Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Apis_20florea_20[refseq_20GCF_5F000184785.2_202012-12-07] 7,946 sequences; 230,485,475 total letters Query= NC_011345.1 Length=155122 Score E Sequences producing significant alignments: (Bits) Value seq7885 113 4e-20 >seq7885 Length=810 Score = 113 bits (124), Expect = 4e-20 Identities = 153/211 (73%), Gaps = 2/211 (1%) Strand=Plus/Plus Query 138405 AACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTC 138464 ||| | ||| | | |||| || |||||||| || || ||| | |||||| || || Sbjct 538 AACGAGATGGAGGGTTGATTCTTTTTGAATATTATAATCGGAAAGAGTACGACCATCTTC 597 Query 138465 GAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGT 138524 | |||||| || | | |||| | | ||||||||| ||||| |||||||||||||| | Sbjct 598 TAATTGTTTTCCAGCAAAGATCAATCTCTGTTGGTCGGGAGGAATACCTTCTTTGTC-TT 656 Query 138525 GATTTTTTG-TTTTAATTGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTT 138583 || |||| | ||||| | ||| | ||| |||| | || || || | || | |||| Sbjct 657 GAATTTTGGCTTTTACATTTTCAATGGTATCGGAAGCTTCAACTTCCAGAGTAATAGTTT 716 Query 138584 TACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614 |||| || |||||||| |||||||| ||||| Sbjct 717 TACCCGTAAGAGTTTTAACAAAAATTTGCAT 747 Score = 102 bits (112), Expect = 8e-17 Identities = 161/228 (71%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447 || |||| |||||||| |||||||||| |||| || |||||||| || || || Sbjct 66 CCACCTCTCAAACGCAGTACTAAATGTAGTGTTGATTCTTTTTGAATATTATAATCCGAA 125 Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507 | ||||| || ||||| |||||||| | | | || | | ||| || || || || Sbjct 126 AGTGTACGACCATCTTCGAGCTGTTTACCAGCAAAAATCAATCTCTGCTGATCTGGTGGA 185 Query 138508 ATACCTTCTTTGTCGGTGATTTTTTGTTTTAAT-TGTTCCACGGTGTCGGTCGACTCCAC 138566 |||||||| || || ||| |||| ||||||| | ||| | || || | | || || Sbjct 186 ATACCTTCCTTATCT-TGAATTTTAGTTTTAACATTTTCAATTGTATCAGAAGCTTCAAC 244 Query 138567 CTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614 || | || | ||||| ||||| |||||||||||||| || ||||| Sbjct 245 TTCTAAAGTAATTGTTTTTCCAGTAAGAGTTTTTACAAATATTTGCAT 292 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 496213108737120