||||||| | |||||||| || || || || || ||||| || ||||| || || || |
Sbjct 960757 TTCCTCCGCGAAGTCGCAATACCAGATGAAGAGTAGATTCTTTCTGAATATTATAATCAG 960816
Query 134544 CCAACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGC 134603
| | | | | || || ||||||||||| |||||||||||||| || ||||| ||
Sbjct 960817 AGAGTGTTCTTCCA-TCTTCAAGCTGTTTGCCAGCAAAAATCAAACGTTGTTGATCAGGA 960875
Query 134604 GGTATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCC 134663
|| || |||||||| |||||||| || || || || | || || || | |||
Sbjct 960876 GGAATTCCTTCTTTATCTTGAATCTTAGCCTTTACGTTCTCTATCGTATCCGAAGCTTCA 960935
Query 134664 ACGTCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCATT 134714
|| || || ||||| || || || || | |||||| || || |||||||||
Sbjct 960936 ACTTCAAGTGTAATAGTCTTTCCAGTGAGAGTTTTGACAAAGATTTGCATT 960986
Score = 104 bits (114), Expect = 2e-17
Identities = 163/231 (71%), Gaps = 2/231 (1%)
Strand=Plus/Plus
Query 134485 TTCCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTC-G 134543
||||||||| |||| ||| || | || || || ||||| || ||||| || || || |
Sbjct 961278 TTCCTCCTCGAAGTCTCAATACCAAATGAAGAGTAGATTCTTTCTGAATATTATAATCTG 961337
Query 134544 CCAACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGC 134603
| | | | | || || || ||||| || |||||||||||||| || || || ||
Sbjct 961338 AGAGTGTTCTTCCA-TCTTCTAGTTGTTTACCAGCAAAAATCAAACGTTGTTGGTCAGGG 961396
Query 134604 GGTATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCC 134663
|| || |||||||| |||||||| || || || || | || || || | |||
Sbjct 961397 GGAATTCCTTCTTTGTCTTGAATCTTAGCCTTTACGTTCTCTATCGTATCCGAAGCTTCA 961456
Query 134664 ACGTCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCATT 134714
||||| || ||||| || || || || | |||||| || || |||||||||
Sbjct 961457 ACGTCAAGTGTAATAGTCTTTCCAGTGAGAGTTTTGACAAAGATTTGCATT 961507
Score = 102 bits (112), Expect = 8e-17
Identities = 148/209 (71%), Gaps = 0/209 (0%)
Strand=Plus/Plus
Query 134508 AGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGAGAGTCGTCGAGC 134567
|| || || || ||||| |||||||| || || || | || | || || ||
Sbjct 964777 AGATGAAGAGTAGATTCTTTTTGAATATTATAATCTGAGAGTGTTCTACCATCTTCAAGT 964836
Query 134568 TGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGAATT 134627
||||| || |||||||||||||| || ||||| || || || || ||||| ||||||||
Sbjct 964837 TGTTTTCCAGCAAAAATCAAACGTTGTTGATCTGGTGGAATTCCCTCTTTATCTTGAATC 964896
Query 134628 TTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTACCG 134687
|| || || || | |||||| || | ||| || || | || || ||||| ||
Sbjct 964897 TTAGCCTTTACATTCTCTATTGTGTCTGAAGCTTCAACTTCTAAGGTGATAGTTTTTCCT 964956
Query 134688 GTTAAAGTTTTAACGAAAATTTGCATTTT 134716
|||||||| ||||| || || ||||||||
Sbjct 964957 GTTAAAGTCTTAACAAAGATCTGCATTTT 964985
Score = 91.5 bits (100), Expect = 1e-13
Identities = 108/144 (75%), Gaps = 2/144 (1%)
Strand=Plus/Plus
Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTC-GCC 134545
|||||||| |||| |||||| | || || || ||||||||||| || || || || |
Sbjct 964322 CCTCCTCTAAGTCTCAACACTAAATGGAGTGTAGATTCCTTTTGGATATTATAATCTGAG 964381
Query 134546 AACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGG 134605
| | | | | || || |||||||| || |||||||||||||| || || || || ||
Sbjct 964382 AGAGTTCTTCCA-TCTTCTAGCTGTTTACCAGCAAAAATCAAACGTTGTTGGTCAGGGGG 964440
Query 134606 TATGCCTTCTTTTTCTTGAATTTT 134629
|| |||||||| |||||||| ||
Sbjct 964441 AATTCCTTCTTTGTCTTGAATCTT 964464
Score = 89.7 bits (98), Expect = 5e-13
Identities = 109/146 (75%), Gaps = 2/146 (1%)
Strand=Plus/Plus
Query 134485 TTCCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTC-G 134543
||||||||| |||| ||| || | || || || ||||| || ||||| || || || |
Sbjct 960985 TTCCTCCTCGAAGTCTCAATACCAAATGAAGAGTAGATTCTTTCTGAATATTATAATCTG 961044
Query 134544 CCAACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGC 134603
| | | | | || || || ||||| || ||||||||||| ||||||||||| ||
Sbjct 961045 AGAGTGTTCTTCCA-TCTTCAAGTTGTTTTCCAGCAAAAATCAATCGCTGCTGATCAGGA 961103
Query 134604 GGTATGCCTTCTTTTTCTTGAATTTT 134629
|| || |||||||| |||||||||||
Sbjct 961104 GGAATTCCTTCTTTATCTTGAATTTT 961129
>seq2544
Length=277
Score = 114 bits (126), Expect = 1e-20
Identities = 156/218 (72%), Gaps = 0/218 (0%)
Strand=Plus/Minus
Query 134496 AGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGA 134555
|||||||| || || || || || ||||| |||||||| ||||| ||| || || |
Sbjct 273 AGTCGCAAAACAAGATGAAGTGTAGATTCTTTTTGAATATTGTAATCGGAAAGAGTACGG 214
Query 134556 GAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCT 134615
|| || | ||| || || ||||| |||| | ||| ||||| || || || |||||
Sbjct 213 CCATCTTCCAACTGCTTACCAGCAAAGATCAGTCTCTGTTGATCCGGAGGAATACCTTCC 154
Query 134616 TTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTA 134675
|| ||||||||||| ||| || || | ||| || || | ||| || || | ||||
Sbjct 153 TTATCTTGAATTTTAGTTTTAACATTTTCAATTGTATCAGAAGCTTCAACTTCTAAAGTA 94
Query 134676 ATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713
|| ||||| || || | |||||| || || ||||||||
Sbjct 93 ATTGTTTTTCCAGTAAGAGTTTTTACAAATATTTGCAT 56
>seq1683
Length=220
Score = 114 bits (126), Expect = 1e-20
Identities = 155/216 (72%), Gaps = 0/216 (0%)
Strand=Plus/Minus
Query 134496 AGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGA 134555
|||||||| || || || || || ||||| ||||| || || || || || || ||
Sbjct 216 AGTCGCAAAACAAGATGAAGTGTAGATTCTTTTTGGATATTATAATCAGAAAGAGTACGA 157
Query 134556 GAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCT 134615
|| || |||||||| || ||||||||||| | || || || || || || ||||||
Sbjct 156 CCATCTTCCAGCTGTTTACCAGCAAAAATCAATCTTTGTTGGTCAGGGGGAATACCTTCT 97
Query 134616 TTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTA 134675
|| ||||||||||| || || || | || || || | ||| || || ||||||
Sbjct 96 TTGTCTTGAATTTTAGCCTTAACATTTTCAATAGTATCAGAAGCTTCAACTTCAAGAGTA 37
Query 134676 ATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGC 134711
|| ||||| || || | ||| || ||||||||||||
Sbjct 36 ATAGTTTTTCCTGTAAGAGTCTTGACGAAAATTTGC 1
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 505372877380800
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