Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Apis_20florea_20[refseq_20GCF_5F000184785.2_202012-12-07] 7,946 sequences; 230,485,475 total letters Query= NC_007047.1 Length=39620 Score E Sequences producing significant alignments: (Bits) Value seq4744 87.8 5e-13 >seq4744 Length=1121 Score = 87.8 bits (96), Expect = 5e-13 Identities = 198/294 (67%), Gaps = 3/294 (1%) Strand=Plus/Plus Query 28243 TATTTGCAGATGCAGTAGCTACTACTAA-GACATCAATTTTAGTTGGAGAGTTAGCAAAG 28301 ||||||||||| |||| | | | | | |||| | || |||||||| || | || ||| Sbjct 505 TATTTGCAGATACAGTTTCAGCAAGTGATGACA-CTATCTTAGTTGGTGAACTTGCCAAG 563 Query 28302 ATCATTAAACAAAACGGTATAAACATCGGGCAACGCAGATTGTTTGAGTGGTTACGTCAA 28361 || | ||| || ||| |||| || || ||| || | ||| ||||| | ||| | Sbjct 564 ATTTTGAAAGGCAAAGGTGTAAATATTGGCCAAAATAGGCTTTTTAAGTGGATGCGTGAT 623 Query 28362 AACGGATTCCTTATTAAACGCAAGGGTGTGGATTACAACATGCCTACACAGTATTCAATG 28421 || || | | || || || | ||| || ||| | || || || | || ||| Sbjct 624 AATGGCTATTTGATAAACCGGAGGGGCAGTGACCGCAATGTTCCGACTCAAAAGTCTATG 683 Query 28422 GAACGTGAGTTATTCGAAATTAAAGAAACATCAATCACACATTCGGACGGTCACACATCA 28481 ||| | ||||| | |||||||||||| ||||| ||| | || ||| | || Sbjct 684 GAAATGGGACTATTC-AGATTAAAGAAACAGTAATCAATCATCCTGATGGTAAGCCAAGT 742 Query 28482 ATTAGTAAGACACCAAAAGTAACAGGCAAAGGACAACAATACTTTGTTAACAAG 28535 ||||| ||||| ||||||||||| || ||||| || | || ||||| |||||| Sbjct 743 ATTAGAAAGACGCCAAAAGTAACTGGTAAAGGCCAGCGCTATTTTGTGAACAAG 796 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 126650448294264