Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Apis_20florea_20[refseq_20GCF_5F000184785.2_202012-12-07] 7,946 sequences; 230,485,475 total letters Query= NC_001350.1 Length=112930 Score E Sequences producing significant alignments: (Bits) Value seq1883 120 2e-22 >seq1883 Length=454209 Score = 120 bits (132), Expect = 2e-22 Identities = 183/261 (70%), Gaps = 0/261 (0%) Strand=Plus/Minus Query 102005 CCTTCTCCTTTATAATCGCGCCCAACACCTTTATATTCTGCTCCGAAATGCCTCCACTGA 102064 |||||||| |||||||| | | |||||||| ||| || ||||| ||||| ||| Sbjct 61306 CCTTCTCCATTATAATCTTTGTACATATCTTTATATGTTGCACCAAAATGTCTCCATTGA 61247 Query 102065 AATCCATACACAGGTCCAAGATCTCCTTCATCTCTGTCATAAAAACCAAGTTTATCTAAA 102124 |||||||| | ||| || | ||||||||| || || || ||||||| |||||| Sbjct 61246 AATCCATAAATAGGACCTAAATCTCCTTCTTCCCTATCTGTAAAACCACAAGAATCTAAG 61187 Query 102125 AATGATCTAGATCCATTCGCATCCCAAATGTGCACGCCAGCTGCTGATAGCTCTTTGCTG 102184 || | || | ||||||||||||||| || || | | | || | ||| Sbjct 61186 AACTCACGTGAACTATTCGCATCCCAAATATGAACATCCTTTTCGCTTAATTTTTTAGCA 61127 Query 102185 TCAGTAGATCCTCTGATAAACCACAACAGTTCTTCAACAACACCTCTCCAAAATACTCTC 102244 | || ||||| | || ||||| || | |||||| || |||||| |||||||||| | Sbjct 61126 TTTGTGGATCCATTAATGAACCATAATAATTCTTCCACTACACCTTTCCAAAATACGCGT 61067 Query 102245 TTAGTAGTTAAAAGTGGAAAT 102265 || |||||||| | ||||||| Sbjct 61066 TTTGTAGTTAATAATGGAAAT 61046 Score = 93.3 bits (102), Expect = 3e-14 Identities = 144/206 (70%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 101750 TTAGTGACATGAGCAATCATGCAAGTTAAAAGAGAATAGCTAGCAATGTTAAATGGCACT 101809 || || | ||| || | ||| || |||| | |||||| ||||| |||||||| || Sbjct 61643 TTTGTAATATGTGCCAGCATATAAATTAATAAAGAATAAGATGCAATATTAAATGGTACA 61584 Query 101810 CCTAACCCCATATCAGCTGATCTTTGATACAGTTGACAGGAAAGCTTTCCATCACAGACA 101869 || | |||||||| || ||||||||| ||||| || || | | | ||| | ||| Sbjct 61583 CCAAGACCCATATCCGCACTTCTTTGATAAAGTTGGCATGATAATTCTTCATTGCTTACA 61524 Query 101870 TAAAATTGACTTAATACATGACAAGGCGGCAACACCATTTTAGGAATGTCTGAAACATTC 101929 ||||||||| || ||||||||| || || ||||||| ||||| || |||| Sbjct 61523 TAAAATTGAACAAAACAATGACAAGGAGGTAAAGCCATTTTTGGAATATCAATTGGATTC 61464 Query 101930 CAAGCACACATTAACATCCTTCTATC 101955 || || ||||| || |||||||| Sbjct 61463 CATGCTGTCATTATAATTCTTCTATC 61438 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 361216215756446