Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Apis_20florea_20[refseq_20GCF_5F000184785.2_202012-12-07] 7,946 sequences; 230,485,475 total letters Query= NC_006883.2 Length=252401 Score E Sequences producing significant alignments: (Bits) Value seq1062 93.3 7e-14 >seq1062 Length=8770477 Score = 93.3 bits (102), Expect = 7e-14 Identities = 158/229 (69%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 193881 GCAAAGTTGTATGGTTATTGGATCATCAAGAATTATCGTGAGTCATATGGATTCCACGCT 193940 ||||| || ||| ||| ||||||| | | |||||| | || ||||| | ||| Sbjct 8081878 GCAAAATTATATAGTTTTTGGATCGTAATAAATTATAGAGAAGCATATAATATGTTTGCT 8081819 Query 193941 AGTTCTGGTATTCTCTTCAATCACGAATCTCCAAGAAGAGGTGAGACATTTGTAACTCGT 194000 || ||||||| | || ||||| ||| ||| | ||||| |||| ||||| || | Sbjct 8081818 TGTAATGGTATTTTATTTAATCATGAAAGTCCTCGTAGAGGAGAGAATTTTGTTACAAGA 8081759 Query 194001 AAGATTACACAAGGTTTATCTAAGATCTCTGTTGGATTACAGAAGATTCTTTATCTTGGT 194060 || | || | | || | ||||| | |||| ||||| | |||||| | | || Sbjct 8081758 AAAGTGACCAGATCTATAGCAAAGATACATCTTGGTTTACAAGACATTCTTGAATTAGGA 8081699 Query 194061 AATCTTAATGCTAAGAGGGATTGGGGACACGCAAAGGATTATGTTGAAG 194109 ||| | ||||||| | ||||||||||| ||||| ||||||||||||| Sbjct 8081698 AATTTAGATGCTAAACGAGATTGGGGACATGCAAAAGATTATGTTGAAG 8081650 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 807474989579760