Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Apis_20florea_20[refseq_20GCF_5F000184785.2_202012-12-07] 7,946 sequences; 230,485,475 total letters Query= NC_002486.1 Length=45636 Score E Sequences producing significant alignments: (Bits) Value seq6626 104 7e-18 >seq6626 Length=1819 Score = 104 bits (114), Expect = 7e-18 Identities = 143/200 (72%), Gaps = 0/200 (0%) Strand=Plus/Plus Query 23917 AAATATGAAGAACAAAAATCGATTCTTAAAGATAGAAATAGCTTTTCTAAAACTGATCAT 23976 |||||||||||| | || || || |||| | | | ||||| || ||||| ||||| || Sbjct 888 AAATATGAAGAATACCAAGCGCTTTTTAAGGGTCGCAATAGTTTCTCTAAGACTGACCAC 947 Query 23977 GATGCAACTTTTATGAGAATGAAGGAAGACCATATGAAAAATGGCCAACTTAAGCCAGGA 24036 ||||| || |||||| | ||||||||||||| ||| || || || || ||||| || Sbjct 948 GATGCCACCTTTATGCGCATGAAGGAAGACCCGATGCTTAACGGGCAGCTAAAGCCGGGC 1007 Query 24037 TACAATTTACAAATAGCGACAAATTCTCAATTTGTTTTATCCTATGACCTATTTCAAAAC 24096 |||||| | || | ||||| | ||| | |||| | |||| ||| | || ||| Sbjct 1008 TACAATCTGCAGGTTGCGACCAGCAATCAGTATGTTATTGATTATGCCCTGTATCCTAAC 1067 Query 24097 CCGACAGATACTAGAACTTT 24116 || || || || ||||| || Sbjct 1068 CCAACTGACACCAGAACCTT 1087 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 145899831775096