Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Apis_20florea_20[refseq_20GCF_5F000184785.2_202012-12-07] 7,946 sequences; 230,485,475 total letters Query= NC_011801.1 Length=38934 Score E Sequences producing significant alignments: (Bits) Value seq4744 158 3e-34 >seq4744 Length=1121 Score = 158 bits (174), Expect = 3e-34 Identities = 371/552 (67%), Gaps = 16/552 (3%) Strand=Plus/Plus Query 27575 ACAGTAATTGTTAACGAATCTGGCCTTTACAGCTTAATTCTTTCCAGCAAGTTACCAACA 27634 ||||||||| ||||| ||||| || || ||||||||| | ||||| | || Sbjct 258 ACAGTAATT---AACGAGTCTGGTCTCTATAGCTTAATTATGAGTAGCAAAATGCCTGAG 314 Query 27635 GCCAAGAAGTTTAAGCACTGGGTAACTAGTGAAGTCTTACCTGCAATCCGCAAGCACGGT 27694 || |||| |||||| || ||||| || ||||| || ||||| || || | |||| || Sbjct 315 GCTAAGAGGTTTAAACATTGGGTTACAAGTGAGGTATTACCAGCTATTAGACAGCATGGA 374 Query 27695 GCTTATATGACCGATGAAAAGGCATTTGATGTAGTTAACAATAAGTCAGGCCTTGCAGAT 27754 || || | || || | || || || ||| | ||| || ||| ||||| || | Sbjct 375 GCGTACCTTACTGACCAGAAAGCCTTGGATATTATTACTAACAAGGACGGCCTAGCTGGC 434 Query 27755 CTATTACAACAAGCTGCAGATCAGCTCAAGCAAAAGGACATTCAAATT--GCTGAAATGA 27812 || | | |||||||| || ||||| | ||||| || || |||||| || | || Sbjct 435 CTGCTTAAGCAAGCTGCTGACCAGCTTGAACAAAAAGATATCCAAATTAAGCGGT--TGG 492 Query 27813 AGCCTAAAGCACTGTTTGCTGATAGCGT---AGCAACTTCAAACTCAACGATTTTAGTCG 27869 | |||||||| || ||||| |||| || ||||| | || || || ||||| | Sbjct 493 AACCTAAAGCTCTATTTGCAGATACAGTTTCAGCAAGTGATGAC---ACTATCTTAGTTG 549 Query 27870 GTGAATTAGCTAAGATTTTGCGTGGTAACGGCATTGAGATTGGTCAGAACAGATTGTTCG 27929 ||||| | || ||||||||| || || || | | ||||| || || || | || Sbjct 550 GTGAACTTGCCAAGATTTTGAAAGGCAAAGGTGTAAATATTGGCCAAAATAGGCTTTTTA 609 Query 27930 ATTGGCTGAGAAAGAATGGCTACTTGATTTCCAAGAAAGGTAGTAGTTACAACTTACCGA 27989 | ||| || | | |||||||| ||||| | || || ||| ||| | |||| Sbjct 610 AGTGGATGCGTGATAATGGCTATTTGATAAACCGGAGGGGCAGTGACCGCAATGTTCCGA 669 Query 27990 CACAAAAGTCTATGAACCTTGGTTTATTCAAGATTAAAGAAACAACCATCAATCATAGCA 28049 | |||||||||||| | | || |||||| ||||||||||||| ||||||||| Sbjct 670 CTCAAAAGTCTATGGAAATGGGACTATTCA-GATTAAAGAAACAGTAATCAATCATCCTG 728 Query 28050 ATGGCTCAG-TATCAATCAGCAAGACCGCTAAGGTTACTGGAAAAGGTCAACAATACTTT 28108 |||| | || | || || ||||| | || || ||||| ||||| || | || ||| Sbjct 729 ATGG-TAAGCCAAGTATTAGAAAGACGCCAAAAGTAACTGGTAAAGGCCAGCGCTATTTT 787 Query 28109 ATTAACAAGTTC 28120 | |||||| || Sbjct 788 GTGAACAAGCTC 799 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 124455455430592