Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Apis_20florea_20[refseq_20GCF_5F000184785.2_202012-12-07] 7,946 sequences; 230,485,475 total letters Query= NC_004305.1 Length=42259 Score E Sequences producing significant alignments: (Bits) Value seq5105 80.6 7e-11 >seq5105 Length=1428 Score = 80.6 bits (88), Expect = 7e-11 Identities = 58/66 (88%), Gaps = 1/66 (2%) Strand=Plus/Minus Query 2594 GCGAGTGTAGTTTAGTGGTAAAACGATAGCCTTCCAAGCTGTAGTCGCGGGTCCGATTCC 2653 ||| || | ||||||||||||||||| ||||||||||||| |||||||| ||||||||| Sbjct 1408 GCGGGTATGGTTTAGTGGTAAAACGA-AGCCTTCCAAGCTTTAGTCGCGAGTCCGATTCT 1350 Query 2654 CGTCAC 2659 ||| || Sbjct 1349 CGTTAC 1344 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 135094451453492