Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Apis_20florea_20[refseq_20GCF_5F000184785.2_202012-12-07] 7,946 sequences; 230,485,475 total letters Query= NC_001132.2 Length=161773 Score E Sequences producing significant alignments: (Bits) Value seq2024 122 9e-23 >seq2024 Length=8919894 Score = 122 bits (134), Expect = 9e-23 Identities = 145/197 (74%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 16792 TAATCTATCCGCTACAAATTCTATATATTGGCACATTAATTCGCAGTTCATTCCTATAAG 16851 ||||||||| || |||||||| |||||||| ||||| | || |||||||| ||||| | Sbjct 2395986 TAATCTATCTGCAACAAATTCGATATATTGACACATAAGTTTACAGTTCATGCCTATCAT 2396045 Query 16852 ACGTACCGGAAGAGCTTCCGTCAAAAATCGTTGCTCTATAACAACCGCTTCCTTAATAAT 16911 || || | || || || |||||| ||| || || ||| || ||||||||||| Sbjct 2396046 TTCAACAGGTAATGCATCTGTTAAAAATTCTTGTTCAATTTTAACAGCATCCTTAATAAT 2396105 Query 16912 ACTAGCAACTCGTTCCTCGGACGGTGTATGTTTAAGATGTTTAAACATCAGACATGCGAA 16971 | ||||||||| || ||| | ||| || ||||| ||||| | |||||| || Sbjct 2396106 TGATGTAACTCGTTCACAAGATGGTTTTTGTACAATGTGTTTGAACATTAAACATGCAAA 2396165 Query 16972 ATCGCAATGTAATCCCT 16988 ||| ||||||||||||| Sbjct 2396166 ATCACAATGTAATCCCT 2396182 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 517494194783280