Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Apis_20dorsata_20[refseq_20GCF_5F000469605.1_202013-09-24] 4,040 sequences; 230,340,171 total letters Query= NC_033423.1 Length=208501 Score E Sequences producing significant alignments: (Bits) Value seq205 120 4e-22 seq4 93.3 6e-14 >seq205 Length=424314 Score = 120 bits (132), Expect = 4e-22 Identities = 199/285 (70%), Gaps = 2/285 (1%) Strand=Plus/Minus Query 156164 AAACAATCGTCTGACGTTAGCTTCCGATTCACCCACATATTTGTTTAATAATTCAGGACC 156223 ||| |||| ||| | || ||||| ||| || |||||||| | || | || |||||| Sbjct 262358 AAATAATCTTCTAATATTGGCTTCACTTTCTCCGACATATTTATCCAAGATTTGAGGACC 262299 Query 156224 GTTAACTATTTTGACGGGTCGTG-ATTTAAAAGCTTGAGCGATACAGCGAGCCATTAATG 156282 ||||| ||||| || | |||||| | | | || | ||||||||||| Sbjct 262298 ATTAACAATTTTAGGTTCTCTAGCATTTAACATAGTTC-CTATTTGTCTAGCCATTAATG 262240 Query 156283 TTTTACCGCACCCAGGAGGTCCGTATAACAATACTCCTTTTATATGTTTACAACCTAATT 156342 |||| || || || || || || | || | |||||| | ||||||||||||||||| Sbjct 262239 TTTTTCCTGTTCCTGGTGGACCATAAAGTAAAATTCCTTTCACATGTTTACAACCTAATT 262180 Query 156343 TTTCAGTTATTTCTACCGGAACTGATCTGGAAGCAAATGCTCTTCGAAAAATGAGAGAAA 156402 | | || ||| ||||| || ||| ||||| |||||||||||||| || || Sbjct 262179 GTGTAACAATCTCTGGCGGAAAAACTCGGGATGCAAAGGCTCTTCGAAAAATAGCAGTAA 262120 Query 156403 ATTCTTTATCCAATCCCCCCACACCCATTTCCTCAAAATTCCAAT 156447 |||||||||||| ||| || | ||||||| | ||||| ||||| Sbjct 262119 ATTCTTTATCCAGTCCACCAATTCCCATTTTTTGAAAATCCCAAT 262075 >seq4 Length=912327 Score = 93.3 bits (102), Expect = 6e-14 Identities = 126/173 (73%), Gaps = 2/173 (1%) Strand=Plus/Plus Query 50619 ATTTTAATGACCGCCTGGAATCCAACCGATATAGATCAAACCGTTTTACCTCCGTGTCAT 50678 ||| ||||||| || |||||||||| |||||| ||| | ||||||||| |||||| Sbjct 866948 ATTATAATGACAGCATGGAATCCAATCGATATTCCAAAAATGGCTTTACCTCCTTGTCAT 867007 Query 50679 -GTTTTATGTCAATTTTATGCCACAGACAATGTTTTATCCTGTCAATGTTATCAAAGATC 50737 ||||| | ||||||||||| | | | | ||||| || ||| |||||||||| Sbjct 867008 TGTTTTGT-TCAATTTTATGTAAGCAATGAAGAATTATCATGCCAACTTTATCAAAGAAG 867066 Query 50738 AGCTGATATGGGTTTAGGCGTTCCTTTCAACGTAGCTTCTTACGCTTTATTAA 50790 || ||||||||| | || || || || || | || ||||| |||| |||| Sbjct 867067 TGCGGATATGGGTCTTGGTGTACCATTTAATATTGCATCTTATTCTTTGTTAA 867119 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 667041512702400